Cuculus canorus (common cuckoo): 104060924
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Entry
104060924 CDS
T08597
Symbol
AP3D1
Name
(RefSeq) AP-3 complex subunit delta-1 isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104060924 (AP3D1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104060924 (AP3D1)
Membrane trafficking [BR:
cuca04131
]
Endosome - Lysosome transport
Others
AP-3 complex
104060924 (AP3D1)
Endosome - Golgi transport
104060924 (AP3D1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
INTS1_R4
RTP1_C1
RasGEF_N_2
Vac14_Fab1_bd
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
104060924
NCBI-ProteinID:
XP_053905870
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All DBs
Position
27:3958366..4002439
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AA seq
1222 aa
AA seq
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MALKMVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISQCIDEIKQELKQDNIAVKANAVC
KLTYLQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMIHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMAMLLDNAHLIASNTQRNGICE
VLYAAAWICGEFSEHLEEANQTLEAMLRPKVTTLPGHIQAVYVQNMVKLYASILQQKEQS
GEKEAAQEITQLMIERLPQFVQSADLEVQERASCILQLIKYIQKLQIKEVPVAEEVIALF
AGELNPVAPKAQKKVPVPEGLDLDAWINEPPSDSESEDEKPKTIFHDEEQRHRHRQPEMD
EEELARRREARKQEQANNPFYIKSSPSPQKRYQDTPGVEHIPVVQIDLSVPLKVPGMPMS
DQYVKLEEERRHKQKLEKDKKKKKQKKEKRGKHHRHNSLHTESEEDIAPAHHVDIITEEM
PENALPSDEDDKDPNDPYKALDIDLDNLVSGKPSRPLADSEKLPVQRHRNVEALKSPDSE
APPVEKKSKKPKKKEKKHKEKEREKGKKKEKEKKVVEEEERKKEEDLDFWLSTAPPPAPT
TQPQSEPEASAAVVAEPQEVKREEREEHEEEEDEGKKSSKHKKKKHKKEKEEKSKDRKKS
KKKSHHSEEETAESVQNGTLEDEPLPPMSSYRLLAENPYVKMTYDIQGNLQNDSQVTVSV
IFENKSTSFLKSMELNVLDSLNTKMLRPEGSSVHDGIPVPFQLPPGISNEAQFVFTLQSI
VMAQKLKGTLSFIVKNDEGSTHEKLDFKLHFSCASYLITTPCYSDAFAKLLESGDLHMSS
IKLDGISISFQHLLAKICFHHHFSVVERVDSCASMYSRSIQGHHVCLLVKKGENSVSIDG
KCSDSTLLSNLLDEMKETLSKC
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaagatggtgaagggcagcatcgaccgtatgtttgacaagaacctgcaagac
ctggtgcgcgggatccgcaaccacaaggaggatgaggcgaaatacatttcccagtgcatc
gatgagatcaagcaggagctgaagcaggataacattgcagtgaaagcaaatgccgtctgc
aaactcacctatttgcagatgctgggctacgacatcagctgggctgctttcaatattatt
gaagtcatgagtgcgtcgaagtttacattcaaaagaatcggttacctggctgcctcacag
tgttttcatgaaggaactgatgtcattatgttgaccactaaccagatccgaaaggatctg
agtagccctaaccaatatgatactggagttgcactgactggcttgtcctgttttgttact
ccagatcttgccagggacttggcaaatgacatcatgacactgatgtcccatacaaagcct
tatatcaggaagaaggcagtgttaatcatgtacaaagtgtttttgaaatacccagagtcc
ctccgtcctgcgtttcctcgccttaaagagaaacttgaagatccagatcctggtgtgcag
tctgctgcagtaaatgttatttgtgagctggctcgacgcaatcccaaaaactacctttcc
cttgctccgctctttttcaagttgatgacgtcgtcaaccaataattgggttctcattaag
attataaaactgtttggtgctcttactccgttagaacctaggctgggcaagaaactgatt
gagcctctgaccaacctcatccacagcacctcagccatgtctctcctatatgaatgtgtg
aacacagtaatagcagttctgatctccctgtcctctgggatgcccaatcacagcgccagc
atccagctttgtgttcagaagttaaggatattgatagaagattctgaccagaacttgaaa
tacctgggactgctggctatgtccaaaatcctcaaaacgcatcctaaatcagttcagtct
cacaaggatctcattctccaatgtctggatgacaaggatgagtctatccgactcagggct
ttagatctcctctacggcatggtgtcgaagaagaacttgatggagatagtgaagaaactg
atgattcacgtggataaagcagaagggacaacgtaccgggatgagctgctgaccaaaatc
atagatatttgtagtcagtccaattatcaatatatcacaaactttgaatggtacatcagt
atcttggtggagctgacccggctagaaggcacacggcatgggcatctcatagcagctcag
atgttggatgtagctatcagagttaaagctattcggaaatttgcggtttctcaaatggcc
atgctcctggacaacgctcacctcatagccagcaacacccagagaaatgggatctgcgag
gtgctttatgctgctgcgtggatatgtggggagttctctgaacacctcgaggaagcaaat
caaactctagaagcaatgttgaggcctaaagttacaactctaccaggccacatccaggcg
gtttatgtgcagaacatggtaaagctctatgcatccatcctgcagcagaaagagcagtct
ggggaaaaggaagcagctcaagaaatcacacagctgatgattgagcgtttgcctcagttt
gtgcagagtgcagacctagaagttcaggagagggcttcttgcatcttgcaactaataaaa
tatattcagaagctacaaataaaagaagtccctgtagctgaggaagtaatagctttgttt
gctggcgagctgaaccctgtggctcccaaagcacagaagaaagtgccagttccagagggc
ttggacctcgatgcctggatcaatgaacctccatcagacagcgaatctgaagatgaaaaa
cctaaaacgatttttcatgatgaggagcaaagacacagacacagacagccagaaatggat
gaagaggaactggccagacgtcgggaggcccggaaacaagaacaggcaaacaacccattt
tatattaaaagctctccttctccccagaagcgataccaggacactccaggtgtggaacat
atacctgtggtccagatcgacctttctgtccccttaaaagttccaggaatgcccatgtct
gaccagtatgtgaaactggaagaagagcggagacacaaacagaaactggagaaagacaag
aaaaagaaaaagcagaaaaaggaaaagagaggtaaacatcatcgccacaactctctgcac
acggagagtgaggaggatattgctccagctcaccatgtcgatatcataacagaagagatg
ccagagaatgctttgcccagcgatgaagatgacaaagatcccaatgatccatacaaggca
cttgatatcgatctggataatctggtttcagggaagccttccagacctttagcagacagc
gagaagctgccagtgcagagacacagaaacgttgaggccctgaagtcaccagactcagaa
gctcccccggtggagaagaagagcaagaaacccaaaaagaaggaaaagaaacacaaagaa
aaagagagagagaaaggaaagaagaaagagaaggagaaaaaggtggtagaagaggaagaa
agaaagaaggaggaggacttggatttctggctctccactgctccgccacctgctcccact
acccagccacagagtgagcctgaagcgagtgctgctgttgtggctgaacctcaagaggta
aaaagagaagaaagggaagagcatgaggaggaggaggatgaaggaaagaaatcctccaag
cataagaagaaaaagcacaagaaagagaaggaagagaaatcgaaggatagaaagaaatcc
aaaaagaagagtcatcacagtgaggaggagacagcagagtcggtgcagaatggaacacta
gaagatgaaccactaccaccgatgtccagttaccgccttctcgctgaaaacccatacgtt
aaaatgacgtatgatattcaaggcaacctccagaacgatagccaagttactgtctctgtt
atctttgagaacaaaagcactagcttccttaagagcatggaactaaatgtcctggactct
ctcaacactaaaatgctccgaccagaaggatcatcagtacacgatgggatacctgtgccc
ttccagctcccccctggaatctctaatgaagcccagtttgtgtttacacttcagagtatt
gttatggctcagaagttaaaaggaacactgtcctttatagtcaaaaatgatgaaggttca
acccatgaaaaactagatttcaaattgcacttcagttgcgcttcatacttgatcacgacg
ccttgctatagtgatgcttttgccaagctcctggagtctggagacctgcacatgagttct
attaaattagatggtattagcatttctttccaacatctactggcaaagatctgttttcat
catcatttttcagttgtggaacgtgttgattcgtgtgcatccatgtacagtcgttctatc
caaggccatcatgtctgcctactggtaaaaaagggagagaactctgtatccatagatggg
aaatgcagtgattccaccctgcttagcaacttgttggatgagatgaaagagacattgtcc
aagtgctga
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