Cuculus canorus (common cuckoo): 104060936
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Entry
104060936 CDS
T08597
Symbol
CHAF1A
Name
(RefSeq) chromatin assembly factor 1 subunit A isoform X1
KO
K10750
chromatin assembly factor 1 subunit A
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104060936 (CHAF1A)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104060936 (CHAF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1-p150_C2
CAF1A_acidic
CAF1-p150_N
CAF1A_dimeriz
Motif
Other DBs
NCBI-GeneID:
104060936
NCBI-ProteinID:
XP_053905875
LinkDB
All DBs
Position
27:4300674..4316243
Genome browser
AA seq
1028 aa
AA seq
DB search
MGTARASSSATAPEAAATPGQPAAPPNYNSHSPSRQLRVRSAPAHRSSNASLASGAAAIS
RPGSGPFRGAARCGVRLRPSARCLGEQAGLEPRTMECRDKAALPARKLVQARLPFKRLNP
VPKEKCDADSEIKKIKSSQSGFGPSKDSSLDASHVSLDDVENDCQLDSEVNFTPKLVNRK
GPLDYFIQKNTKGNTNEPVIVIDLTKDSGHRLGDAVDDTDFDSKASSSIAIANGTLGKET
NQLSCLNSTQSSQMDDSMETDVPCEAVEDKGEGLVDGIQSYSGLTECNNMENRKLNQSEL
KDVIFEGKMPVVLLEDIMTTKSSQLASLDGSFMSENETMESSHEGDSGLTNSPLSSRSVS
SPESQPAAETKRNTSPSAASTPVRKVSQKCHKSSAEKEKLRLQRDQERAGKLQKLQAERE
EKGRLKEEAKAAKERAKEEAKKKKEEEKELKEKERREKKEKEEKEKAEKLRVKEEKRKEK
QEALEAKLEEKRKKEEEKRLREEEKRINAQKAEITRFFQKPKTPQAPKILAGSCGKFAPF
EIKENMVLAPLCRIALDPDLEQLDKLLRTQNSNISYLRDLKCRKPRKTGPTFVSSSAGTV
NSDVVVVVDNCKTDAVPERGKFGRMKLLQFCENHRPAYWGTWNKKTTVIRPRNPWSKDSK
LLDYEVDSDEEWEEEEPGESLSHSEGDDEEEGEDEDDDDGFFVPHGYLSEDEGVTEECDP
ENQKVRQKLKAKEWDELMAKGKRLHVLQSVKIGCIWESTGNDSSTSSDLKVLQQFTACIL
DSPVAEEEQQIEKCSKKRAKDQQILGQLLPLLHGNVNGSKVIIQEFQECCRQGLFGDVTA
AANCSDTSPVSPHTSRPQTPVGEDSGVPSKARLKRIISENSVYEKRPEYRMCWYVHSEVL
KSFDQEHLPVPCQWNYVTQVPSSGKEEGGSVPGMTVLQTTPMPVKRKPTGSMSITKFMKR
PRDAEQAEAAELDGFQADTEEDEDDDCMIVDIQPCKDSTLTVPETASERGGTGATHQDTS
TVSPSNTV
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagcacgtgcctcctcatctgccacagcaccggaggcggctgctaccccaggc
caaccagcggcaccgccgaactacaactcccacagtccctcgcggcagctgcgcgtccgc
tccgcgcctgcgcaccgcagcagcaatgcctcattggcctccggcgccgccgccatttcg
cgccctggctcagggcccttccgcggcgcagcgcggtgcggtgtgcggctccgcccctct
gcccggtgtctcggcgagcaggcgggcctcgagcctaggaccatggagtgcagggacaaa
gcggctcttcctgcgcggaaactcgtccaagctcggttgcctttcaaacgcttgaatcct
gtaccaaaggaaaaatgtgatgcggattcagaaatcaaaaaaataaagagttcacaaagt
ggttttggtccaagtaaggattcctcccttgatgcatcgcacgtgtccctggatgatgtg
gagaatgactgccagttggattcagaggtgaattttactccaaaacttgttaacagaaag
ggtccattagactattttatacagaaaaacacaaaaggtaacacaaatgaacctgtcatt
gttattgacctgacaaaggactctggccacagacttggtgatgctgtagatgatactgat
tttgattcaaaagcatcttcatccatagctatagctaacggcacgttaggaaaagagaca
aaccagttgagttgcctgaattccactcagagcagccaaatggatgattcgatggagact
gatgtgccgtgtgaagctgtagaggataaaggtgaaggtttggtagatggaatccagtcg
tattctgggttaacagagtgtaacaacatggaaaacagaaagctgaaccagagtgaactg
aaggatgtcatctttgaggggaagatgccagtggtgctcctggaggatattatgactaca
aaatcttcccaactcgcttctctggatggaagctttatgtcggaaaatgagaccatggaa
tcctctcatgaaggagactctgggcttaccaactccccgctaagctctcgctccgtgagc
tctcctgagtcacagcctgctgcagaaacaaagaggaacactagcccttcagctgcatca
acgcctgttaggaaggtatctcagaaatgccacaaaagttcagcggagaaggagaagctg
agattgcaaagagatcaggagcgggcaggcaaactgcagaagctgcaagcagaaagggag
gaaaagggacggctgaaagaagaagcaaaagctgccaaagagcgtgccaaggaggaggca
aagaagaagaaagaagaagagaaagagttgaaagagaaggaaaggagagaaaagaaagaa
aaagaagaaaaggaaaaagctgagaagctgagagtgaaggaggagaaacgcaaggagaag
caggaagctctagaggcaaaacttgaggagaagaggaagaaagaagaggagaagcggttg
agagaggaggaaaagcgtattaatgcacagaaagcagaaattacgaggttcttccagaaa
ccaaagactccacaagccccaaagattcttgctggctcttgtgggaagtttgctcctttt
gaaattaaggagaacatggtcttagctcccctctgtcgaattgccctggatccagacttg
gaacagctggataagctcctgcgcacacagaatagcaatatttcttacttgagggatctt
aagtgtcgtaaaccacgtaaaactggacctacttttgtcagtagcagtgccggcacagta
aacagtgacgtggtggtggtagtggataactgcaaaactgacgctgttccagaaaggggg
aagtttggtagaatgaaacttctgcagttttgtgagaatcaccgtcctgcgtattggggc
acatggaacaagaaaactactgtgatccgtcccaggaatccttggtcaaaggacagtaaa
ctactggactatgaagtagacagtgacgaagaatgggaagaagaggaacctggagaaagt
ctctcccatagtgaaggggatgatgaagaggagggagaggatgaagatgatgatgatggt
ttttttgtaccccatgggtacctatctgaagatgaaggagtgacggaagagtgcgatccg
gagaatcagaaggttcgtcaaaagctgaaggcaaaggaatgggatgagctgatggccaag
gggaagaggttgcatgttctacagtctgtgaaaattggctgcatctgggaaagcacagga
aatgacagcagtacgagttcggacctaaaggttctccagcagttcacagcatgcatcttg
gattcgcctgttgcagaggaagaacagcagattgagaaatgtagtaaaaaaagagcaaaa
gatcagcaaatccttggccagcttctgccgctgctgcacggcaatgtgaacgggagcaag
gtcatcatccaggaattccaggagtgctgccggcaaggactgtttggtgatgtgactgca
gctgccaactgtagcgacacaagccccgtgagcccccacacctcccggccgcagacgcct
gttggcgaggacagtggtgtcccttccaaagccaggctaaagcgaatcatttctgagaac
tctgtgtacgagaagagacctgaatatcggatgtgctggtatgtccactcggaggtgctg
aagagttttgatcaggagcatctccctgtcccttgtcagtggaattacgtcacgcaagtg
ccttcctcggggaaggaggagggtggcagtgtgccaggcatgacagtcctgcagaccacc
cccatgccggtcaagaggaagcccaccggaagcatgtccatcaccaaattcatgaagagg
cctcgggatgctgaacaggctgaagctgcggagctggatggatttcaggcagacaccgag
gaagatgaagatgatgactgcatgattgtggacatacagccatgcaaagattctacattg
acagttcctgagacagcttcagaacgcggcggcacaggagccacacaccaggacaccagc
acggtcagcccgtctaacacagtttga
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