Cuculus canorus (common cuckoo): 104061069
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Entry
104061069 CDS
T08597
Symbol
PAX5
Name
(RefSeq) paired box protein Pax-5 isoform X3
KO
K09383
paired box protein 5
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104061069 (PAX5)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
104061069 (PAX5)
SSDB
Ortholog
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GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_32
HTH_23
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
Homeodomain
Motif
Other DBs
NCBI-GeneID:
104061069
NCBI-ProteinID:
XP_009561244
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Position
Z
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AA seq
391 aa
AA seq
DB search
MELEKSYGTPRAGRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA
ERVCDNDTVPSVSSINRIIRTKVQQPPNQQVPASSHSIASTGSVTQVSSVSTDSAGSSYS
ISGILGIASPGTESNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRV
FERQHYSDIFTTTEPIKPEQATEYSAMASLTGGLDDMKANITSPTSADLGASVPGPQSYP
VVTGRELASTTLPGYPPHVPPAGQGSYSAPALTGMVPGSEFSGSPYSHPQYSTYNDSWRF
PNPGLLGSPYYYSAAARGAAPPAAAAAYDRH
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagaaatcctatgggacgccgcgggctggccgcacaggacatggaggcgtg
aatcagctggggggagtttttgtgaacggccgccccctcccagatgttgttcgccaaagg
atcgtggagcttgcccaccaaggggtccggccgtgtgacatctcccggcagctccgcgtc
agccacggctgcgtcagcaaaatacttggcaggtattatgaaactgggagcattaagcct
ggagtgatcggaggatcaaaaccaaaggtcgccacacccaaagtcgttgagaaaattgca
gagtacaagcgccaaaatcccaccatgtttgcctgggagatcagggatagactcctcgcc
gagcgagtgtgtgacaacgacaccgtgcccagtgtcagttccattaacaggattatacgg
acaaaggtgcagcagccgcccaaccagcaggtcccagcctccagccacagcatagcctcc
acaggatccgtgacccaggtgtcctctgtcagcaccgactctgctggatcatcctactcc
atcagcggcatcctgggaatcgcctcccctggcacggaaagcaacaagcgcaagcgggat
gaagggattcaggaatctccggtaccaaatggccattctcttccgggcagagattttctt
cggaaacagatgcgaggagaccttttcacccagcagcagctagaagtgttggatcgagtc
ttcgagaggcagcactattctgacattttcacaaccacggagccaatcaaaccagagcag
gcaactgaatactcagccatggcatcattaactggtggattagatgacatgaaggccaat
ataaccagccccacttctgcagatctgggagcaagcgttcccgggcctcagtcataccct
gtggtcacaggtcgtgagctggcaagcacaaccctcccaggataccctcctcacgtcccg
ccagccggacagggcagctactccgctccagcgctgacaggaatggtgcctgggagtgag
ttttctggaagcccatatagccacccacaatactcaacgtacaatgactcctggaggttt
cccaaccctggactcttgggctccccgtactactacagcgctgcagcccgcggggcagcc
ccaccagcagctgctgctgcctacgaccgccactga
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