Cuculus canorus (common cuckoo): 104061181
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Entry
104061181 CDS
T08597
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104061181 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104061181 (CDH4)
Cell adhesion molecules [BR:
cuca04515
]
Cadherins
Major cadherins
104061181 (CDH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
104061181
NCBI-ProteinID:
XP_053937586
LinkDB
All DBs
Position
16:complement(11400870..11848441)
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AA seq
917 aa
AA seq
DB search
MRTGSQVLLVLLLPVWGSAAAAARDGDLTVRPTCKPGFSEEDYTAFVSQNIMEGQKLLKV
KFNNCAGNKGVRYETNSLDFRVRADGTMYAAHQVQMPSKQLILMVTAWDPQTLGRWEAIV
RFLVAEKSQHNGHKPKGRKTVPGELAQQQSDTLLPWRQHQSVNGLRRQKRDWVIPPINVP
ENSRGPFPQQLVRIRSDKDKEIHIRYSITGVGADQPPMEVFSIDPVSGRMYVTRPMDREE
RASYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTV
TANDADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYIVIV
QATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANLTVMDRD
QPHSPNWNAIYRIISGDPSGHFTIRTDPVTNEGMVTVVKAVDYEMNRAFMLTVMVSNQAP
LASGIQMSFQSTAGVTISVTDVNEAPYFPTNHKLIRLEEGVPMGTVLTTFSAVDPDRFMQ
QAVRYSKLSDPANWLNINATNGQITTAAVLDRESDYIKNNVYEATFLAADNGIPPASGTG
TLQIYLIDINDNAPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPSVPSAVR
KNWTITRLNGDYAQLSLRIMYLEAGVYDVPIIVTDSGNPPLYNTSIIKVKVCPCDENGDC
TTIGAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDN
ILKYDEEGGGEEDQDYDLSQLQQPETMDHVLNKTPGVRRVDERPIGAEPQYPIRPVIPHP
GDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDW
GPRFKKLADMYGGGEED
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccggctcgcaggtgctgctggtgctgcttctgcccgtttggggatcggcggcg
gcggcggcacgcgatggggatcttacagttagacccacatgcaagcctggcttttcagaa
gaagactacacagcattcgtctcccaaaacatcatggaagggcagaagttactgaaagta
aaatttaataactgtgccggtaacaagggagttcggtatgaaaccaacagcctggacttc
agagtgagagcggatgggaccatgtatgctgcccatcaggtgcaaatgccctcaaagcag
ctgatcctgatggtgacggcgtgggatccccagaccctgggcaggtgggaggcgattgtc
aggtttctggtggcagagaagtcgcaacacaatgggcacaagccaaaaggcaggaagacc
gtgccgggagaactggcgcagcagcagagcgacactcttctcccatggcgccagcatcag
agcgttaacggcctgcgacggcaaaagcgagactgggtcatcccacccatcaacgtgcca
gaaaactccagaggaccctttccgcagcagctggttcgaattcgttctgataaggacaaa
gagatccatatcagatacagcatcactggagtgggagccgaccagccgccgatggaagtc
ttcagcattgaccctgtgtctggcaggatgtatgtgactcgcccaatggacagagaagaa
agagcttcctaccacctccgggctcatgcagtggatatgaatggaaacaaggtggagaat
cctattgacctttacatctatgtgattgatatgaatgacaacagaccggagtttataaac
caagtctataatggctctgttgatgaaggctctaaaccaggtacctacgtgatgacagtg
acagcaaatgacgcagatgatagtactacagcgaatgggatggtgagataccgaatcgtg
actcagaccccacagagcccatcgcaaaatatgtttactattaacagcgagacgggagac
attgtcactgtggctgctgggcttgacagagagaaagttcagcagtatatagtcattgtt
caagccacagatatggaaggaaatcttaactatggtctctccaacacggcaacagcgatc
attacggtgacagatgtgaatgacaacccacccgaattcactaccagcacttattcagga
gaagttcctgagaacagagtggaggttgtggtggcaaatctgacggtgatggaccgggac
cagcctcactctcccaactggaatgccatctaccgaattatcagcggagacccctctggc
catttcaccatccggacagaccctgtcaccaatgaaggcatggtaacggttgtgaaggca
gtcgattatgagatgaacagagctttcatgctgacagtgatggtatcaaaccaagctccc
ctggccagtggcatccagatgtccttccagtcgacagcaggagtcaccatttcagtcaca
gatgtcaacgaagcaccgtatttccccacgaaccacaagttaatcaggctggaggaaggg
gtgcccatggggacagtcctgacgacgttttcagcagtggatcctgatcgcttcatgcag
caggcagtaagatactctaagctgtcagatcctgcaaactggctgaacattaatgccaca
aatggtcagatcactactgctgctgtccttgatcgggagtcagactacattaagaataat
gtctacgaggccacattcttggcggctgacaacggcataccccccgcaagcggcactggc
actctgcagatctacctaatcgacatcaacgataatgctcctgagcttctgccaaaggag
gcacagatctgtgaaaagccaaacctgaatgtcatcaacataacagccgcggatgctgac
atcgatccaaacgttgggccctttgtcttcgagctgccaagtgtgccatctgcagtgagg
aagaactggaccataacacggctgaatggtgattacgcccagcttagtttacgaatcatg
tacctggaagcgggtgtgtatgatgtgccaatcattgtgacggactcaggaaatcccccc
ttgtacaacacatccatcatcaaagtgaaggtgtgcccgtgcgatgagaacggcgactgc
accaccatcggggcggtggctgcagcggggctgggcaccggcgccatcatcgcaatcttg
atctgcatcatcattttactgaccatggttctgctgttcgtggtgtggatgaaacgccgg
gagaaggagcgtcataccaagcagctcctgatcgaccccgaggacgacgtcagggataat
attctgaagtatgacgaagagggaggtggagaggaagaccaggattacgatttaagccag
ctccagcagccagagaccatggatcacgtgctgaacaaaacacctggagtcagaagggtg
gatgaaagacctattggtgctgaaccgcagtatcctataagaccagtaatcccacatcca
ggggatattggcgactttattaatgagggcctgcgtgcggcggacaatgaccccacggcc
cccccgtatgattccctgttggtctttgactacgagggcagcggctccaccgccggttcc
gtcagctccctcaactcctccagctccggggaccaggactacgactaccttaacgactgg
gggcccaggttcaagaaactggcggacatgtatgggggaggcgaggaagattaa
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