Cuculus canorus (common cuckoo): 104061326
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Entry
104061326 CDS
T08597
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104061326 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104061326 (SS18)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104061326 (SS18)
GBAF(ncBAF) complex
104061326 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
104061326
NCBI-ProteinID:
XP_053915161
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All DBs
Position
2:48740644..48782848
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AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMSSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQAGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPQQQGYPPQQQQYPGQQGYPG
QQQGYGPSQSGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgttcgcggccccgaggcagcgggggaagggcgagatcacaccggccgcc
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaac
aaaggaaagacgtctgaatgctctcaataccagcagatgctgcatacaaacttggtttac
ctagccactatagctgactctaatcagaacatgcagtctctactaccagcaccacccaca
cagaatatgcctatgggtccgggagggatgagtcagagcggccctcccccacctccgcgc
tcgcacaacatgtcttcagatggtatggtaggtgggggccctcctgcaccacacatgcag
aaccagatgaacggccagatgcctggacctaaccatatgcctatgcaaggacctggacct
aaccaactcaatatgacaaacagttccatgaacatgccttcaagtagccatggatcaatg
ggtggctataatcactcggtgccatcctcgcagagtatgccagtgcagaatcagatgact
atgagccagggacagccgatgggcaactatggtcccagaccaaacatgaacatgcaacca
aaccaaggtccaatgatgcaccagcagcctccctcccagcaatacaacatgccacaagca
ggtggccagcattaccaggggcagcagccacctatgggaatgatgggccaggttaaccaa
ggaaatcacatgatggggcagagacagattcctccatacaggccgccacagcaaggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaactcgcaatatggtcagcagcaagatgcctatcaaggaccaccc
caacagcagggttatccaccacaacagcagcaatatccaggccaacaaggctatccagga
caacagcagggttatggtccctcccagagtggtccaggacctcagtatcctaattatcca
caaggacaaggccagcagtatgggggataccgacccacacagcctgggccaccacagcca
ccacagcagaggccttatggatatgaccagggtcagtatggaaactaccaacagtga
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