Cuculus canorus (common cuckoo): 104061380
Help
Entry
104061380 CDS
T08597
Symbol
TNPO3
Name
(RefSeq) LOW QUALITY PROTEIN: transportin-3
KO
K15436
transportin-3
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
cuca03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104061380 (TNPO3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104061380 (TNPO3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104061380 (TNPO3)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
104061380 (TNPO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
104061380
NCBI-ProteinID:
XP_053929619
LinkDB
All DBs
Position
1:209128205..209162385
Genome browser
AA seq
924 aa
AA seq
DB search
MEGGGKPSLQVVYQAVQALYHDPDPSGKERASCWLGELQRSVHAWEISDQLLQIRQDVES
CYFAAQTMKMKIQTSFYELPTDSHASLRDSLLSHIQNLKDLSPVIVTQLALAIADLALQM
ASWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSST
VVSLLMTCVEKAGNDEKMLIKIFRCLGSWFNLGVLDSTFMANSKLLSLLFEVLQQDKTSS
NLHEAASDCVCSALYAIENVETNLPLALQLFQGVLTLESAYHMAVAREDLDKVLNYCRVF
TELCETFLDKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTDDA
VIHSIFKAYIQRLLHALARHCQLDSDHEGVPEETDDFGEFRMRVSDLVKDLIFLVGSVEC
FAQLYATLKDGNPPWEVTEAVLFIMASIAKSVDQENNPTLVEVLEGVVRLPETVHTAVRY
TSIELVGEMSEVVDRNPQFLDPVLGYLMKGLCDRRLASAAAKAIHNICSVCRDHMAQHFN
GLLEIARSLDSFTLSPEAAVGLLKGTALVLARLPLEKIAECLSELCAVQVMALRKLLSQE
PSNGLSSDPTVPLDRLAVIFRHTNPIVENGQIHPCQKVIQEIWPVLSETLNKHSADNRIV
ERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYRAHQHSCFLYLGSILVDEYGMEEGCRQ
GLLDMLQALCIPTFQLLEQPNGLQNHPDTVDDLFRLAARFIQRSPVTLLRSQVMIPILQW
AIAATTLDHRDANCSVMKFLRDLIHTGVANDHEEDFEVRKELINQVMNQLGQQLVNQLLH
TCCFCLPPYTLPDVAEVLWEIMQIDRPTFCRWLENSLKGLPKETTGGAIQVTHKQLTDFH
KQVTSAEECKQVCWALRDFTRLFR
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggcgggaagcccagcctgcaggtggtttaccaggccgtgcaggcgctctac
cacgacccggaccccagcgggaaggagcgcgcgagctgctggctgggcgagctgcagcga
tcggtccatgcctgggagatctctgaccaactgctgcagatccgtcaggatgtggagtca
tgctactttgcggcacagaccatgaagatgaagatacagacttccttctatgagctcccc
acggactcccacgcttccttacgggactccctgctgtcccacatccagaacttgaaggac
ctatcaccggtcatcgtcacccagctcgctttagcaatagctgacctggccctccagatg
gcttcttggaagggctgcgtgcaaacacttgtggaaaagtacagcaatgatgtcacgtcc
ctgccgtttttgctggagatcctcacggtgctgccagaagaagtccacagccgatccttg
cgcatcggagccaaccgccggactgaaatcatcgaggatctggcatactattccagcaca
gttgtctctctgctgatgacgtgtgtggaaaaagcaggcaatgacgagaagatgctcatc
aaaatcttccggtgcttggggagctggttcaacctgggtgtcctggacagcaccttcatg
gcaaacagcaagctgctgtcgctcctctttgaggtgctgcaacaagacaagacatcatcc
aacctccacgaagcagcctcggactgcgtgtgctcagccctctacgccattgagaatgtg
gagacaaatcttcccctggccctgcagctcttccagggcgtcctcacgcttgagagtgcc
tatcacatggctgtagcacgagaggacctggacaaggtgctcaattattgccgtgttttc
accgagctgtgtgagaccttcctagataaaattgtttgcacgcccggccaggggctgggt
gacttgcggacgctggagctgctgctgatctgtgccggtcacccacagtatgaggtggta
gaaatttcatttaacttctggtaccgactgggggagcacctgtacaagacagatgatgcc
gtcatccacagcatcttcaaagcctacatccaacgccttctccatgctctggccagacac
tgccagctggactcggaccatgagggtgtcccagaggagacggatgactttggggagttc
aggatgcgggtctcggacctggtgaaagacctgatcttcctggtgggatcagtggagtgt
tttgctcagctttatgcgactctgaaggacgggaatccaccctgggaggtgacggaagct
gtcctcttcatcatggcctccatagcaaagagtgttgaccaggagaacaacccgacgctg
gtggaggtgctggagggagtggttcgcctccctgagacagtgcacactgctgtccgctac
accagcatcgagctggtgggagagatgagcgaggtggtggacagaaacccccagttcctg
gatcccgtgctgggttacttgatgaaaggtctgtgtgacaggcggctggcatcggccgcg
gccaaggccatccacaacatctgctctgtgtgccgggaccacatggctcagcactttaac
gggctgctggagatagcccgctctctcgactccttcacactttccccagaggcagctgtg
ggactcctgaaaggaacagccttggtccttgccaggctccccttggagaagatagcagaa
tgcctcagtgagctctgtgctgtacaagtgatggcgctgaggaagctgctttctcaggag
ccaagcaacggcctctcctctgaccctactgtgcccctggatcgacttgctgtcatattc
cgccacaccaaccccatcgtagaaaacggacagatccatccgtgccaaaaagtcattcag
gaaatctggcccgtgctgtcagagaccctgaacaaacacagtgccgataaccgcatcgtg
gagcggtgctgccggtgcctgcgctttgctgtgcgctgcgtgggcaaaggctctgctgcc
ctgctgcagccgcttgtcactcagatggtgaacgtgtaccgggcgcaccagcactcctgc
ttcctctacctgggcagcatcctggtggatgagtacggcatggaggagggctgccggcag
ggtctgcttgacatgctgcaggcgctctgcatccccacctttcagctgctggagcagccc
aacggccttcaaaaccacccggacaccgtggacgacctcttccgactcgcagccaggttt
atccagcgcagccctgtcaccctgctgcggagccaggtgatgatccccatcctgcagtgg
gctattgctgccaccaccctggatcaccgggatgccaactgcagtgtcatgaagttcctg
cgtgatctcatccacaccggcgtggccaacgatcatgaggaggattttgaagtgcggaag
gagctcatcaaccaggtgatgaaccagctgggccagcagcttgtcaaccaactgctgcac
acgtgctgcttctgcctgccaccctacaccctgcctgatgtcgccgaggtgctctgggag
ataatgcagatcgaccggccgacattttgccgctggctggagaactcactgaagggttta
ccaaaggaaacgacgggaggagccattcaagtcacacacaaacagctgaccgacttccac
aagcaggtcacgagtgctgaggaatgtaaacaagtctgctgggctctgagggacttcacc
cgcttgttccgatag
DBGET
integrated database retrieval system
