KEGG   Cuculus canorus (common cuckoo): 104061408
Entry
104061408         CDS       T08597                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
cuca  Cuculus canorus (common cuckoo)
Pathway
cuca04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    104061408 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cuca04131]
    104061408 (WDR7)
Membrane trafficking [BR:cuca04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    104061408 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd WDR55 CFAP251_N ASA1 Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_SCAP PAC11 Beta-prop_WDR19_1st KNTC1_N WDR72_alpha-sol WDR90_beta-prop_4th Beta-prop_pof12 PD40 DNAI3_WD Tricorn_2nd Beta-prop_DCAF4 KduI Arminin
Other DBs
NCBI-GeneID: 104061408
NCBI-ProteinID: XP_053909914
LinkDB
Position
Z:77678045..77692077
AA seq 1485 aa
MAGNSLVLPIVLWGRRAPTHCISTLLLMEDASMIVTGCHDGQICLWDLSSDLEISPRALL
FGHTASITCLAKASAAGDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQLS
VGSQREGRLLCHGHYPEILVMDATSLEVLYSLLSKISPDWISSMTIIRSSRTQEDTVVAV
SVTGILKVWIISSEAARMQETTSVFEEESKPIYCQNCQSISFCAFTQRSVLVVCSKYWRV
FDAGDYSLLCSVPGEADQTWTGGDFVAADKVIVWTEDGRSFIYKLPASCLPASDSFRSDV
GKPVENLIPPLLHSVLDRVDKQLLICPPVTRFFYSPQDLAYKLLIQGDSSGRLRIWNVPD
TLEQEGTKGLQSTTSVSLQEAFEKLSPGPAGIIDQLSVVPTSPEPLKVTASVYIPAHGRL
VCGREDGSIVIVPATQTAIVQLLQGEHTLRRGWPPHRTLRGHRNKVTCLLYPHQVSSRYD
QRFLISGGVDFSVIVWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCVCSVASDHS
VGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGI
TAVEILSACDEAVPAAVDNLSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLASEAA
DKGNLPKYSHNSLMVQALKTNVTDPDIHVLFFDVEALIIQLLTEEASRPNAAMVSPENLP
KASGGSEKGGSFLAGNRAAVLFQQVKETIKENIKEHLLDDEDEDEETLRQRREDGDPEYR
SSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNSVLDELCLHRLGMLKPHCSVSFGLLSRG
GHMSLMLPGFNQPVGRAPSGPLEVGRKMSITEGLGKGTYGVSRAVTTQHLLSVISLANTL
MSMTNATFIGDHMKKGPTRPPRPGTPEMTKAKAPPSVSSHAAQGQIKQVAPAGPPGVDTA
TPGPAAPPFHSCFLVNEGWSQLAAMHCVMLPDLLGLEKFRPPLLEMLARRWQDRCLEVRE
AAQALLLAELRRIEQVGRKETIDAWAPYLPQYMDNVISPGVTTEALQTGTANPDTSGTEA
KVQEEEHDLVDDDVTAGCLPGLPPMKKVSTSYEERRKQATAIVLLGVIGAEFGAEIEPPK
LLTRPRSSSQIPEGFGLTSAGSNYSLARHTCKALTFLLLQPPSAKLPAHSTIRRTAIDLI
GRGFTVWEPYMDVSAVLMGLLELCADAEKHLANITLGLPLSPAADSARSARHALSLIATA
RPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKAEILRVIEILIEKMPTDVVDLL
VEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIRTG
KCQTIHGHKGPITAVAFAPDGRYLATYSNSDSHLSFWQMNTSLLGSIGMLNSAPQLRCIK
TYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4458 nt   +upstreamnt  +downstreamnt
atggcaggcaacagcctggtgctgcccatcgtcctgtggggccgccgggcccccacccac
tgcatctccaccctcctcctgatggaggacgcttccatgatcgtcaccggctgccacgac
gggcagatatgtctctgggacctctcctcggacctggagatcagccccagagctctgctc
tttggtcacacagcctccatcacgtgtctggccaaggcctccgctgcgggcgacaagcag
tacatcgtcagcgcctcagagagcggggagatgtgtctgtgggacgtcaacgatgggaga
tgcatcgagttcaccaagctggcctgcacccacaccggcatccagttctaccagttatcc
gtggggtcccagcgggaggggagattgctctgccacggccactacccagaaatactcgtc
atggacgcaaccagccttgaagttctctactccttgttgtccaagatctctccagactgg
atcagctccatgaccatcatccgctccagcagaacccaagaagacacggtggtggcggtt
tcagtgaccggcatcctcaaggtgtggatcatctcctccgaagccgctcggatgcaggag
acaacgtcggtgtttgaagaggagtccaaacccatctactgtcagaactgccaaagcatc
tcgttctgcgccttcacccagcgctccgtcctggtggtctgctccaagtactggagggtc
ttcgacgctggtgattattccctcttgtgctccgtgcccggcgaggccgaccagacctgg
accggtggggactttgtggcagctgacaaagtcatcgtttggacagaagatggccgaagc
ttcatctataagttaccagccagttgtctcccagccagcgactccttccgcagcgacgtg
gggaaaccggtggagaacctcatcccaccgctgctccacagcgtcttggaccgagtagac
aaacagctgctgatctgcccgccggtgactcggttcttctacagtccccaggacttggcc
tacaagctcttgatccaaggcgattcttctggaaggctcaggatttggaacgttccggat
acgctggagcaggaggggacgaaaggcctccaaagcaccacgtcggtgtccctccaggaa
gcctttgagaagctgagccccggtcccgctggcatcatcgaccagctgagcgtggtgccc
accagcccggagcccctcaaggtgacggccagcgtctacatcccggcccacgggcgcctg
gtctgcgggcgcgaggacggcagcatcgtcatcgtcccggccacgcagacggccatcgtg
cagctgctgcagggcgagcacacgctccgcagaggttggccaccccaccggactctgcga
ggtcaccgcaacaaagtcacctgtttgctgtaccctcatcaggtttcttctcgttacgat
caaaggtttttgatctcggggggggtggatttctccgtcatcgtctgggacatcttctcc
ggtgagatgaaacacatcttctgcgtccacggaggagaaatcacccaactcctcgtccca
ccagagaactgcagcgcgcgggtgcagcactgcgtctgctcggtggccagtgaccactcg
gtggggctgctcagtctccgagagaagaaatgcatcatgttggcatctcggcaccttttc
cccatccaagtcatcaagtggagaccttctgatgactacctggtggtgggatgctccgat
ggctccgtctatgtctggcagatggacacgggtgctctggaccgttgcgtgatgggcatc
acggcggtggagatcctcagcgcctgcgacgaggccgtgccggccgctgtggacaacctg
agccacccggcggtcaacctgaagcaggccatgacccgccgcagcctggccgcgctgaag
aatgtggcccaccagaagctccagactctcgccaccaacctcttggcttctgaagcggcc
gacaaggggaacctgcccaaatactcccataattccctcatggttcaagctctaaagacc
aacgtgacggaccccgacatccacgtgctcttcttcgacgtggaggccctcatcatccag
ctcctgaccgaggaggcctccaggcccaacgccgccatggtctctcctgagaacctgccg
aaagcttctggtggctccgagaaaggagggtccttcttggccgggaaccgggcggccgtc
ctcttccagcaggtgaaggaaaccatcaaagagaacatcaaagaacatctcttagatgat
gaagatgaagatgaggagaccttacggcaaagaagagaagatggtgaccccgagtatcgg
tcgagcaagtccaaacccttgaccttgttggagtacaacctcaccatggacacggccaag
ctcttcatgtcctgtcttcacgcctggggcctcaactcggtcctggatgagctttgtctc
caccgtctggggatgctgaagccccactgctccgtgtccttcggtctcctctccagagga
ggccacatgtccctcatgctcccgggcttcaaccagccggtgggccgagctccgtcgggg
ccgctggaggtgggcaggaagatgtccatcaccgaagggttggggaagggcacctacgga
gtgtcccgggccgtcaccactcagcatctcctgtccgtcatctccttggccaacacgctg
atgagcatgaccaacgccaccttcatcggggaccacatgaagaaagggcccaccaggcca
ccgagaccggggactcccgagatgaccaaagcgaaggccccaccttccgtttcgagtcac
gcggcccaagggcagatcaagcaagtggctcccgctggtcctcctggcgtggacacggcc
acccccggccctgctgctcctcctttccattcctgcttcttagtcaacgaagggtggagc
cagctggcggccatgcactgcgtcatgctcccggatctcctgggcctggagaagttccgc
cctcctctcctggagatgctggcgcgccgctggcaggatcgctgcttggaggtgcgagaa
gccgcccaggccctgttgctggccgagctgagaagaatcgagcaggtgggacggaaggaa
accatcgacgcgtgggctccttacctcccccagtacatggacaacgtcatctcccccgga
gtcaccacggaagctcttcaaaccggaacggccaacccggacacctcggggacagaggcc
aaagttcaagaagaagaacacgatctggtggacgatgacgtcacagcaggttgtctccct
ggcctgccgcccatgaagaaggtctccacgtcctacgaggagaggcgcaagcaggccacg
gccatcgtcctcctgggcgtcatcggggccgagtttggagccgaaatcgaacctcccaaa
cttctgacccgccctcggagctccagtcaaattccggagggcttcggcctgaccagcgct
ggctccaactactccttggcccggcacacctgcaaagcgctgacgttcctgctgctgcag
ccgcccagcgccaaactgccggcgcacagcaccatccgcaggacggccatcgatctcatc
ggccgcggcttcaccgtctgggagccctacatggacgtctcggccgtgctcatgggcctc
ctggagctctgcgccgacgccgagaagcacttggccaacatcacgctgggtttgccactc
agcccggcggccgactcggcccgctcggctcgccacgccctgtccctcatcgccaccgcc
cgcccgcccgccttcatcaccaccatcgccaaggaggtgcaccggcacacggcgctggcg
gccaacacgcagtcgcagcagaacatccacaccaccaccctggcccgcgccaaggccgag
atcctgcgcgtcatcgagatcctcatcgagaagatgcccaccgacgtggtggaccttctc
gtggaggtgatggacatcatcatgtactgcttggaagggtctttggtcaagaagaagggc
cttcaggaatgctttccggccatctgcaggttctacatggtcagctactacgagcggagc
caccggatcgcggtgggagctcgtcacggctccgtcgccctctacgacatccgcacgggc
aagtgtcagaccatccatggtcataaaggtcccatcactgcggtggcttttgctcctgat
ggccgctaccttgctacctactccaactccgacagccacctctccttctggcagatgaac
acgtctctcctggggagcatcggcatgttgaactcggcgcctcagctccgctgcatcaag
acctaccaggtcccaccagtccaaccagcttctcccggttcccacaatgccctgcgcttg
gcccgcctcatctggacctccaaccgcaacgtcatcctcatggcccacgatggcaaggag
catcgcttcatggtctag

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