KEGG   Cuculus canorus (common cuckoo): 104061413
Entry
104061413         CDS       T08597                                 
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
cuca  Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cuca03019]
    104061413
   04121 Ubiquitin system [BR:cuca04121]
    104061413
Enzymes [BR:cuca01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104061413
Messenger RNA biogenesis [BR:cuca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104061413
Ubiquitin system [BR:cuca04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104061413
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_KhpA-B KH_2 zf-C3HC4 Prok-RING_4 KH_DEAH11_2nd RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 104061413
NCBI-ProteinID: XP_053909187
LinkDB
Position
W:complement(11699978..11716813)
AA seq 591 aa
MPSSSAAISSTEPLHLPPPQSLLFQERLTGLGFRHSGEVAWQRQAGLAPPPDPPGELGPG
EVAAAGDEGDLELEEELLLAGADDEEEGDSAALLFPASSSPSQPLPLLPALGSVLFSSSF
DAQGAVEPLCETDEPHGVMAAMLSHAYGNGGAAGLSGEPAALLRRKSINTTECVPVPSSE
HVAEIVGRQGCKIKALRTKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREILSAAEHFSM
IRASRNKNNPALEGLLCAPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVT
PSRDKEPVFEVTGMPENVDRAREEIEMHIAMRTGNYIELNEENDFHYNGMDVSFEGGTFG
SAWLASNPVSLSCIRMASNYRNDSSSSLGSGSTDCYFGSNRLADFSPGNSWFGETLPSVG
TEDLMVDSATYDSFPMPSQNIWTPFEPVNSPSSFDSDPASNVKPWCRGSQPSTPCLSPTF
LESLDHPLAGRVRSDPPSTGHQAGLPIYIPTFSNGTNSYSSSNGGSTSSSPPELRRKQDC
MICFESEVIAALVPCGHNLFCMVCANKICEKEMPLCPVCQTTVTQAIQIHS
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgccaagcagcagcgctgccatctcctcaaccgagccgctgcacctccctcccccccag
tcactgctgttccaggagcgccttactggcctcggtttccgccacagcggagaggtggct
tggcagcggcaggcgggcttagcgccgccgcccgacccccctggggagctgggacctggc
gaggtggcggcggcgggggacgagggagacttggagctggaggaggagttgctgctggcg
ggggcggacgacgaggaggagggggactcggccgcgctactgttccccgcgtcctcctcg
ccctcccagccgctcccgctgctgccagcgctgggctccgtcctgttctcgtcctctttc
gatgcccagggggcggtggagcccctctgcgagaccgacgagcctcacggcgtgatggcg
gcgatgctatctcacgcctatggcaacgggggggcggcgggcctcagcggcgagccggcg
gccctactccgccgaaagagcatcaacaccaccgagtgcgtgcccgtgcccagctccgag
cacgtggccgagatcgtggggcgtcagggttgcaaaataaaagctctaaggaccaagaca
aatacttatattaagacccctgttcgtggagaagaacccatctttgttgtcactggacga
aaagaggatgtagccatggccaaaagggaaattctctcagctgctgaacacttctccatg
atcagagcatcacgcaacaagaacaatcctgccctggaaggcttgctatgtgcccccaac
ctgccaggtcagacaacagtccaagtcagggtgccttaccgtgtagttgggctagtggtt
ggacctaaaggagctacaatcaaaagaattcagcagcagactcatacctacatagtcact
cccagcagagacaaggagcctgtctttgaagtgacaggaatgcctgaaaatgttgaccgt
gcgcgtgaggagatagagatgcatatagccatgcgtactgggaactacatagagctgaac
gaagagaatgatttccattacaatggtatggatgtgagctttgaaggaggcacttttgga
tctgcatggcttgcttctaatcctgtttctcttagctgcatcagaatggcttctaattat
agaaatgatagctccagctccttgggaagtggctccacagattgctattttggaagcaat
agattggctgacttcagcccaggcaactcctggtttggagaaacactgccttcagtgggc
acggaagacctcatggttgactctgccacatatgactcctttccaatgccttcccaaaac
atttggactccttttgaacctgtaaactctccctccagctttgatagtgacccagctagt
aatgtcaagccttggtgccgagggagccaaccatctactccttgtctgtcacccacattt
ctggaaagtctggatcacccactggctggtagagtgaggagtgacccacctagcactggc
caccaagctggccttcccatatacatccctaccttctccaatggtaccaacagctattcc
tcttctaacggtggctccacctctagctcaccccctgagttgagacggaagcaagactgc
atgatctgcttcgagagcgaagtcattgcagctctcgtcccctgtggccacaatctcttc
tgcatggtgtgtgccaacaaaatctgtgaaaaggaaatgccattatgtcctgtttgtcag
acaacagttactcaggcaatccaaattcactcttaa

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