Cuculus canorus (common cuckoo): 104061415
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Entry
104061415 CDS
T08597
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104061415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104061415
Enzymes [BR:
cuca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104061415
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
104061415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
UBM
Cdd1
HHH_5
RecR_HhH
DNA_pol_lambd_f
Snu56_snRNP
Motif
Other DBs
NCBI-GeneID:
104061415
NCBI-ProteinID:
XP_053909289
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All DBs
Position
W:22198509..22207535
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AA seq
597 aa
AA seq
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MAYSGQCGDHREGGTERPGSQFWDLASELRSSMEPEEEEEEERWDGEGPGGHNTSVSMSR
VIVHMDLDCFYAQVEMIRKPELKDKPLGVQQKSIVVTCNYVARNLGVKKLMAVKAAKEIC
PHLVLVNGEDLTPYRETSYKVTELLEEFCPLVERLGFDENFVDVTEMVEKRLKQQKTSSD
LVVAGHVYNNHAIDLHDRTHVALVLGSQIAEDIRRAVATTLGLTSCAGVASNKLLAKLVS
GTFKPNQQTVLLPQSRQDLLRALRGVQKIPGIGYKTAKRLETLGIESVWQLQTFPATALE
KELGLSLARRIQKLSYGDDDSPVTPSGPPQSFSDEDSFKKCSTEAEVKEKLLELLPNLLE
RVYKDGRRPHTLRLTIRQSSSSERWFHRESRQCPIPPHLLQRFGQGNANLLSPLVDVLMK
LFHKMINVEVPFHLTLLSVTFSNLKELPSTKKGSIGFYLKEMPPKRDREVDDGDAVWLQS
HWRTRATKARRHLEEKDVPEAQVLNGPVPFSPHPVDHLEDTPKAMVCGQPEPTEVVVFPP
DVDPQTFSELPPDVQEDLMAQWKSQEAISKPLEKPKATNEKRSSAQVNTLLRYLKPR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcctatagcggccaatgtggcgaccatagagagggtgggacagagcggcctggaagc
cagttctgggatttggcctcggagctgaggagctcaatggagcccgaggaggaggaggag
gaagagcggtgggacggcgaagggccgggaggacacaacacatccgtttcaatgtcccga
gtgattgtccacatggacctggactgcttttacgcccaagtggagatgattcggaagcca
gaactgaaagacaaacctttaggtgtgcagcagaagtccatcgtggtcacctgtaactac
gtcgccagaaatctcggcgtgaagaaactgatggcggtgaaggccgccaaggagatatgt
cctcacctggtcctggttaacggagaagacctgacgccctacagagaaacgtcctacaag
gttacagagttgttggaggagttctgtcctctggtggaaaggctcggcttcgatgagaac
ttcgtggacgtcacagagatggtggagaagagactaaagcagcagaagacttcttctgac
ctcgtcgtggccggtcacgtctacaacaaccacgccatcgatctccacgacagaacccac
gtggcgctggttctgggctctcagatcgcagaggacatcaggcgagccgtggccaccacc
ctgggcctcaccagctgcgcgggagtggcctccaacaaactcttggccaaacttgtctcc
ggaaccttcaaacccaaccaacaaaccgttctcctgccacaaagccgacaagatcttctc
cgtgctcttcgtggtgtccaaaagattcctggcatcggctacaaaacagccaaacgcttg
gaaacgttgggaatcgagagcgtttggcagctccaaacctttccggccaccgcgttggag
aaggaattgggcctttctctcgctcggcgcatccagaagctcagctacggcgatgacgac
tctccggtgactccatcaggtcctcctcagtccttcagcgacgaagattccttcaagaag
tgctcaacggaagcagaagtcaaagagaaacttctggagctgctcccgaacctcttagaa
agggtctacaaagatggccgacgacctcacacgttgagactcaccatccgccagagctcc
tccagcgagcgatggttccaccgcgagagccgccaatgtccaatccctcctcatctcctt
caacgcttcggtcaaggtaacgccaaccttctctcgccgttggtggacgtcttgatgaag
ctcttccataagatgataaatgtggaggtcccgtttcatctcacccttctaagcgtgacc
ttctccaacctcaaagaacttcccagcaccaagaaaggatccatcggtttctacctcaag
gagatgccaccaaaacgtgaccgggaagtggacgatggagatgccgtgtggctccagagc
cactggagaaccagagccaccaaagccaggagacatctggaggagaaagatgtccccgaa
gcccaagttctaaatggtccggttcctttttctcctcatcccgttgaccaccttgaagat
actccaaaggcgatggtctgcggacaaccagaaccgacggaggtggtggtgtttcctcct
gacgtcgatcctcaaacgttctccgagctccctccagatgtccaagaagacctgatggcc
caatggaagagtcaagaagccatctccaaacctctggagaagcccaaagccaccaacgag
aagaggtcttcagcacaagtcaacaccttattgaggtatctaaaaccccgatga
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