Cuculus canorus (common cuckoo): 104061466
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Entry
104061466 CDS
T08597
Symbol
SYNJ2
Name
(RefSeq) synaptojanin-2 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00562
Inositol phosphate metabolism
cuca01100
Metabolic pathways
cuca04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
104061466 (SYNJ2)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
104061466 (SYNJ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104061466 (SYNJ2)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
104061466 (SYNJ2)
Membrane trafficking [BR:
cuca04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
104061466 (SYNJ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
Motif
Other DBs
NCBI-GeneID:
104061466
NCBI-ProteinID:
XP_053917498
LinkDB
All DBs
Position
3:complement(47860824..47931619)
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AA seq
1509 aa
AA seq
DB search
MALSKGLRLLWKQDSGPSALLEARSRQDCLLLEAGTVAALTPEEKDAIKGQYEKLVDAYG
CLGELQLKCGNTRMHFLVLVTGCTSVGKILDAEVYKITATDFCPLQEETKEEERVTALKK
ILNSGMFYFSWPNAGSDFDLTVRAQKQGDNNYESGNSFFWNQLLHVPFKHYQVNCSDWLL
KVICGVVDIRTVYASHKKAKACLISRISCERASARFHVRGVNDDGHVSNFIETEQTIYLD
DDVSSFVQIRGSVPLFWEQLALQVGSRHLRLNRGLEANAPAFDRHMMLLKEQYGKQVIVN
LLGSRGGEEVLNRAFKKLLWASSHAADTPMINFDYHQFAKGGKTEKLENLLRPQLKLHWE
DFGIFTKGKNVSPRLQTGTFRMNCLDCLDRTNSVQSFIALEILLAQLESLGLNSKSIIER
FVESYKVMWTLNGHNLSRVFTGSRALEGKHKVGKLKDGARSVSRTIQSNFFDAVKQEAIE
LLLMGDFFSEEYADKGKMLMDHTALLVTPSILKAMSERQFEFTSFKRIRVATGTWNVNGG
KQFRSNILGTSELTDWLLDSPKLSGVSEFQDDNCPPDIFAVGFEEMVELNAGNIVNASTT
NRKMWGEQLQKAISRTHRYIQLTSAQLVGVCLFIFVRPYHVPFIRDVAIDTVKTGMGGKA
GNKGAVSIRFQFYSTSFCFICSHLTAGQTQVKERNEDYKEITQKLSFPMGRSVFSHDYVF
WCGDFNYRIDLTYEEVFYFLKRQDWKTLLEFDQLQQQKSSGKIFKDFHEGTINFGPTYKY
DVGSEAYDTSDKCRTPAWTDRVLWWRKKLPFEKTAGEINLLDSDLNAETKVRHTWTPGAL
MYYGRAELQASDHRPVLAIVEVEVQEVNQAARESVFQEVSSFQGPLDATVVVNLLSPTPE
EKNEFPEDLRTELMQMFEDYGTIVLVRISGGQMLVTFADSKSALRVMDIDGVKVRGRTVK
IRPKTKDWLKGLQEEIARKRDSIAPVSPMANSCLLEENFDFSSLDYDSEGDIVEDEDDYL
DDALCQHLVEDMPEGCGHFTSTDHSDKSGQIPRLYKDDTDLGNLKQELEASGERHRRTPS
RSLSIPTRTRPLQPPQRPPPPAGTPGKKSPSDSSLPPGSSSACSILATAKLLPGAPQQPP
KVRTGISKPYNVKQIKTTTAEEAEEAIRCLMEAKGGLQEDAVKSTSTRNQMFTKPEPLPT
IAKSTSCQGSQAGPVLVPHRPPPKVPTTKKPVPLQRTTVKVENALPTEEQFDQQPVLPPF
GLSEPCLEAGTILSPTKITPVPKPRILQPEKPQESRGSSERQLPSASTAEASMLPPQNAS
FAPKVPPRRKKSAPAALHLQVLQSSDNPLFSGLMFNSNNNNNPGFCPQTQDVPIPARSTL
AAPTSSASLENSTIKQLAPNAAELIANLQGPPIAGGQHPQLSPSSSLLENTNLLDLDTDS
SCPASIQAASTTSPAHTPENLKCPSLKDFSHWVTFSDDEDSSALAEGFKLLALEQNKKTL
KNTNSDLEL
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggctctgagcaaagggctgcggctgctctggaagcaggattcgggcccgagcgccctg
ctggaggcgcgttcccggcaggactgcctgttgctggaggctggcaccgtggctgcgctc
actccagaagaaaaggatgcaattaaaggacaatatgaaaaactcgtggatgcttatggc
tgcctaggagagcttcagcttaaatgtggtaacactcggatgcactttctggtcctggtg
acaggctgtacatcggtgggaaaaatcctggacgctgaagtttacaaaattactgcaaca
gatttctgtcctctccaggaagaaaccaaggaagaggagcgtgttactgccttgaagaaa
atactgaactctgggatgttctatttctcctggcctaatgcaggctcagactttgacctg
actgtgcgggctcagaagcagggtgataacaactatgaatctggtaactcattcttctgg
aaccaactattgcatgtgcccttcaaacactaccaggtgaactgctctgactggttgctg
aaggtgatctgtggtgtagtggacattcgcactgtttatgcttcccacaagaaagcgaaa
gcctgcctcatctctcgcatcagctgtgaacgagctagtgcccggtttcacgttcgaggg
gtcaatgatgatgggcatgtgtctaacttcattgagacagagcagacaatttacttggat
gatgatgtgtcttcctttgtgcagatcagaggttctgttccactgttttgggagcaactg
gcacttcaggtgggttctcgtcatctaaggcttaacagaggtctggaagctaatgcacct
gcctttgacagacatatgatgcttctgaaagagcagtatggaaaacaagtgatcgttaac
ctgttgggaagcagaggaggggaggaggtgctcaacagagcttttaagaaactgttatgg
gcctcttcccacgcggcggacactcccatgataaactttgactaccaccaatttgcaaaa
ggtgggaaaactgaaaaactggaaaacttgttgaggcctcagctgaagttgcactgggaa
gactttggaatcttcacaaagggcaagaatgtaagtccacgtctgcagacaggtactttt
cgaatgaattgtttggactgcctggatcgtaccaatagtgtacagtccttcattgcactg
gagatcctgcttgctcaattagagagccttgggttgaactctaaatctataattgagcgc
tttgtggaatcctacaaagtgatgtggactctcaatggtcataatctgagcagagtattt
actggcagtcgtgcccttgaggggaagcacaaggttgggaaactcaaggatggcgcccgt
tctgtctctcgcaccattcagtcaaatttctttgatgcagtaaagcaggaagccatcgag
ttgctgctcatgggtgacttcttcagcgaggaatatgcagacaaaggcaaaatgcttatg
gaccacactgcactgctggtaactccaagtattttgaaggccatgtcagagcgtcaattt
gaattcacaagcttcaagcgcattcgtgttgccacggggacctggaatgtgaatgggggg
aagcagtttcgaagcaacatcctcggtaccagtgagctgactgactggctgctggattct
cccaagctttctggagtttctgaatttcaggatgataactgtcctcctgacatatttgca
gtgggatttgaagagatggttgaattaaatgcagggaatatagtgaatgccagtacaacg
aatagaaaaatgtggggggaacagcttcagaaagctatttccaggactcatcgctacatt
cagctgacatcagcacagcttgttggtgtttgtcttttcatctttgtacgaccctatcat
gtccccttcatcagggatgtagcaatagacactgtgaagacaggaatgggaggaaaagct
ggaaataaaggggcagtgagcattcgttttcagttctatagtaccagtttctgctttata
tgcagtcacttaactgctgggcagactcaggtgaaagagcggaatgaagattataaagaa
atcacacagaaactcagcttcccaatggggcggagcgtgttctcacatgactatgtcttc
tggtgtggtgattttaactatcgcattgatctgacatatgaggaagtcttttattttctc
aaacgtcaagattggaagacacttctggaatttgatcaactgcaacagcaaaaatccagt
ggaaaaatttttaaagacttccatgaagggactattaattttggaccaacatataaatat
gacgttggctcagaggcttacgatacaagtgataagtgcagaaccccagcttggactgac
agagtgctttggtggagaaagaaactgccttttgaaaaaacagctggagagatcaatctt
ctagacagtgatctgaatgctgaaactaaagtcaggcacacctggacccctggagctttg
atgtactatgggagagcggagctgcaagcatctgaccacaggccagtgttagctattgta
gaagtagaagttcaggaagttaatcaagctgcccgcgagagtgttttccaggaagtgtca
tctttccagggaccactggatgccacagtggttgtaaacttgctgtcgccaacgcctgaa
gagaaaaatgagtttcctgaggacttgcgtacagagcttatgcaaatgtttgaggattat
ggcactattgttctggtcaggatcagtggaggtcaaatgctggtgacatttgcagacagc
aagtcagctcttcgtgttatggatatagatggtgtcaaagtcagaggcagaacagtgaag
atccggcccaagaccaaggattggctaaaaggccttcaggaggaaattgctcgaaaacgg
gacagcattgcccctgtgtctcccatggcaaactcctgccttctggaagaaaattttgac
ttctcgagtttggactatgattcagaaggtgatatagtggaggatgaagatgattattta
gatgatgctttgtgtcaacacctagtagaagatatgccggagggctgtggacatttcaca
tccacagatcattcagacaaatctggacaaatcccacggctatataaagatgatacagac
ctgggcaatttgaagcaagagctcgaggcaagtggggaacgccaccgccggactccaagc
aggtctctgtccattcctaccaggactcggccacttcagccacctcagaggcctccacct
cctgctggaacaccaggcaaaaagtccccctcagacagttccctccctccaggaagctct
tccgcctgctccatcctggcaacagcaaagctgctacctggagcccctcagcagccacct
aaagtccgaactggaataagtaaaccttacaatgtcaagcagatcaaaaccaccacagct
gaggaagcagaagaagctattagatgtcttatggaagctaaaggaggactacaggaagat
gcagtaaagtccacttcaactagaaaccaaatgttcaccaaacctgagcctcttcccacc
atcgcaaagtcaacatcatgtcaagggtctcaggcaggaccagtgcttgtgccccatcgc
ccaccacccaaagttccaactacgaagaagccagtacctctgcaaaggaccacagtcaag
gtggaaaatgccctgcctacagaagagcaatttgaccaacagccagtattacctcctttt
ggcttgtcagagccctgtctagaagctggaactattcttagtccaacaaagattactcca
gtccctaaacccagaatactacaacctgagaagcctcaggagagcaggggaagcagcgaa
aggcagctcccctcagcaagcacagctgaggccagtatgctgcctccccaaaacgcttcc
tttgccccaaaggtgccaccacgaagaaagaaatctgctcctgcagctcttcatctgcaa
gttctccagagcagtgacaacccactttttagtgggttaatgttcaactccaacaacaac
aataatcctgggttctgcccccagactcaggacgttcccatccctgcacggtctactctc
gcagctcctacatcttctgccagtctagaaaacagcacaattaagcagttggcaccaaat
gctgcagaattgatagctaaccttcagggccctcccatagcaggcggccagcatccacag
ctctctcctagcagctcccttctagaaaacaccaatcttttggacctggacacagattct
tcctgccctgcttccatacaggcagcatcaactacttctccagcacacactccagaaaat
ttaaaatgccccagcttgaaagatttcagtcactgggttacatttagcgatgatgaagac
agcagtgcgctggcagaagggttcaaactgcttgccttagaacaaaacaaaaaaacctta
aagaacacaaattctgatttagaattgtaa
DBGET
integrated database retrieval system
