Cuculus canorus (common cuckoo): 104061597
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Entry
104061597 CDS
T08597
Symbol
USP25
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cuca01002
]
104061597 (USP25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104061597 (USP25)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104061597 (USP25)
Peptidases and inhibitors [BR:
cuca01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104061597 (USP25)
Ubiquitin system [BR:
cuca04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104061597 (USP25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UIM_2
UBA_4
DUF5725
Motif
Other DBs
NCBI-GeneID:
104061597
NCBI-ProteinID:
XP_053921442
LinkDB
All DBs
Position
1:complement(103622326..103713659)
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AA seq
1117 aa
AA seq
DB search
MTVEQNVLQPGGAAKHQQTFLNQLREITGINDIQVLQQALKDSNGNLELAVAFLTAKNAK
VPQLEEATYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRET
GITDEEQAISRVLEASIAENKASLKRTHPEVWSDSPNPYDRKRQDNCPVGLKNVGNTCWF
SAVIQSLFNLLEFRRLVLNFNPPANAQDLPRNQKEHRNLPFMRELRYLFALLVGSKRKYV
DPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQIKAEEEREGEKPKNPMVELFY
GRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSAKSGQE
HWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPPILYLDRYMHKNREITRIKRDEIK
RLKEYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDLGGSATASG
TLPTQTLPSTVEQQGPSSSDVPSTSPVQRSVIHKPFTQSRIPPDLPMHPAPRHMTEEELS
VLEGCLHRWRTEVENDTRDLQESISRIHRTIELMYSDKTMVQVPYRLHAVLVHEGQANAG
HYWAYIYDHHQNRWMKYNDISVTKSTWEELERDSFGGYRNASAYCLMYINDKEQYLIQEE
FNKETGQMLVGMDTLPSDLRDYVKEDNKRFEKELEEWDAELAQKAQQEKLLSQIPRAPAP
SPAPVQAGEPEYLEQPSRTDISKHLKEDSVQAINKALAEQEDRSPEAIMDTSSDNAPAQP
APNQRVVEVAIPDVGTFVIESEEGGYDDEVMLTPNMQGIIMAIGKARNVYDRCGPEAGFF
KAIKLEYTRLLKLAQEDPPPECDYRLRHAIVYFIQNQAPKKIIERTLLEQFGDHNLSFDE
RCRNIMKVAQAKLEMIKPDEVNMEEYERWHQDYRHFRETTMFLMVGLEFFQKKSYMEALL
YLIYAYQNNKELLSKGPYRGHDEELISHYRRECLLKLNEHAAALFESGDDQEVNNGLIIM
NELIVPCLPLLLVDEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTE
IKGFNDPPKLPSYSTHELCERYARIMLSLSRTPADGR
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggagcagaacgtgctgcagcccggcggcgccgccaagcaccagcaaacattt
ttaaatcagctgagggagatcactggtatcaatgacatccaggtactacaacaggcactg
aaggacagcaatggtaatctggagttggctgtggctttcctcaccgcgaagaatgccaaa
gttccccagctagaggaggcaacttactaccaaacagcccttcctggaaatgacagatac
atcagcgtgggcagccaggcagacaccaatgtgattgatctcactggagatgataaagat
gatcttcagagggcaattgccttgagtttggaggaatcaaacagggcattcagggagact
ggaataacagatgaggaacaagccattagcagagttctagaagccagtattgcagaaaat
aaagcaagtttaaagaggacacatccagaggtatggagtgactctccaaacccttatgat
cgaaagcggcaagacaactgtccagtaggattaaagaatgttggcaacacatgctggttt
agtgctgtcattcagtcattatttaacctactggaatttcgaagactagttttgaatttc
aatcctcctgcaaatgctcaagacttgccccgaaaccaaaaggaacataggaatctgcct
ttcatgcgtgaattgaggtacctgtttgcacttctagttggttcaaagagaaaatatgtt
gacccatcaagagcagttgaaatccttaaagatgctttcaaatcgaatgattcccaacag
caagatgttagtgaatttacacacaaattactagattggctagaagatgccttccaaatt
aaagccgaagaagagagggaaggagagaaaccaaagaacccaatggtggagttgttttat
ggacgatttctagcagtaggtgtacttgaaggtaaaaaatttgaaaacacagaaatgttt
ggccagtatccactccaagttaatggctttaaagatctgcatgagtgcctagaagctgcg
atgattgaaggggaaattgaatctctccattcagagaactctgcgaagtctggtcaggag
cattggttcactgagcttcctcctgtcttaacttttgagctatcaagatttgagtttaat
caggctttggggagaccagagaagatacacaacaaattagaatttcctccaattttgtat
ctggacaggtatatgcacaaaaacagagaaataacgagaattaaacgggatgaaatcaaa
agactcaaagagtacctcacggttttacagcagagattagaacgatatttaagctatggt
tctggtcctaaacgattccccttggtagatgtcctgcagtatgccttggagtttgcctcc
agcaagccggtgtgcacgtctcctgtcgatgacctgggtggtagtgccactgccagcggc
acactgccaacccagacactgcccagcacagtagagcagcaggggccttcatcttcagat
gtcccaagcacatctcctgtacaaagatcagtgatacataaaccattcactcagtcacga
attcctcctgatctgccaatgcatccggcaccaaggcacatgactgaggaagagctgtct
gtcctagaaggctgtttacatcgctggaggactgaagtagagaatgacactagagactta
caagaaagtatatctagaatacatcggacaattgaattgatgtactctgacaaaacgatg
gtccaagttccttataggttgcatgctgtgctagttcatgaaggtcaagcgaatgcagga
cactactgggcatatatttatgaccatcaccagaacagatggatgaaatacaatgatatt
tctgtgacaaagtcaacttgggaagagttggaacgggactcttttggtggttacaggaat
gccagtgcatattgtttaatgtatatcaatgataaggaacaatacttgatacaagaggag
tttaacaaagaaacaggacagatgcttgttggaatggacacgctaccttctgatctgagg
gattatgtaaaggaagacaataaacgttttgaaaaagaacttgaagaatgggatgcagaa
cttgctcagaaagcacagcaagagaagctgttatctcagatacccagggcaccagcaccc
tcacctgctccagttcaagcaggagaaccagaatatttagagcagccatcaagaactgat
atttcaaagcacttaaaagaagattctgtacaagcaatcaataaagctttagctgaacaa
gaagatagaagcccagaagccataatggatacgagctctgataatgccccagctcaacca
gctcctaaccagcgagttgtagaggtggcgattcctgatgtagggacttttgtgattgag
tcagaggaggggggttatgacgatgaggtcatgctgaccccgaacatgcaaggtattatc
atggctataggtaaagccaggaatgtttatgacaggtgtgggccagaagcagggttcttt
aaggcaattaaattggaatacacgcgtctgctaaaattagcccaggaagatccaccacct
gaatgtgattaccgtttgcgtcacgcaattgtttacttcatccagaaccaggcaccaaag
aagataattgagagaacattactggaacagtttggcgatcacaatcttagctttgatgaa
aggtgccgtaacataatgaaggttgctcaagctaaacttgaaatgataaagccagatgaa
gtgaacatggaggaatacgagagatggcatcaagactatagacatttcagggaaacaacc
atgtttctcatggtaggattggagtttttccaaaaaaagagctatatggaagccttgctc
taccttatctatgcttaccagaataacaaagaactcttgtccaaaggcccgtacagaggg
catgatgaagagctgatatctcactacagacgagaatgtttgctaaaactaaatgaacat
gctgcagcactatttgaatcgggagatgatcaggaagtaaataatggcctgatcattatg
aacgagcttattgtcccatgtttgccattactactggtggatgaaatggaagaaaaagat
attgttgctgtggaagatatgagaaaccgttggtgttcctatcttggacaagaaatggaa
cctaacttgcaagaaaagctgacagatttcctgccaaaactgctagattgttctacagag
attaaaggattcaatgacccgccaaagctaccctcctactccacacatgaactgtgtgaa
agatacgcccgaatcatgttgtcactcagtcgaactccagctgatggaagataa
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