Cuculus canorus (common cuckoo): 104061699
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Entry
104061699 CDS
T08597
Symbol
LTBP2
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
104061699 (LTBP2)
Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
104061699 (LTBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
Fibrillin_U_N
Plasmod_Pvs28
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
104061699
NCBI-ProteinID:
XP_053923159
LinkDB
All DBs
Position
5:complement(67360301..67429668)
Genome browser
AA seq
1746 aa
AA seq
DB search
MRGAAASLLPLTFAALLGFAGCRPDSAAGLEPGARGAARGRGSAPGAAGTAQRPSPAPGA
PPPARPLPAALHVERGAAGTPGGDGRRQSPAPRHRASDAGPGRRSGPEPSRQRQGSGLKA
RVVPRAKEPSGRGRMTGPNVCGRQCCPGWTTAPGTNHCIKPVCDPPCQNKGSCSRPQVCT
CRSGFQGSRCEEVVPEQEYHPPGAAAAFQPSTSSLRRRTSMAGRDASLRGAQAPVPRHIP
AVSQSRIGSPVSLQHTGPSRTVRRYPASNDQLTSNALPNGNGREQSSSGPHTVSQEQSLS
ARGANLTEKIRKIKIVFTPTICKQTCRSGRCYNSCEKGDTTTLYSQGGHDHDPKSGFRIY
FCQIPCLNGGRCVGRDECWCPSNSTGKFCHLPAPSLEKKQGGRAPKTPAGSSTKHSTYTL
PLSNQLASLNPSLVNVHINHPPEATVQIHQVARVRGDPEVSEENSVEAVLVPQLAAVPWY
TYTHGNGNSIATESGQQQQRTPGLLGRCFREALHGQCTNPVPGLTRLEDCCGSVGLFWGT
DRCLACPPRPAHPVIENGQVECPQGYKRMNRSHCQDINECLMQGLCKDAECVNTRGSFRC
TCKPGTMLDPSRSHCISDKAVSMEQGLCYRSAAGGVCSFPLSHRITQQICCCSRVGKGWG
KNCEECPMPGSEAFKEICPAGHGYTYSSSDIRLSMRKAEVEELPFSLEEQGESSNWTLGW
AARRQQPQDSLRGSILEAFPHRVTLAGEGEVSPAGQGAADATAQPARGEPATRRAEDEEY
WRGPPQPGPTTVWDAAPPTQMPAQSAGVGNCASSPLSCGAGTCVLTPEGYRCFCHPGYVL
DPSRLHCIDEDECLKDPCAGKGRCINSVGSYLCLCYSGYTLAVLEGKQSCEDRDECEQPS
TCQGQRCINTVGSYRCECKEGFAMGSRGQCEDINECVDPSPCPRGKCVNTLGSYKCVSCG
DGYQPRNGRCVDVNECLAEGTCAHGRCVNLDGSFRCSCYRGYKVASDGKSCQDVDECASQ
AACPSRLCLNTEGSYSCMACDAGYTISKDGSTCEDMDECEDPAVQCLGGECRNTPGSYQC
LCQAGFELLNGTVCEDVNECLNSEICSPNGECLNSHGSYFCICAPGFLNTAGGVSCQDVD
ECADRSRCSQGQCLNTEGSYRCLCENGFKHSQETDDCVDVDECKEYGDAICGTWRCQNSP
GSYRCIMGCQPGFHWTPLGDCIDIDECANETLCGSHGFCENSDGSFRCLCDRGYESSPSG
HYCVDVNECELMVAVCGTALCENVEGSFLCLCPSDHEEYDTEAGRCQPRAAVEGPGTHAA
HLSDSTERKQCYYHISDVRLCDSVLAKNITKEECCCTVGAAWGDNCETYPCPVPGTVEYQ
EICPLGKGYVPKEDLLSGKVSFTDMDECEIFGSEFCRNGQCLNTVPGYKCFCRTGYFYDS
SRLECVDQDECQNEVYCINGECLNTDGSYHCFCSLPLVLDATGNRCVNLSSRADALEEYE
IHLDVCWQTVADYICQDLLRGEQTTYTECCCRLGEAWGQNCALCPHRSSADFAFLCNGAS
EDSERGAELRERPRYEYGLGLEDPHYGLPSPDMGPYYNYLESEYGNPDAGFPRREHNSEF
HGSSLHHGPGRSPPRYLPSQTGLYEGFEGLQAEECGILNGCENGRCVRVREGYTCDCFDG
FQLDMTRMACVDINECEEVGSPEPLCQGGTCENTEGSYRCHCLPGYVALARTHHCVPQTA
QSPAAA
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgccgccgccagcctcctcccgctcaccttcgccgccctcctgggcttcgcc
ggctgccggcccgactcggcggccgggctggagccgggggcgcggggggcggcgcggggc
cggggctcagccccgggggcggcgggcacggcgcagcgcccgtccccggctcccggcgcc
cccccgcccgcgcggcccctccccgccgccctccacgtggagcgcggcgccgcgggcact
ccgggcggcgacggccgcaggcagagccccgcgccccgccaccgggcgagcgatgccggc
ccggggcggaggagcggcccggagccctcccgccagcggcagggcagcgggctgaaagcc
cgggtcgtgccccgcgcgaaggagccgagcggcagagggaggatgacggggccaaatgtc
tgcggcagacagtgttgcccaggatggaccacggctcccggcacaaaccactgtatcaaa
cctgtctgtgacccaccgtgccagaacaagggctcctgcagccgtcctcaggtctgtacg
tgtcgttcgggcttccaaggctcccggtgcgaagaagttgttcccgagcaggagtaccac
ccgcctggtgccgctgccgccttccaaccctccaccagctccctccgtaggagaaccagc
atggcagggcgagatgcctccctgcgaggggctcaggcacccgtcccgcggcacatccca
gctgtgtctcagagcagaattggctctcctgtctccctccagcacacagggccgtcacga
actgtccggcgctaccccgccagcaacgaccaactcacatctaatgcactccccaatggg
aatggacgtgagcagagcagctctgggccacacactgtttcccaggagcagagcttgtct
gcaaggggggccaacctgacagaaaagattaggaagataaaaatcgtcttcacacccacc
atctgcaaacagacgtgccggagcgggcgctgctacaacagctgtgagaaaggagacacc
accactctctatagccaaggcgggcatgaccacgatcccaagtctggcttccgtatctac
ttctgccaaattccctgcctgaatggagggcgctgcgtgggccgggatgagtgctggtgc
ccctccaactccacggggaagttttgccacctgccggctccctctctggaaaagaagcaa
ggagggagagcccccaagaccccagctggcagctccacgaagcactccacctacaccctg
cccttgtccaaccagctggcttccctgaacccttccctggtgaacgtccacatcaaccac
cctccagaagccactgtgcagattcaccaggtggcgagggtgcgcggtgacccggaggtg
tcggaggagaacagtgtggaggcggtcctggtgcctcagctagctgctgtgccctggtac
acctacacccacgggaatggcaacagcattgccacagagagcgggcagcagcagcagaga
accccagggctgctggggaggtgctttcgggaggctctgcatgggcagtgcaccaacccc
gtgccagggctgacgaggctggaggactgctgtggcagtgtggggcttttctggggtacg
gaccggtgtctggcctgccctccccggccagcacaccctgtgattgagaatgggcaggtg
gagtgtccccagggatacaagaggatgaaccggagccactgccaagatatcaacgagtgc
ttgatgcagggcctgtgcaaagacgccgagtgtgtgaatacccgtggcagcttccgctgc
acctgcaagcctggcaccatgctggacccatcccgcagccattgcatctcggacaaagca
gtgtctatggagcaggggctgtgttaccgctcagcagccggaggcgtgtgctctttcccc
ctctcccaccgcatcacccagcagatctgctgctgcagccgcgtcggcaagggctggggg
aagaactgtgaggagtgtcccatgcccggctcagaagctttcaaggagatttgtccagca
ggacatggatacacctactccagctctgatatccgcctgtcgatgaggaaggcagaggta
gaagagctgcccttcagcttggaagagcaaggagagagcagcaactggacattgggctgg
gcagcaaggagacagcaaccgcaggacagcctgcgtgggagcatcctggaggcattccct
caccgtgtcaccttggcaggtgaaggtgaagtttctcctgctgggcagggtgctgctgat
gccactgcgcagcctgccagaggtgagcccgccacacgcagagcagaggatgaagagtac
tggcgtgggcctccccagcctggccccaccaccgtctgggatgctgctcctcctacacaa
atgccagctcagagtgcaggggtcggcaactgtgcatcttcacccctctcctgtggagct
ggcacatgtgtgctcaccccagagggatacaggtgcttttgccaccctggctatgtgttg
gaccccagccgcctccactgcatcgatgaagatgagtgcctgaaagatccttgtgctgga
aaaggtcgctgcatcaacagcgtgggctcctatttgtgcctgtgctactctgggtacacc
ctcgctgtcttggagggcaagcagagctgtgaggatcgagatgaatgtgagcagccctct
acctgccagggacagcgatgcatcaacactgttggctcctaccgctgcgagtgcaaggag
ggctttgccatgggttcaagaggacagtgcgaagatatcaacgagtgcgtggatcctagc
ccttgtccccgtgggaagtgtgtcaatacgctaggctcctacaagtgtgtcagctgtggg
gatggctaccaacccaggaatgggagatgtgttgatgtgaacgagtgtcttgcggagggg
acctgtgctcatggacggtgtgtcaacctggatggctccttccgctgttcctgctaccgg
ggctacaaggtggcgtctgacgggaagagctgccaagatgtggatgagtgtgcgtcccag
gctgcctgtccctccagactctgcctcaacactgagggctcctactcctgcatggcttgc
gacgccggctacaccatttccaaagacggcagcacatgtgaagatatggatgagtgtgag
gaccctgctgttcagtgcctggggggagagtgcaggaacaccccaggctcctaccagtgc
ctctgccaggctggcttcgagctcctcaacggcactgtgtgtgaagatgtgaatgagtgc
ctgaacagtgagatctgcagccccaacggcgagtgtctcaacagtcatgggtcctacttc
tgcatttgtgctcctggcttcttgaacacagctgggggagtcagctgccaagatgtggat
gaatgcgcagacaggtcccggtgctcgcaaggccagtgcttgaacacagaaggctcctac
aggtgtctgtgtgaaaatgggttcaaacattcccaggagactgatgactgcgtagacgtg
gatgagtgtaaagagtatggggatgccatctgcggcacgtggcggtgccagaacagccca
ggctcctaccgttgtatcatgggctgccagcccggcttccactggacccccttgggtgac
tgcatcgacatagatgagtgtgccaacgagacgctgtgtgggagccacggcttctgtgag
aactcagacggctccttccgctgcctctgcgaccgtggctatgagagctcaccttctggg
cactactgcgttgatgtgaatgagtgcgagctgatggtcgccgtgtgtggaactgcgctc
tgcgagaatgtggaaggatccttcctctgcctctgccccagtgaccacgaggagtacgac
acagaggcagggcggtgccagccccgagcagccgtggaaggcccagggacacacgcagcc
cacctctctgacagcacagagcgcaagcagtgctactaccacatcagtgacgttcgcctg
tgtgacagtgtcctggccaagaacatcaccaaggaggagtgctgctgtactgtgggggca
gcctggggtgacaactgtgagacttacccctgccccgtcccaggcacagtggagtaccaa
gagatctgcccccttgggaagggttatgttcccaaggaagatttgctctcaggaaaagtg
tcttttacagacatggacgagtgtgagatatttggctctgagttctgccgcaatggacag
tgtttgaacacggtgccgggctacaagtgcttctgccgtacaggctacttctatgactcc
agcaggcttgagtgtgttgaccaggatgaatgtcaaaatgaagtgtactgcatcaacgga
gagtgtctgaacacggatggctcctaccactgtttctgcagcctccctcttgtgctggat
gccactggcaaccggtgtgtgaacctctccagcagagcagatgccttggaggaatacgaa
atccacctggacgtctgctggcagactgttgctgactacatatgccaagatctgctgcgc
ggcgagcagaccacatacactgagtgctgctgccggcttggcgaagcctggggacagaac
tgcgccctctgcccacacagatcctccgcggattttgctttcctgtgtaatggggccagt
gaagacagtgagaggggggctgagctccgagaaagacctagatatgagtatggactgggc
ttggaagacccccactatggccttcccagcccagatatgggcccctactacaactacctg
gagtctgagtatggaaaccccgatgctgggttccctcggagggaacacaacagtgagttt
catggcagctctctccaccatggcccggggcggtctccaccacgctacctgcctagccaa
actggcctctacgagggctttgaggggctgcaggctgaggagtgcgggatcctcaatggc
tgcgagaacgggcgctgcgtgcgtgtccgagagggctacacctgcgactgctttgacggc
ttccagctggatatgacccgcatggcctgcgtggacatcaacgagtgtgaggaggtgggc
agccctgagcctctgtgccagggtggcacctgcgagaacacagagggctcctaccgctgc
cactgcttaccaggctacgtggccctggcccggacccaccactgtgtgccccagacagcc
cagagcccggcagcagcgtag
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