Cuculus canorus (common cuckoo): 104061826
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Entry
104061826 CDS
T08597
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cuca03037
]
104061826 (RP1L1)
04812 Cytoskeleton proteins [BR:
cuca04812
]
104061826 (RP1L1)
Cilium and associated proteins [BR:
cuca03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104061826 (RP1L1)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
104061826 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
104061826
NCBI-ProteinID:
XP_053920017
LinkDB
All DBs
Position
3:complement(69376069..69419100)
Genome browser
AA seq
2304 aa
AA seq
DB search
MTQVPADYLSTTSSFNYEQPFPSVARTSTVTKVPPAKKITFFKSGDPQFAGVKMAINHRS
FKSFNALMDDLSHRVPLPFGVRTITTPRGIHCISELDQLEDGGCYLCSDKKYVKPISITS
AGHRPGPPQNGRPSSTLRRAAQEGKLGDYSSPFTHHGPRIPKKITLVKNGEIGFRRSIIL
NRRNARSFKTLLDEISEILQFPVKKLYTVDGKKIDSMQALLHCPSMLVCVGREPFKPVLM
ENSRKHSVEKLPDLAPRSNGNNVNGNNEMDFGLKARKSVIHPRSASSNRSMRFSLSSEKS
YPNGLAASPDNGAPFSNSCSHPKPGDLVHSLVNDDIEKRVHVNKDGSLSVEMKVRFRLLN
DETLQWSTQIKKSNLMNQMPCEELGIEEDSGVDPIQKMNPEASSEADESLYPGDIDSYMS
KLEESECDEAHCHSCGKKHQDYDIWKNPMHTSQREEPSVRSTWHARSSCSSTSSRRRVVH
KKIASVDSLHTTSSEEYSEHIVQESSSYSETVENRVSYRSVKKCRCRSDLSTGASNGEDQ
QEYTRTSTSHSKRPSSLGLMSHSSCENNLDTQDVPEDHEASKTNSQNEQENCFEVSSVKC
LKDDVEEQESSRVGSVMSRSSLQSRESKKNRCEETSSGGRSMSSCSLQKANQEDDTRCLT
PADSVHSKSSNCTTPKARSEQDDHSDDNAVVSSFSSESCPKKEVEEVEGEQEENEINEVS
SVSAKTKPSQSIRGESSEGERCSTQGTSHSRASGRNSKRSDSDEIILCNASCSSRGSKKS
KHSHVHLDAKSEMSVSSLESTPNKKKNSLHADDLRSCSRASNYSKSSCEIKKKSVGDPMS
HNSGSFQSNISSTSEAEAIAGFTEEKSLKSTTNGYSESSKGSKKRSHREENSKPSSLCSS
VSSPNGKAGEGHSKINSETPSSRQGSVSESICSKAETGIRNGKPSSVSSRVSSKSEIKDK
HLLTQISQESNDQCSQSNISQSSKSRRIKARNLHVKTSNSSQASLPDTLSVPSMHCPAPP
KGKPKSRKIHTTMLKNSSISSMGSESVLTTGKEAKEIIDSSKATSYGSKSAATEVNDKKN
KEICDVCNTNVEEELEGTGTQEEGSDLMPSTLPNTSPEEVVQEWLSKIPSETLLMKYEME
DDAEEECAEATTEVSHCTNAEEISEDEKAEQKNVEEVENEAKDEVGKETAEDASVNEEIE
ECMNQEQTCETVSEAGKADQAKCSQSVTSSQNNNRRDLPTSVQTSVQIMKALLSSKHETK
FDRSNSLPEVSPTMGRKLSNSANILITCLASLQLLDEASEDPSDKSNRLNKPRYMELLNI
FQALWFGCTAEKSGPILGQETSEKVNPASGFKAPKSIDYDFTPMSSSGVDVSSGSGGSGE
ESAAGARDCTLAAQKTAEFKSAGQVRNVDAGTELTEDQEKIKEEEQSSRPSTACSKSKGE
ENVQPTREESLIQEAEGDEKEQCSNCENGQEEGEKNENEEDSKLTENGDQEEAEAVNNEL
TKEDINEKADQRATTDATSVNDADCGTELKGDLEEQLEKQSSNDPKPSANVATSVGTSLV
QTNSVDPDPVWVLRLLKKIEKEFMTHYVSAMNEFKVRWNLQNNQQMDEMILELKEEVSKR
IQRSIEKELRKIKTRAGKKIPRPPDEPLKRESTLQTEQRRRRLQTMRKKSLFSDKNGTQS
RLEDTTDLSFDMEEDTAFSAAFEASISKQTSEEEYCPCDSCVRKKIASKPTRNPVVATNA
PVMKAFDLQQILRLKKNDEEACVSEAAQDIETIASSSVKEAGENGNSNENDEGELQPSET
EMEGNEEKEPEVNEVGSSVLNEDGEGCELSESQNHDMEDEVKDEEAEEVGEDTQERQEEE
EAKEEEEEKEEEEIMKAGEEEETKEESEGETEEKNDEEVEEETKEEEEEEKEEEEIMKAG
EEEETKEESEGETEEKDDEEVKQEAEEETKEEEEVKEEEEKEEEEETNEGEEGETKEEEE
EADEKEEDAKEEEEEETKEEEEEEEEEEEVTKEGEEAKEDEEETKEEEQEIEEKEENPEE
EEKEVEEGEEEANKEEEEQEEESQNEEQEAEEKSVAADEADNEAEEAEEPDDEDVEADDE
EETSECRGDADGCETDNNPEGDAAEGSGEAEQDEDDAVEDANPESEQEACSAEEENNGEG
DEKNAEKNEESICDNPDKAHEKHETLNKAAAFSCYSSVGNFSQESQKGSEDEDDEECKDD
NNPTSNHIDEEGQNDESSKPSQMYPDSEEEDDKGSSFTDPLGDEDQADAADANADPKEAE
HTDEVQASKKKENSDEIDQDDLDF
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggtgcctgcagactacctgtcaaccaccagctccttcaactatgagcagccc
tttccctccgtggctcggacaagcactgtcaccaaggtacccccagccaaaaaaataacc
ttcttcaagagtggagatcctcaatttgcaggagtcaagatggccatcaaccaccgaagc
ttcaagagcttcaatgcactcatggatgacctttctcatcgggtcccactgccatttggg
gtacggaccatcaccaccccacgaggaatacattgcatcagtgagctggaccagctggag
gatgggggatgctacctttgctctgacaagaaatacgtcaagcctattagcattacttct
gcaggacacagaccaggccctccacagaatggccgtccctcaagtaccttgagaagagca
gctcaggagggcaagcttggagattattcctcacctttcacccatcacggccccagaata
ccgaagaaaatcactctagttaagaatggagaaattgggtttcgacgctcaattatcttg
aaccgcagaaatgccaggagtttcaaaacactcctggatgagatttcagagatcctgcaa
ttcccagtgaagaagctctacactgttgatgggaagaagatcgacagtatgcaggctctg
cttcactgtcccagcatgctggtgtgtgttggccgggagccatttaaacctgtattgatg
gagaattcgaggaaacactcagtggagaagttgcctgacctggctccccgttccaacggc
aacaatgtcaatggaaacaatgaaatggactttggactgaaagccagaaaaagtgttatc
catccacggtcagcatcaagcaataggtcaatgagattttctttatcgtcagaaaagtct
tatcctaatggtcttgctgcctctccagacaacggtgcacctttctcaaacagttgttca
catccaaaacctggggacctggtccattccttggtcaatgatgacatagaaaaacgagta
cacgtgaacaaggatggtagcttgtctgttgagatgaaggtccgcttccgcctgctaaat
gatgagactttgcagtggtccacccagataaaaaagtccaatctgatgaaccagatgcct
tgtgaagagttaggcatagaggaggacagtggagtagaccccatacagaaaatgaaccca
gaagccagctcagaggcagatgagtcattatatcctggtgacattgattcttacatgtca
aaacttgaggaatcagaatgtgatgaggctcattgccatagctgtggcaagaaacatcag
gactatgacatctggaagaatcccatgcacacctcccagagggaagagcccagtgtacga
agcacctggcacgcacggtcatcatgctccagcacatcttcccggaggagagtagtccac
aaaaaaatcgcttctgtggatagcctccacaccacatccagtgaagaatattctgagcac
attgtgcaagagtcctcatcctactcagaaactgtagagaacagagtgtcatatagatct
gttaaaaagtgtaggtgtcgaagtgatttatctacaggtgcttccaatggagaagaccag
caagaatacactcggacaagcacgagccacagtaagagaccttcatccttgggtttaatg
tcacattcaagctgtgaaaacaacctggatactcaagatgtccctgaagaccatgaggcc
agcaaaaccaattcacaaaatgaacaagaaaattgttttgaagtttcctctgtgaagtgc
ttaaaggatgatgtggaagagcaggaaagcagcagagttgggagtgtcatgtcaaggtcc
tctctgcagtccagagagagcaagaagaatcgatgtgaggaaacaagtagtgggggtaga
agcatgtcctcctgcagcctccagaaggcaaatcaagaagatgacactaggtgcctcact
cctgccgacagtgtgcacagtaagtctagtaactgtaccacaccaaaagcaaggagtgaa
caggatgaccactctgatgacaatgcagttgtctcctccttctccagtgagtcatgccct
aaaaaagaggttgaagaggttgaaggagaacaagaagaaaatgaaataaatgaagtcagc
tcagtgtcagcaaaaacaaagcccagccaatcaattagaggtgagagcagtgaaggtgaa
cgatgctctacacaaggaacttcccattccagagctagtggcaggaatagcaagagaagt
gacagtgatgagatcattctgtgcaatgcctcttgctcttccagaggatccaaaaagagc
aagcacagccatgttcatttggatgcaaagtctgaaatgtctgtgtcttcacttgaatcc
actccaaataaaaagaagaattccctacatgcagatgatctgaggtcgtgcagcagggca
tctaattactccaaaagctcatgtgaaatcaagaaaaaatctgttggagaccccatgtct
cataattcaggatcttttcaatcaaacatttcatctactagtgaagcagaggcaattgca
ggttttactgaggagaaaagcttgaaaagtaccaccaatggctacagtgaatcttcaaaa
ggctcaaagaagagaagtcacagagaagaaaatagcaagccatcatctctctgctcaagt
gtttcaagccctaatggaaaagctggagaaggtcattccaagattaattcagagacccct
tcttcaagacaaggaagtgtgagtgaaagcatatgttcaaaagctgagactgggattagg
aatggaaagccttcaagcgtctcttcaagagtctcttcaaagtctgaaataaaagataaa
cacttgttgacccagatatctcaggaaagcaatgatcagtgttcacaatcaaatatatct
cagtcttcaaaatcaaggcggattaaagctagaaatcttcatgtgaagacatcaaactct
agccaagcatcattgcctgacactttgtcagtacccagcatgcattgccctgcccctcca
aaagggaagccaaagagcagaaaaatacatacaaccatgttgaaaaattcctccattagc
agcatgggttctgaatcagtgttgaccacaggaaaagaggcaaaagaaatcatagattcc
tccaaagcaacttcttatgggtctaaatcagctgcaaccgaagtaaatgataagaagaat
aaagagatttgtgacgtttgcaatacaaatgtggaggaagagttagaaggcacaggcaca
caggaagaagggagtgatttgatgccatctactctaccaaatacatctccagaagaagtt
gtgcaagaatggctaagtaaaatcccttcagaaacattgcttatgaaatacgaaatggag
gatgatgcagaagaggaatgtgcagaggccaccacagaggtatcacactgtacaaatgct
gaggaaatctcagaggatgaaaaagctgagcaaaagaatgtggaggaggttgaaaatgag
gcaaaggacgaagtaggaaaagaaacagcagaagacgcttctgtcaatgaagagattgaa
gaatgtatgaatcaggaacaaacttgtgagactgtgtctgaagctggcaaggctgaccag
gcaaaatgcagccagtcagttacatccagccaaaacaacaacagaagagacctgccgacc
tctgtccagacttctgtccagatcatgaaggccttgcttagttcgaaacatgaaacaaaa
tttgaccgatcaaacagtttgcctgaagtatcccctactatggggagaaaattaagtaac
tctgccaacattttgataacttgtcttgccagtctccagctccttgatgaagcgtcagaa
gatccctcagataaatcaaaccgtttgaataagccaaggtatatggagctgctaaatatt
tttcaagccctgtggtttggctgcacagctgaaaaaagtggtccaattttaggtcaagag
acaagtgagaaggtaaatccagcctctgggtttaaagccccaaagtctatagattacgac
ttcactcccatgtcctcctctggggttgatgttagcagtggttctggtggctcaggagaa
gagagtgcagctggtgccagggactgcactttagcggcacagaaaactgctgaattcaaa
tcagctggacaagtgcgaaatgtagacgctggcactgaactgactgaagatcaggagaaa
attaaagaggaagagcagtcatcccgaccttcgacagcctgctcaaaatcaaaaggtgaa
gaaaatgtgcagcctactagggaggaatctctaattcaggaggcagaaggggatgagaag
gaacagtgcagtaactgtgaaaatggtcaggaggaaggggaaaaaaatgaaaatgaagaa
gacagcaaactaactgaaaatggagatcaagaagaagctgaagctgtaaacaatgaactc
acaaaagaagatattaatgagaaagctgatcagagagccactaccgatgctacaagtgtc
aatgatgccgattgtgggacagaactgaaaggtgatttggaagagcaacttgaaaaacag
tcatcaaatgacccaaagcccagcgccaatgtggccactagtgtgggtacatcccttgtc
cagacaaactcagtggatccagatccagtctgggtcctgagactcctcaagaaaatcgag
aaagagttcatgactcactatgtcagtgccatgaatgagttcaaagtgagatggaacctg
cagaataatcagcagatggatgaaatgatactggagctgaaggaggaagtgagcaaaagg
atacaaagaagcatagagaaggagcttaggaagatcaaaactagagcagggaagaagatt
ccaagacctccagatgaaccattgaagcgtgagtcaaccctccaaaccgagcagaggaga
cggcgattgcagactatgcgtaaaaagtcactcttcagtgacaagaatggaactcagagc
aggctagaggacacaacagacttatcgtttgacatggaggaagatacggcatttagtgca
gcttttgaggccagtatcagtaaacaaacaagtgaggaggaatactgcccatgtgactct
tgtgtgaggaaaaaaatagcttccaagcccacaagaaacccagtggtggccacaaatgcc
ccagtcatgaaagcatttgatttacagcaaatcctgaggttgaagaaaaatgatgaagaa
gcctgtgtctcagaagcagcccaggacatcgaaacaattgccagcagttctgtgaaagaa
gcaggagaaaatggcaattcaaatgagaatgatgagggtgaactccagccaagtgaaaca
gaaatggaaggcaatgaagaaaaggagccagaagtaaatgaagtgggcagctcagtgttg
aatgaagatggagaaggatgtgaactatcagagagtcaaaatcatgacatggaggatgaa
gttaaagacgaagaagctgaagaagtgggggaagatacgcaagagagacaagaggaagaa
gaagcaaaagaggaggaagaagagaaagaggaagaagaaattatgaaggcaggagaagag
gaggaaacaaaagaggaatcagagggagaaacagaagagaaaaatgatgaggaagtagaa
gaagaaacaaaggaggaagaggaagaagagaaagaggaagaagaaattatgaaggcagga
gaagaggaggaaacaaaagaggaatcagagggagaaacagaagagaaagatgatgaggaa
gtaaaacaggaagcagaagaagaaacaaaggaggaagaggaagtaaaagaggaggaagag
aaggaggaggaggaagaaacaaatgagggggaggagggagaaacaaaagaggaggaggaa
gaagctgatgagaaggaggaagatgcaaaagaggaggaagaggaagaaacaaaagaggaa
gaggaagaggaagaggaagaggaagaagtaacaaaggagggtgaagaagctaaagaagat
gaggaagaaacaaaagaggaggagcaggaaatagaagaaaaggaagaaaatccagaagag
gaggagaaagaagtggaggaaggggaggaggaagcaaacaaggaagaggaagaacaagaa
gaagaaagtcaaaatgaagagcaggaagctgaagagaaatctgtagctgcagatgaagct
gacaatgaagctgaagaagcagaggagccagacgatgaggacgttgaggctgatgacgaa
gaagagacatctgaatgcagaggagatgctgatggctgtgaaactgacaacaatcctgaa
ggagatgctgcagaaggaagtggagaagctgagcaggatgaagatgatgcagtggaagat
gcaaatccagagtcagaacaggaggcatgttcagctgaggaggaaaacaacggtgaagga
gatgaaaaaaatgctgagaaaaatgaggaatctatctgtgacaaccctgacaaagcacat
gaaaaacatgaaactctgaacaaagcagccgccttttcttgttactcttctgtgggaaac
ttctcacaggaatcccagaagggatctgaagatgaagatgatgaggaatgcaaagatgac
aataaccccacaagtaaccacatcgatgaagagggtcaaaatgatgagagtagcaaaccc
tcacagatgtatcctgacagtgaggaagaagatgacaaaggttcttcattcactgatcct
ttgggagatgaggaccaggcagatgctgcagatgcaaatgcagatccaaaggaggctgaa
cacactgatgaagtccaggcttctaaaaagaaagaaaactctgatgagattgaccaggat
gacctggacttctag
DBGET
integrated database retrieval system
