Cuculus canorus (common cuckoo): 104061958
Help
Entry
104061958 CDS
T08597
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform X6
KO
K06525
integrin beta 4
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04382
Cornified envelope formation
cuca04510
Focal adhesion
cuca04512
ECM-receptor interaction
cuca04810
Regulation of actin cytoskeleton
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104061958 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104061958 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104061958 (ITGB4)
04810 Regulation of actin cytoskeleton
104061958 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104061958 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
104061958 (ITGB4)
04515 Cell adhesion molecules [BR:
cuca04515
]
104061958 (ITGB4)
04090 CD molecules [BR:
cuca04090
]
104061958 (ITGB4)
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104061958 (ITGB4)
Exosomal proteins of bladder cancer cells
104061958 (ITGB4)
Cell adhesion molecules [BR:
cuca04515
]
Integrins
Integrin beta subunits
104061958 (ITGB4)
CD molecules [BR:
cuca04090
]
Proteins
104061958 (ITGB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
I-EGF_1
EGF_integrin
PSI_integrin
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
EGF_2
SEA
Motif
Other DBs
NCBI-GeneID:
104061958
NCBI-ProteinID:
XP_009562261
LinkDB
All DBs
Position
18:complement(308589..341706)
Genome browser
AA seq
1850 aa
AA seq
DB search
MQMSCSCGTSWQPFLFYAPPFLLSNIPSHSKQLDFNRACSYLERRKRMDALPRACAPLLL
LSLLCATGLCQRSKSNRCVLSQAKSCTECIRVDKDCSFCTDESFEEPRCDLWENLLRYGC
GETSIVYTRGEMRTQQNFSINTSLQRTQVSPQGMLMRLRAGEEMNFNMDVFQPLESPVDL
YILMDFSYSMSDDLDNLKSMGQNLAEFLQALTSNYTIGFGKFVDKVSSPQTDMRPEKLRE
PWNNADSPFSFKNVIRLTNNINYFSQELRKERISGNLDAPEGGFDAILQTAVCKDKIGWR
KDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDSKGTYVYDTKQDYPSVPTLVR
LLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSSNIVELLRTAFERIRSKMDI
RADFVPKAMKTEFTSLMYEKTESGSFHITRGEVGKFNMRVKALEYIGGQHVCSLPEKDRQ
GVIHVKPSSLSDSLEVTASVVCDVCPCEQQRELNSLKCSFHGDFACGQCVCHPGWRGDMC
DCSPASSPNNEACIRPGDTEPCSGRGECLCGKCQCYSEDLRQRFDGEFCQYDVLQCPRTS
GFLCNDRGRCSKGACVCENGWEGPGCECPMSNDTCIDSRGGICNNHGSCKCGRCICDKAS
LYTSSTCEISYSLGFQAVCESIRDCVRCQAWGTGSTKGNCSACHLQIQMVEELKKEEASE
YCSFQDEEDDCTYHYTLEGDPSVLPNTTVRVQKKKECPPGSFLWLIPLLIFLILLLGLLL
LLCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLMSSDHLDTPMVRSGSLKGRDT
VRWKINNNVHKQGLPSLAATNTKELIPYGLSLRLTRLFTQSLVKPDSREGEQLRKEVEEN
LNDIFKHIPGCHKLQQTKFRLQPNSGKRQDHAIVDTVLTAPRSAKPEIIKVVEKHVSHEA
FNDLKVSPGYYTVTSDQDAHGMVEFQEAVELVDVRVPLFIREDDDDEKQLQVEAIDVPTG
IAEIGRRLVNITIIKEQASSLITFLQPAYSHSRFDKLAKIPVLREIIDNGKSQVTFRTRD
LTAKNGRDYIFTEGDLVFQPGETRKEVQVPLLELTEIDTLLHNSQLKQFAIDLLHPKYGA
KIGRYPQTTVTIADPEVVDGGPSMAGLSQVSQSPKGRLSAPLNPNAHGLSSREIRFIWFP
PPGKPLGYKVKYWIQGDPESEAHLIDVKAPSAELSNLYPFCDYEMQVCAYNAMGEGAYSD
IIHCRTLEDVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVSYGLVNEDNVPIGP
TKKVLVEDPKKRMVLIENLRENQPYRYMVKARNGAGWGPEREATINLATQPKRPMSIPII
PDVPIIDAEGGEDYDSYLMYSADVLRSPAGSKRPSVSDDSGSRWKYVQLLGEDLDLRRIT
WRLPPETIPRLSGSSRFSSDTEGLLHEEDSDMATGSLTRSRTPRPQAEHLLNGRVDFSFP
GSGSGTLTRTTNTSYHQLSLHMQQEHRVMGSSSLTRDYTMLMGHDSRLPLGIPDTPTRLV
FSALGPTSLKVSWQEPHCEKEVQGYSVQYQLLNGGEVHRLTIPSPSQNSVVVEDLLPNHS
YIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGSPFTLSTPSAPGPLVFTALSPD
SLQLSWERPRKPNGSILGYMVTCEMLHGGGEPRNICVEGDNPETTLTVPHLSENVPYKFK
VQAKTTQGFGPEREGIITIESQDGGTFSQFGGQQYMREEVYNFPTEYTTKTSMSHSSLDP
HFTDTMLTTTQRVESASSTLTKQVTKEFVSRTVMSSGTLTRQMERQFYEA
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgtcttgttcatgtggcacatcctggcaacccttcctcttctatgcacccccc
ttcctcctctccaatatccccagtcattccaagcagctggatttcaacagggcttgcagc
tacctagagaggaggaagaggatggatgcactgccccgggcatgtgccccactgctgctc
ctgtccctgctctgtgccaccggcctctgccaaaggagcaaaagtaaccgctgtgtgcta
tcccaggcaaagagctgcactgagtgcatccgtgtggacaaggactgctccttctgcacc
gatgagagctttgaggagcctcgctgtgacttgtgggagaacttgctgcgctacggctgc
ggggagaccagcatcgtgtacaccaggggcgagatgcggacccagcagaatttcagcatc
aatacatccttgcagaggactcaggtgtcaccccagggcatgttaatgcggctgcgagct
ggggaggagatgaacttcaacatggatgtcttccaacccttggagagccctgtggatctg
tacatcctcatggacttctcctactctatgtctgatgatctggacaacctcaaaagcatg
ggccaaaacctagcggagttcctgcaagccctgacctccaattacaccattggatttggc
aagtttgtggacaaagtctcatcccctcagacagacatgagacctgaaaagctgcgcgag
ccctggaacaacgcagactcccccttctccttcaagaatgtcattcgcctgaccaacaac
atcaactacttcagccaggagctcaggaaagagcgcatctctggcaacctggatgcccct
gagggcggctttgatgccatcctgcagacagcagtttgcaaggataagattggctggagg
aaggacagcactcacctgctcgtgttctccactgaatctgcctttcactacgaagctgat
ggtaccaacgtcctggcggggatcctggcgaggaatgatgagcaatgtcacctggacagc
aaaggcacctacgtgtacgacaccaagcaggactacccttcggtgcccaccctggtgcgc
ctgttgggccagcacaacatcatccccatctttgctgtcaccaaccactcctacagctac
tatgagaaactgcacaagtatttccccatctctgagatcggggtgctccaggaggactct
tccaacattgtggagctgctccgcacagcctttgagcgcatccgctccaagatggacatc
cgagctgactttgtccccaaagccatgaagacagagttcacctctttgatgtacgaaaag
acagaatctggctccttccacatcacccgtggggaagtgggcaagttcaacatgcgtgtg
aaggcacttgagtacatcggcgggcagcacgtctgcagcctccctgagaaagaccgtcag
ggagtcatccacgtgaaaccctcatccctgagtgacagtctcgaagtcacagcctcggtt
gtctgtgatgtttgcccttgtgaacagcaacgagagttgaactcgctcaagtgcagcttc
cacggggactttgcttgtggacagtgtgtctgccacccgggctggcgaggggacatgtgt
gactgctccccggcgtcgtcccccaacaacgaagcctgcattcgccccggggacacagag
ccatgctcgggccggggcgagtgcctgtgcgggaagtgccagtgctactccgaggacctg
cggcagcgtttcgatggggagttctgccagtacgatgtcctgcagtgcccgcgcacctcc
ggcttcctctgcaatgatcgtggtcgctgctccaagggtgcgtgcgtgtgtgagaacggc
tgggagggtccaggctgtgaatgtcccatgagcaacgacacctgcatcgacagccgaggg
ggcatctgcaataaccatgggagctgcaaatgtggcagatgcatctgtgacaaggcttcg
ctctacaccagctccacctgcgagatcagctactccctgggcttccaggctgtgtgcgag
agcatccgtgactgcgttcgctgccaggcctggggaacgggcagcacgaaggggaactgt
agcgcctgccacctccagatccagatggtggaagagctgaagaaagaggaggccagcgag
tactgttcattccaggacgaggaggatgattgcacgtaccactacacccttgagggagac
ccctctgtcctccccaataccaccgtccgtgtgcagaagaaaaaagaatgcccaccggga
agcttcctctggctcatcccactgctcatcttcctcatcctgctcctggggctgctgctg
ctgctctgctggaagttctgtgcctgctgcaaggcttgtctggccctgcttccctgctgc
gcacgaggtcgcactgttggcttcaaggaggaccactacatgcttcgccacagcctcatg
tcctctgaccacctggacacccccatggtccgcagcggttccctcaagggtcgggacacg
gtccgctggaagatcaacaacaacgttcacaagcagggcctcccctctctcgctgccacc
aacaccaaagagctcattccctatgggctttctctgaggctaacccggcttttcacgcag
agcctggtgaaaccggacagccgggagggtgagcagctccgcaaggaggtggaggagaat
ctgaacgacattttcaagcacatccccggctgccacaagctccagcagaccaagttcagg
ttgcagcccaattctgggaaaaggcaggaccatgccattgtggacacagtgctcaccgcc
cctcgctcagccaagccagagatcatcaaagtggtggaaaaacatgtttcccacgaggct
ttcaatgacctgaaggtttcaccgggttattacactgtgacctcagaccaagatgctcat
gggatggtggagttccaagaggccgtggagctggtggatgtccgtgtcccactattcatc
agggaggacgatgatgatgagaagcagctgcaggtggaggccattgatgtccctactggc
atcgcagagattggacgcaggcttgtcaacatcaccatcatcaaagaacaagctagcagc
ctgatcaccttcctgcagccagcctactcccacagccgcttcgataagctggccaagatc
cctgtcctgcgggagatcatagacaatgggaaatcccaagtcaccttcaggacccgggat
ctcaccgccaagaatggcagggactacatcttcacagagggtgacctggtcttccagccc
ggggagacccgaaaggaggtgcaggtccccttgctggagctgacagagatagacaccctc
ctacacaacagccagctcaagcagttcgccatcgacctcctccatcccaagtacggcgcc
aagatcggccggtacccacagaccacggtgaccatcgccgacccagaggttgtggatggt
ggcccctcgatggctggcctgagccaggtctcccagtcccccaaaggccgcctgagtgca
ccacttaaccccaatgcccacggtctcagctccagggaaatccgcttcatctggtttcct
cctccaggaaaacctctagggtacaaggtgaaatactggatccagggggaccccgagtca
gaagcccacctcatcgacgtcaaagcaccatcagcagagctgagtaacctctaccccttc
tgcgactatgagatgcaagtctgcgcctacaatgccatgggtgaaggggcttactctgac
atcatccactgccgcacacttgaggatgtacccagtgagcccggccgcttggctttcaat
gttgtctcttccactgtgacacagctgagctgggccgagcctgcagaaaccaatggggag
atcacagcctacgaagtcagttacggactcgtcaatgaggacaatgtacccattggccca
acaaagaaggtgctggttgaagacccaaagaagcgcatggtgctgatagaaaacctgcgg
gagaaccagccctatcgctacatggtcaaggccagaaacggtgctggctggggacccgag
agagaagccaccatcaacctcgctacgcaacccaagcgcccgatgtccatccccatcatc
cctgatgtccccatcattgatgcagagggaggagaggattacgacagctacctgatgtac
agcgcagacgtactccgctctcccgctggcagcaagcgtcccagcgtctctgacgattca
ggctccaggtggaaatatgtgcagttgctgggagaagacttggatcttcgccgcatcacc
tggaggctcccacctgaaaccattccccgcctctctggcagcagccgcttctcctcagac
accgagggtctcctccatgaggaggacagcgacatggctactggcagcctgacgaggagc
aggaccccccggccccaagcagagcacttgctgaacggccgggtggacttctccttccct
ggcagtggcagtggcacactgacgaggacaacaaacaccagctaccaccagctgagcttg
catatgcaacaggagcacagagtgatggggagctcctcgctgacaagagactacacaatg
ctgatgggccatgactccaggctgccgctgggcatccctgacacccccacgcgcctggtg
ttctccgccctgggacccacctcgctgaaggtgagctggcaggagccacactgcgagaag
gaggtgcagggctacagcgtgcagtaccagctcctcaatggaggagaggtgcaccgactc
accatccccagccccagccagaactccgtggtagtagaggacctgctgcccaaccattcc
tacatcttcaaggtgaaggcacagagcgaggaaggctggggacccgagagggaaggagtc
atcacgatagagtcccaggtggacccgcagagccccctcagccctgtgccaggttcaccc
ttcacgctgagcacacccagtgctcctggaccactggttttcactgccctcagccctgac
tccctgcagctcagctgggagagaccccgcaagccaaatgggtccatcttgggctacatg
gtcacctgtgagatgctgcatggaggaggggagcccaggaatatctgtgtcgaaggagac
aatccggaaaccaccctgactgtgccccacctgagtgagaatgtcccatacaaattcaaa
gtgcaagccaagaccacccaaggctttggaccagagcgagaaggcatcatcaccatcgaa
tctcaggatggaggcactttctcccagtttggaggacagcaatatatgagagaagaagtg
tacaacttccccaccgaatacaccaccaaaaccagcatgagccattcctctctggatccc
cacttcacagacaccatgttgacaacgacccagcgagtggagagcgccagcagcaccctc
accaaacaagtcaccaaagagtttgtgagccggactgtgatgtccagcggaaccctcacc
aggcagatggagaggcagttctatgaggcctga
DBGET
integrated database retrieval system
