Cuculus canorus (common cuckoo): 104061970
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Entry
104061970 CDS
T08597
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04136
Autophagy - other
cuca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104061970 (WIPI1)
04136 Autophagy - other
104061970 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104061970 (WIPI1)
03029 Mitochondrial biogenesis [BR:
cuca03029
]
104061970 (WIPI1)
Membrane trafficking [BR:
cuca04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
104061970 (WIPI1)
Mitochondrial biogenesis [BR:
cuca03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104061970 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
WD40_MABP1-WDR62_1st
DUF5711
Beta-prop_Vps41
EIF3I
BCAS3_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
104061970
NCBI-ProteinID:
XP_053939715
LinkDB
All DBs
Position
18:complement(4795300..4816309)
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AA seq
444 aa
AA seq
DB search
MEAAAGASAGPAALTCFSYNQDCTSLAIGTTTGYRLFSLSSVEQLDQVHESNEIPDVYIV
ERLFSSSLVVVVSHAKPQQMNVYHFKKGTEICNYSYSSKILSIRLNRQRLVVCLEESIYI
HNIKDMKLLKTILDTPPNTTGLCALSINHANSYLAYPGSATSGEIALYDGNTLKTACTIP
AHDGPLAALTFNSTGSKLASASEKGTVIRVFSIPGGQKLYEFRRGMKRYVNISSLVFSMD
SQFLCASSNTETVHIFKLEHLTDSRPEEPPTWSGYMGKMFQAATNYLPAQVSGMMNQDRA
FATVRLNVSGQRNICALSTIQKLPRLLVTTSDGYLYIYNLDPQDGGECVLIKKHSLLGSG
KMEENKENDLQPPLPQSYAATVARQSTVPSTSTMPGYSEDGGALRGEVIPEHEFATGPVC
LDDETEFPPIILCRGGQPGKAKRS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggccggggcctcggcggggccggcagcgctcacctgcttctcctacaac
caggactgcacctccctggcaattggaaccacaactggatacaggcttttttccttaagt
tctgtggagcaactggaccaagtccacgaaagcaatgaaatcccagatgtttacatcgtg
gagcgtctgttctccagcagccttgtggttgtggtcagccatgccaagccacagcaaatg
aatgtctaccacttcaagaaagggacagagatctgcaactatagctattccagtaaaata
ctctccatccggctgaatcgtcagaggctggttgtttgcctggaggagtcaatttatatc
cataacattaaggacatgaagcttttgaagactattctggatacgcctccaaatacaaca
ggtctgtgcgctctctcgatcaaccacgccaactcctacttggcttatcccggcagtgca
accagcggagagatcgcgctttacgacggaaatactttgaaaacagcttgcacgattcct
gcccacgatgggcccctggctgctctcaccttcaactctactggctcgaagctggcaagc
gcttccgaaaaaggcacggtcattcgtgtattttccattcctggtgggcagaagctctat
gaattccgtcgagggatgaaaaggtatgtgaacatcagctctctggtattcagcatggat
tctcagttcctctgtgcttccagcaacacggagaccgtgcacatctttaaactggagcat
ctcactgacagccggccagaagaacctccaacctggagcggttacatgggaaagatgttc
caggctgcgaccaactacctccctgctcaggtatcaggcatgatgaaccaggatcgagct
tttgccactgtccgcctaaacgtctccggacaaaggaacatctgtgccctctccacgatt
cagaagctgcctcgactgttggtgactacgtcagatggatatctgtatatctataacttg
gacccacaagatggaggggagtgtgtcttaattaagaagcacagtctacttggctcagga
aagatggaggagaacaaagaaaatgaccttcagcctccattacctcaatcttatgcagca
actgtagccagacaaagtacagtgccttcaacttcgaccatgccaggttattcggaggac
ggtggtgccctgcgtggagaggttatcccagagcacgagtttgcaactggaccagtgtgt
cttgatgacgagactgagtttcctcctataatcttgtgccgtggaggtcagccgggcaaa
gcgaagaggtcatga
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