Cuculus canorus (common cuckoo): 104061986
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Entry
104061986 CDS
T08597
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cuca01002
]
104061986 (RHBDL3)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
104061986 (RHBDL3)
Peptidases and inhibitors [BR:
cuca01002
]
Serine peptidases
Family S54: Rhomboid family
104061986 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_8
EF-hand_11
AIF-1
EF-hand_9
EH
Motif
Other DBs
NCBI-GeneID:
104061986
NCBI-ProteinID:
XP_053939627
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Position
18:3395120..3450737
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AA seq
407 aa
AA seq
DB search
MGDKQPEPHASSSPAVAASSEAEEIEVLDSEDVLPMAAEDHWKALFDQFDPDNTGYISTE
KFRSLLQRHGSELDPHKLEVLLALADSNSEGRICYQDFVNLMSNKRSNSFRQAILQGNRR
LCSKALLEETGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITITIVEVAFF
LYNGVVLDRFVLQVTHPLYLKNALLYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLV
GVPLEMVHGAARISFVYVAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNWS
GMKCQFKLLRMAVALICMSFEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVIVGITLGVII
LRNYEQRLQDQTLWWIFLSIYVIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaagcagccagagcctcacgccagctcttcccctgctgtggctgccagctcc
gaggcggaggagatcgaggtgctggactccgaggatgtcctacctatggccgcggaggat
cactggaaagccctgtttgatcagtttgatcctgacaacactggctacatcagcactgag
aagtttcgctcccttctccagagacacggctcggagctggacccccacaagctggaggtc
ctgctggccctggcagacagcaactctgaggggaggatctgctaccaggacttcgtcaac
ctgatgagcaacaaaaggtcaaacagtttccgccaagccatccttcaggggaacaggagg
ctgtgcagcaaagcgctgctggaggaaacggggctgagcctctcgcagaggctaatccgg
cacgttgcgtatgagactctgccgcgagagatagaccgcaagtggtactacgacagctat
acctgctgccccccaccctggttcatgatcaccatcactattgtagaggttgcctttttc
ctttacaatggagtggtattagacagatttgtgctgcaagtcacccatcccttatacctg
aagaatgcattactttaccacccacagctccgtgctcaggcttggaggtacctaacctac
atattcatgcatgcagggatagaacaccttggactcaatgttgtccttcagctcttggtt
ggggttcccctggaaatggtgcacggagctgcgaggatcagttttgtgtacgttgctgga
gttgtggcaggatccctggcagtgtcagtagctgatatgactgcgcctgtggtgggctcc
tctggaggcgtgtatgctcttgtctcggctcacttggccaatatagtcatgaactggtca
ggaatgaagtgccaattcaaactgctgcgcatggctgttgccttgatctgtatgagcttc
gaatttggaagagctgtgtggctgcgattccacccctccgcttacccaccgtgcccacac
cccagcttcgtggctcacctgggaggggtaatagttggaatcacccttggtgtcattatc
ctgaggaactatgagcagagactccaagatcagactttatggtggatcttcctctctatt
tatgttatttttgtcttgtttgccatcttctggaacatttttgcctacagcctgttggat
ctaaagctacctcctcctccttga
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