Cuculus canorus (common cuckoo): 104061995
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Entry
104061995 CDS
T08597
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X2
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04622
RIG-I-like receptor signaling pathway
cuca05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104061995
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104061995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104061995
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104061995
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104061995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
TRIM_CC
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
Rmp24-like
zf-B_box
zf-RING_4
AAA_28
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
104061995
NCBI-ProteinID:
XP_009562307
LinkDB
All DBs
Position
18
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AA seq
600 aa
AA seq
DB search
MSSLEEELTCSICLCLFSSPVTVPCGHNFCSSCLELSWTGLSENFSCPQCRALFAARPQL
QKNTVLCRVVEQLQGGPGAAERQEEQQQQQEEEEEDDDTVWCDSCLRAPAVQSCLTCTAS
FCSEHLRPHGDSPAFRGHQLRPPLRHLHRRLCPQHHKLLEFFCKQHNTCICSLCLLGHKP
CHTSPLQDAKANAESALKKKLLELNNQGERAARAMNTVKTSQSQTAETASRKKELIRSEF
SEIKALIEEKENQALKVIADEEKRVFNRFDYIYGVLASKKNEIQSLRDQIEMALTEADDV
LFLKRAAALQQTSTKDAFVPTNEMDQNLIHSAYQSAINLKEILKLSVTEFKEKSAEAKVP
PVKIKPHLAPSPSKPVGKKPPEPQEKKKAIKAAPTVGPQIAAAAAATKELIESFLKKSRE
ELLQYAANITLDYNTAHNKVILSERYTRMSVSDIPMNYNHHPQRFTDCFQVLGFQYFKRG
IHYWEVELHQNTFCGVGICYGSMARQGPESRLGRNSSSWCIEWFNSKISSWHNDVEKCLP
NVKTSKVGVLLHCEGGFVIFMAVGEKHNLIYKFKTNFTEALYPAFWLFSSGTVLSLCQLN
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctggaggaagagctgacctgctccatctgcctctgcctgttcagcagcccc
gtgacggtcccctgcggccacaacttctgctcctcctgcctggagctctcctggacgggg
ctctcggagaacttcagctgcccgcagtgccgggcgctcttcgcggctcgcccgcagctc
cagaagaacacagtgctgtgccgggtggtggagcagctgcagggcggcccgggggctgcc
gagcggcaggaagagcagcagcagcagcaggaggaggaggaggaggacgacgacacggtg
tggtgcgacagctgcctgcgggctccggccgtgcagagctgcctcacctgcaccgcctcc
ttctgctccgaacacctccggccgcacggcgacagccccgcgttccgcggccatcagctg
cgcccgccgctgcgccacctgcaccgccggctctgcccacagcaccacaagctcctcgag
ttcttctgcaagcagcacaacacctgcatctgctccctctgcctcctcgggcacaaaccc
tgtcacaccagccccctgcaggacgccaaagccaacgccgagtcggcactgaagaagaaa
ctgctggagctgaataatcagggcgagagagctgctcgagcgatgaacaccgtgaaaaca
agccaaagccaaactgctgagacagcttccagaaagaaagagttgatcagaagtgagttt
tcagaaattaaagctttaattgaagaaaaagaaaatcaggccttaaaagtaattgcagat
gaagaaaaaagagttttcaataggtttgattacatctacggtgttctggcaagtaagaag
aatgaaatacagtctctcagagatcagattgagatggcactgactgaagctgatgatgtt
ctgtttttgaagagagcagcagcactgcaacaaacatcaacaaaagatgcctttgtccct
acaaatgaaatggaccaaaacttgatacattctgcttatcagtctgccattaaccttaaa
gagattctgaaactctcagtgactgagtttaaggagaaaagtgcagaagcaaaagtacca
cctgtgaagattaagccccatttggcaccttctccaagcaaacccgttgggaaaaagcct
ccggaaccacaagagaaaaagaaagccattaaagctgcaccaaccgtgggaccacaaatc
gctgcagctgccgctgcgactaaagagcttattgagagctttctgaagaaatccagagag
gagcttttgcagtatgctgctaacatcacgctggattacaacactgctcataacaaagtg
attctgtctgagagatacaccaggatgtctgtctcggacatccccatgaattataaccac
caccctcagcgcttcaccgattgcttccaagtgctgggcttccagtatttcaagagaggc
atccactactgggaagtggaactgcatcagaacaccttctgcggcgttggcatctgctac
ggcagcatggcccggcaggggccggagagccgcctgggcaggaatagcagttcttggtgt
atcgagtggtttaattccaaaatatcctcctggcacaatgatgttgaaaagtgcttaccc
aatgtgaagactagcaaggttggtgtgctgctccattgtgagggaggctttgtgattttc
atggctgttggggagaagcataacttgatctataagttcaaaaccaactttactgaagcc
ttgtaccctgccttctggttattttctagtggcactgttctctctctctgccaactgaac
tag
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integrated database retrieval system
