Cuculus canorus (common cuckoo): 104062024
Help
Entry
104062024 CDS
T08597
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104062024 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104062024 (NUP85)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104062024 (NUP85)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104062024 (NUP85)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104062024 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
104062024
NCBI-ProteinID:
XP_053939176
LinkDB
All DBs
Position
18:complement(680279..693550)
Genome browser
AA seq
679 aa
AA seq
DB search
MEELDTEPPVVVVPGADPSARQLCLAWGPAEVLLCETRFGRRGPAEGGPGPSRLFVLRKD
QDIYIKSLRKLFNESHGIFLGLQRSEEELAGKTRKAQLVQVSKNYRSVMRACMEDMHQAA
ISARDPALHSQYSTQVSILSAMELIWNLCEILFVEAAAAGPLLFHLLEWVRLHVCDVDSM
VREVLSSENPSKHELFWNAVDIFVLQGRMDEARHLLSKEASANPASVNMYRILDDLMKKM
PVPSLSNTQTLTEVELKWQHWHEECQRYLQDGTFASNSRMESICKVLLGDEDAILEKKEL
MSTWYHFLVTRLLYSHPTVKPMELRFYAQSSLDLFQGGESSPEPLDTILMAAFEFEMHQV
IKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFSHHSLWQLG
VNYFDHCPEYGRVYLELHIERIPLNTEQKALKVLRICEQRQMHEQVRSICKIMAMKALRN
NRLGSALSWSIRAKDAAFATLISDRFLKDYCERGCFSDLDLIDNLGPSMLLSDRLTFLGK
YREFHRLYGEKRFAEAARLLLMLMTAHIAPCSFWMTLLTDALPLLEQKEIIFSAEQTYEL
MRCLGDLTAGKAAQQKCQDRQTQSNVRTAEQNLDSPAREHKTPAAQSKGRGPREAPGVVQ
LFQRPCRTRPTSDLSDEGR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactggacacggagccaccggtggtggtggtgccgggcgcggacccgtctgcc
cggcagctctgcttggcctggggccccgctgaggtgctgctgtgcgagacccgcttcggc
cgcagagggcccgcggagggggggcccggcccctcccgcctcttcgtgctccgcaaggat
caggacatctacatcaagagtctgcggaagctcttcaacgagtcgcacgggatcttcctg
ggcctgcagcgcagcgaggaggagctggcgggcaagaccaggaaggcgcaattggtccaa
gtgagcaaaaactaccggtcggtgatgagggcctgcatggaggacatgcaccaggccgcc
atttccgcccgggacccggccctgcacagccagtacagcacccaggtttccattctctct
gcgatggagctgatctggaacctgtgtgagattctgtttgttgaagcagctgcagctggt
ccccttctgtttcacctcctggagtgggttcgacttcatgtctgtgatgtggacagcatg
gtccgtgaagttctgagcagtgaaaacccatcaaagcacgagctcttctggaatgcagtg
gacatctttgtgctgcaaggccgaatggatgaagcgcggcacttgctctccaaggaagcc
agcgccaatcctgcgtcggtgaacatgtacaggatcttggatgacctgatgaagaagatg
ccagtgcccagtctcagcaacacgcagacgctgactgaggtggagctgaagtggcagcac
tggcatgaagaatgtcagcggtatctacaggatggaacttttgcttccaattcccgcatg
gaatccatctgcaaggtcctgctgggagacgaggatgccatcctggagaagaaggagctc
atgagtacgtggtaccactttctggttacccggctcctgtattcccacccgacggtgaag
ccaatggagctgcgcttttatgcccagtctagtctggacctgttccagggcggagagagc
agcccggagcctctagacaccatcttaatggcagcctttgaatttgagatgcatcaagtg
atcaaggaatgcagcatcgccctgagcaactggtggtttgtggctcacctgacggacctg
ctggatcactgtaaactcctgcagtctcacaatctctattttggttcaaatatgcgtgaa
ttccttctgctggagtacgcctcgggactcttctcccatcacagcctgtggcagctgggg
gtcaattacttcgaccattgcccagagtacggccgggtgtacttggagcttcacatcgag
cggatacccctgaacacggagcagaaggccctcaaagtgctgaggatatgtgagcagaga
cagatgcacgaacaagttcgcagcatctgtaagatcatggccatgaaagctctgcggaac
aaccgactgggctctgccctgtcctggagcatcagagctaaggacgctgcttttgctacg
ctgatatcggatcgattcctcaaggactattgcgagaggggctgcttctctgacctggac
ctcattgataacctggggccgtctatgctgctcagcgaccggctgacattccttgggaag
taccgtgagttccaccggctctatggggagaagcgcttcgccgaggccgcacggctgctg
ctgatgctgatgacggctcacatcgcgccctgctccttctggatgacgctgctgacagac
gcccttcccctgctggagcagaaggagatcatcttctcagccgagcagacgtatgagctg
atgcgatgcttgggagacctgacggcagggaaggcggctcagcagaaatgccaggacaga
caaacccagagcaacgtgagaaccgctgagcagaacctcgacagtccagctcgagagcat
aaaactcctgctgcacagagcaagggacgagggccaagggaagctcctggcgtggttcag
cttttccagcgcccctgcagaactcggcccacatcagatctgtctgacgagggcagatga
DBGET
integrated database retrieval system
