Cuculus canorus (common cuckoo): 104062030
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Entry
104062030 CDS
T08597
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104062030 (TSEN54)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
104062030 (TSEN54)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
104062030
NCBI-ProteinID:
XP_053939564
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Position
18:complement(487430..495610)
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AA seq
512 aa
AA seq
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MEPGGAGGTGAELAQPRGRRAPRRGPKEFLPDGSAEQAERLRRCREEQWRLLAEEHPPRP
RNLVKAEWKPEQGIVELQSPAGKFWHTMGFSERGKQCLLPEEALYLVECGTIQLFYKDQP
LSVQEAYEMLLSQEAVSLPHYQVFSHLKQLGYVVLRFDPSTVLSPYERQLNLESHCQSSG
KHHRKRRRSSSPRLHEKKHKVSEDLPEAEGTSKNAGDDCEDSSCLPVDEKPLSKQPKESD
AGSGEGQSNPVPLGTGQKDSLSPTRSQADHKESSAGTRAPRWDFTTIILPNMAPDQPCTH
LPSPDNGLLPENVPGREVDAASWCARINQKQEKLSRKEREQRERESRYKSSVNADQEVRC
CSNWQEYKALLEQRSQQRVWRRPPHLWDQAVTPLLQPDEATSTAALLQQISVLQPSHILD
GTSGQQEDPEDLKIDFNVYQADAVARFKKTNPGKPHVRMCVRSFDEDIPSLRALKQVTYQ
SGDVPVVFALVDYGEIAFYSLKEFKLPVDVND
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaacccggcggggctggaggaacgggtgcggagctggcgcagccccgcgggcgcagg
gcccctcgccgcggcccgaaggagttcctgccggacgggtcggcggagcaggcggagagg
ttgcggcggtgccgggaggagcagtggcggctgctggccgaggagcacccgccgcggccg
aggaatctggtgaaggctgagtggaagccagaacagggcatcgttgagctgcagtcccct
gcgggaaagttctggcacaccatggggttctcggagcgtggtaaacagtgcctgctgcct
gaggaggctctgtacctggtggagtgtggcaccattcagctcttttacaaagatcagccc
ctgtcagtccaggaagcctacgagatgctgctgtcgcaggaggcagtgagcctgccgcac
taccaggtgttcagccacttgaagcaactgggttatgttgtactgagattcgaccccagc
actgtcctgtctccctacgagaggcaactgaacctggaaagtcactgccagagctctggg
aaacaccatcgcaaaaggaggaggagttccagccccaggttgcatgagaagaaacataaa
gtatctgaggaccttccagaagctgaagggacctccaaaaatgctggagatgactgtgaa
gactccagctgccttcctgtggatgaaaagcccttgtcaaagcagccaaaggaatcagat
gctggcagtggagaggggcagtcaaacccagttcctcttggtactggacaaaaggactcc
ctgagccccaccagaagccaggctgatcacaaggagagcagcgctggcacccgtgcaccc
cgctgggatttcaccaccatcatcttgccaaacatggccccagaccagccgtgtacacat
ctgccctcgcctgacaacgggctcctgccagagaacgtgccagggagggaagttgatgca
gcttcctggtgcgcgcggatcaatcagaaacaggagaagctgtcacggaaggaaagggag
cagcgagagagggagagcaggtacaagagcagtgtcaacgctgaccaggaggtgaggtgc
tgctccaactggcaggagtacaaagcacttttggagcagaggagccagcagagggtttgg
agacgaccgccacatctctgggaccaagctgtcacaccgcttttgcagccagatgaagct
acctcaacagctgcgctcctccagcagatcagcgtgctgcagccctcccacatcctggat
ggaacctccgggcagcaggaggacccagaggacttgaagatagacttcaatgtgtatcaa
gcagacgctgtggccaggtttaagaagacaaaccctgggaagccgcatgtcaggatgtgt
gtcaggagctttgatgaggatattccatcccttcgggctttgaagcaggttacgtatcag
agtggggatgtcccggtggtctttgcgctggtggattatggagaaattgccttttattca
ctgaaggagttcaagctgccagttgatgttaatgactga
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