Cuculus canorus (common cuckoo): 104062047
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Entry
104062047 CDS
T08597
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104062047 (SSRP1)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104062047 (SSRP1)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
104062047 (SSRP1)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
104062047 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
104062047
NCBI-ProteinID:
XP_009562359
UniProt:
A0A091G976
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Position
5:complement(69006147..69014452)
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AA seq
706 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSEFFRAHYRLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDE
SFNPGEEDDDVAEEFDSNASASSSSGDGDSDRDEKKPAKKAKIVKDRKPRKKQPESKKGK
DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
ARRDYERAMKEYSVGGRSESSRMERSKKKKKKQEKQMKGKAEKKGTFSKSSSSTKSPAKN
SSETFKSKEFVSSDESSSGESKKEDSDDEGAASPARSSEDSASASD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgctggagttcaacgagatctaccaggaggtgaaaggatccatgaatgat
gggcgactccggctcagccgccagggcgtcatcttcaagaacagcaagacgggaaaagtg
gacaacatccaggcctcggagctggccgagggtgtctggcggcgtgtggcgctgggccac
ggcctcaagctgctcaccaagaatgggcatgtgtacaagtacgatggattccgggagtcg
gagtttgacaagctctcagagttcttccgtgcccactaccggctggagctggcagagaag
gacctgtgcgtgaagggctggaactggggcaccgtgcgcttcggtgggcagctcctctcc
ttcgacatcggggagcagccagtatttgagattccgctgagcaacgtctcccagtgcacc
actggcaagaacgaggtgacgctggagttccaccagaatgatgatgctgaggtctccctc
atggaggtccgcttctatgtgcccccgacccaggaggatggtgttgaccctgtggaggcc
tttgcgcagaatgtcctctccaaggcggacgtgatccaggccactggagatgccatctgc
atcttccgggagctgcagtgcctaacaccacgcggacgctatgacatccgcatctacccc
accttcctgcatctccatggcaagacctttgactacaagatcccctacaccaccgtgctc
cggctattcctgctgccacacaaggaccaacgccagatgtttttcgtgatcagcctggac
cccccaataaagcagggccagacccgctaccacttcctcatcctgctcttctccaaggac
gaggacatctccctcaccctcaacatgaacgaggaggaggtggagaagcgttttgagggg
cgtctcaccaagaatatgtcgggctccctctatgagatggtcagccgcgtcatgaaggcg
ctggtgaaccgcaagatcaccgtgcctggaaacttccaggggcactccggagcgcagtgc
atcacctgctcctacaaggcaagctctggcctcctctaccctctggagcgtggtttcatc
tatgtccacaagccacccgttcacatccgcttcgatgagatctccttcgtcaactttgcc
cgtggcaccaccacaactcgctcctttgactttgagattgagaccaagcagggcacacag
tacaccttcagcagcatcgagagggaggagtacgggaagctcttcgacttcgtcaacgcc
aagaagctgaacatcaagaaccgggggctgaaggagggcatgaagcagagctatgacgag
tatgccgactccgacgaggaccagcacgatgcctatttggagaggatgaaggaggaggga
aagatccgggaggagaatgccaacgacagtagcgatggctctggagaggagacggacgag
tccttcaaccctggagaagaggatgatgacgtggctgaggagttcgacagcaatgcctcg
gccagctcctccagcggcgacggagacagcgaccgggatgagaagaagccggccaagaag
gcaaagatagtcaaggaccgcaagccccgaaagaagcagccggagagcaagaaaggaaaa
gaccctaatgctccaaagcggccaatgtcagcttatatgctctggctgaacgccagccgg
gagaagatcaagtcggatcatcccgggatcagcatcacagatctatccaagaaggccggg
gagctctggaaagccatgtccaaggagaagaaggaggaatgggatcgcaaggcggaggat
gcacggcgggactacgagagggccatgaaggaatacagtgtgggcggcaggtccgagagc
tcccggatggagagatccaagaagaagaagaagaagcaggagaagcagatgaaggggaag
gcggagaagaagggcaccttctccaagtcctcgtcctccaccaaatccccggccaagaac
tcaagcgagaccttcaagagcaaggaattcgtctccagtgacgagagttcatctggagag
agcaagaaggaggactctgacgacgagggagccgccagcccagcccgcagctcggaggac
tccgcgtctgcctcggattag
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