Cuculus canorus (common cuckoo): 104062090
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Entry
104062090 CDS
T08597
Symbol
HMG20B
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104062090 (HMG20B)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104062090 (HMG20B)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
104062090 (HMG20B)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
104062090 (HMG20B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF724
Motif
Other DBs
NCBI-GeneID:
104062090
NCBI-ProteinID:
XP_053906477
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All DBs
Position
27:264664..271224
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AA seq
319 aa
AA seq
DB search
MAHSARQLPAAMLHATGKAQHGNFLVAIKQEKGESTRTSGEKPHSEEEPVKKRGWPKGKK
RKKILPNGPKAPVTGYVRFLNERREQIRMQHPDLPFPEITKMLGAEWSKLQLSEKQRYLD
EAEREKQQYMKELREYQQSEAYKMCTEKIQEKKIKKEDAGSAAVNTLLNGHLHKAGECSD
TFSTFDVPIFTEEFLDQNKAREAELRRLRKMNTEFEEQNAILQKHTESMNCAKEKLEQEL
AQEERQTLALQQQLQSVRQALTASFASLPIPGTGETPTLSTLDFYMAKLHSAIESNPLQH
EKLVVRIKEILSRIASEHL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcccacagcgccaggcagctgcctgctgccatgctgcatgccacaggcaaagctcag
catgggaacttcctggtggccatcaagcaggagaaaggagagtcgacaaggacaagtggt
gagaagccacacagtgaggaggagccagtgaagaagaggggctggcccaagggcaagaag
aggaagaagatccttccgaatggccccaaagcccctgtgacgggctatgtgcgttttctg
aacgagcggcgtgagcagatccgcatgcagcatcctgacctgcccttcccggagatcacc
aagatgctgggggctgagtggagcaagctgcagctttcggagaagcagcgatatctggat
gaagcggagcgggagaagcagcagtacatgaaggagctacgggaataccagcagtcagag
gcctacaagatgtgcacggagaagatccaggagaagaagatcaagaaagaggatgcaggc
tctgcagccgtgaacactctgctgaacgggcacttgcacaaggctggcgagtgcagtgat
accttctccacctttgatgtgcccatcttcacggaggagttcttggaccaaaacaaagcc
cgggaggctgagctgcggcgcctgcggaagatgaacacggagtttgaggagcagaatgcc
atcttgcagaagcacacggaaagcatgaactgtgccaaggagaagctggagcaggagctg
gcccaggaggagaggcagaccctggccttgcagcagcagctccagtccgtgcggcaagcc
ctcaccgccagcttcgcctccctccccatccccggcactggggagacccccacactgagc
actctggacttctacatggccaagttgcacagcgccattgagagcaatccgctgcagcat
gagaaactggtggtgcgcatcaaggagatcctgtcccggatagccagtgaacacctgtga
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integrated database retrieval system
