Cuculus canorus (common cuckoo): 104062126
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Entry
104062126 CDS
T08597
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104062126 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104062126 (JARID2)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104062126 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
104062126 (JARID2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
104062126
NCBI-ProteinID:
XP_053913362
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All DBs
Position
2:complement(94821792..95052519)
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AA seq
1235 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGDGISGSLKAVN
GLLTNGQSKGLGPGSEQLENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPIKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPSNMVYFGSSQ
DDEDEEEEEEETEDTKTATNNASSSCQSTPRKGKTHKHVPNGQVFNGSSKSSKEKEPAQK
HKSKEATPGKERNSEQKAESRKDQAAANHHPPTNTGSSTKGLTANNHHTLHRSAQDLRKQ
VSKVNGITRMSSPSANAASAKKMREVRPSPSKTVKYTATVTKGTVTYTKAKKELVKETKL
NHHKPSSPVNHTISGKTESSNAKTRKQVLSLGASKSNNTAVNGVKVNGKLNQKTCTKEVG
RQLREGLRNSKRRLEETNHIDKTQSPTKRMKGAVNLAEAASKKTAVEKPLLNGHLKKEVP
EKSLERNRPKRATAGKSTPGKQAHGKTENASCENRSTSQAESLHKPQDSMGKHEKGSSKS
GWGMLGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVT
QIQHIHKLGRRWGPNVQRLACIKKHLKSQGITMDELPLIGGCELDLACFVQLINEMGGMQ
QVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHKKLEKEVLLEKEI
LEKRKGPLEGHSENAYKFHSLPRFEPKNGLINGVVHKNGFRNKLKEVDVPLKTGRRRLFA
QEKETTKEDEEEEEEGVLSNLHKCIYKGRSVSLTTFYRTARNIMNMCFTKEPTVAEVEQE
YWRIVEQKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAV
PGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAAEENKLDDVVHTLLQ
ANGTPGLEMLESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETV
HFATTQWTSMGFKTAKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELR
DTELRQRRQLYEAGLHSSARYGSHDSSSTGMDGKKKPRKWLQLETSERRCQICQHLCYLS
MVVQENENVVFCLECALRHVEKQKSCRGLKMMYRYDEEQIISLVNQICGKVSGKNGSIEN
CISKPTPKRGPRKRATVDVPSSRLSSSSSSKSASS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaagacccaagaggaatataattcaaaagaaatacgatgacagtgatggg
attccctggtcagaggagagggtggtgcggaaggtcctttatttatctcttaaggagttc
aagaacgcacagaagcggcagcacggcgacggcattagtgggagcctcaaggcagtgaac
ggacttctcaccaatggccaatctaaaggattaggaccaggatcagaacagctggagaat
gagaaggacgatgcatcgcaagtgtcctcaactagcaacgatgttagttcttcagatttt
gaagaagggccctcaaggaaaaggccaaggctgcaagcacaaaggaagtttgctcagtcc
cagccaaacagtcccagcacaactccaataaagatagtggagccgttgttaccccctccc
gccactcagatttctgacctctccaaaaggaagcccaagacagaagattttctcactttc
ctctgtcttcgaggttctccagctctgcccagcaacatggtatattttggaagctctcag
gatgatgaggatgaagaggaggaggaggaggagacagaggacacaaaaacagccacaaac
aatgcttcatcgtcatgccagtctacccccaggaaaggaaaaacacataaacatgtacca
aatgggcaagttttcaatgggtccagcaaatcatcgaaggagaaagaacctgctcagaaa
cacaaaagcaaagaggccacaccagggaaggagaggaacagcgaacagaaggctgagagc
cgaaaagaccaggctgctgctaatcaccatcctcctacgaacactggctcctctacgaaa
gggctcaccgctaacaaccaccacactcttcatagatcggctcaggacttaagaaaacag
gtttctaaagtcaacgggatcactcgaatgtcatctccgagtgcaaatgcagccagtgcc
aaaaagatgagagaagtcagaccttcaccgtccaaaactgtgaagtacactgcaacagtg
acaaagggaactgtcacatacaccaaagccaagaaagaactggtcaaggaaaccaaacta
aatcaccacaaacccagttcacctgtcaaccacacaatctcagggaaaacagaaagtagc
aatgcaaaaacccgcaaacaggtgctatcccttggagcatccaagtctaacaataccgct
gttaatggtgtaaaagtcaatggcaagttgaaccaaaagacatgcactaaggaggtgggg
agacagttaagggaggggctgcgcaattcaaagaggaggctggaagagacgaatcacata
gacaaaacacagtcgcccaccaagagaatgaaaggggctgtcaacttggcagaagctgcc
agcaaaaagacagctgtagaaaagcctttgctgaacggacaccttaaaaaggaagtgcca
gaaaagagtttggaaagaaataggccgaaaagagccactgctggaaagagtacgccaggg
aaacaagcacatggcaaaactgaaaatgcctcctgtgaaaatcgttctacctctcaagcg
gagtccttgcacaagccacaagactcaatgggaaagcacgaaaagggcagtagtaagtct
gggtgggggatgctgggggagattcccatccttaggccctccaccaaggaattccatgac
ccactgatatacattgagtcagtccgagctcaggtagagaagtatgggatgtgcagggtg
attcctcctccagactggagacctgagtgcaagctaaatgatgaaatgcggtttgtgaca
cagattcagcacatacacaagctaggcaggcgctggggacccaacgtgcagcggctggcc
tgtatcaagaagcacctcaaatctcagggcattaccatggacgaactcccactcatagga
ggctgcgagctcgacctggcctgcttcgtccagctgatcaacgagatgggggggatgcag
caagtgactgacctcaagaaatggaacaagctggcagacatgctgcgcatccccaaaact
gcacaggacaggctggccaagctgcaagaagcctactgccagtacttgctctcctacgac
tccctctcccccgaggagcacaagaaactggagaaggaggtcttgctggaaaaggaaatc
ttggagaagaggaaaggacctttggagggacattcggagaatgcctacaagttccattcc
ttgccccggtttgagcccaaaaatggactcatcaatggcgtggttcacaaaaatggcttc
cgcaacaaattaaaagaggtcgacgtcccactgaagacgggcaggcggcggctcttcgct
caggaaaaggagaccacgaaggaggacgaagaggaggaggaagagggagttctaagcaac
ttacacaagtgtatatacaagggtaggtctgtttctttaacgaccttctaccgaacagca
agaaatatcatgaacatgtgcttcacaaaggagcctacagtagctgaagtagagcaagaa
tattggcggatagtggaacagaaagattgccatgtagcagtgcattgtggaaaagtagac
accaacacccatgggagtggctttcccgtgggaaaatctgaaccgttttcaaggcatggg
tggaacctcacagtccttcctaataatacaggatccatcctgcgacatcttggtgctgtg
cctggagtgacaattccttggctaaatattggcatggtcttttctacctcatgctggtct
cgagaccaaaatcaccttccatacattgactacttacacactggtgctgattgcatttgg
tattgcattcctgctgcggaggagaacaaacttgatgatgtggtacataccctgctgcaa
gccaatggcactccagggctggaaatgcttgaaagtaatgtaatgatctccccagaaatc
ttgtgcaaggaggggatcagggtgcaccgtactgtacagcagagcgggcagttcgttgtc
tgttttcctggatcctttgtgtctaaagtgtgttgtggctatagtgtttctgaaacagtg
cactttgctaccacccagtggacaagtatgggttttaaaacagccaaggaaatgaagagg
cgacgtatagccaaaccattttcaatggaaaagttgctttatcagattgcaacagcagaa
gcaaagaaggaaaatggaccgactctgagtacgatatcatcacttcttggagagctcagg
gacacggagctgaggcagcggcggcagctttacgaggcaggtctccattcttcagcacgc
tatggtagccacgacagcagcagcacggggatggatggaaagaaaaagcctcgaaagtgg
ttgcagttagaaacgtcagagaggagatgtcagatttgtcagcacttgtgctatctttcc
atggtcgttcaggagaatgaaaacgttgtcttctgcttggagtgtgccctgcggcatgtg
gaaaaacagaagtcttgtcggggactgaaaatgatgtaccgttatgatgaggaacaaata
atcagtctagtcaatcaaatctgtggaaaagtatctggtaagaatggcagcattgagaac
tgtatcagcaagcctacaccaaaaagaggacctcgtaagagagcgacggtggacgtgcca
tcatctaggctttcatcctccagttcatccaaaagtgcttcaagttaa
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