Cuculus canorus (common cuckoo): 104062156
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Entry
104062156 CDS
T08597
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
cuca03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104062156 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104062156 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104062156 (NUP153)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104062156 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
104062156
NCBI-ProteinID:
XP_053913373
LinkDB
All DBs
Position
2
Genome browser
AA seq
1461 aa
AA seq
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MASGGGGSGKVRTRRYHLSAARPPYARSKQQGIISRVTESMKNIVPGWLQRYFNRSEDEC
VDRNESTSQEEIPVNYHHDYANEDTVMIDGRVTPDSARINLEEPCTSRSALNFSDVLTRP
SLHRSHLNCTMLDSTVPHCQPSTSSSLGIGSPGLSLIKEIKDSTSQHDDDNISTTSGFSS
RASDKDITVSKNTSAPLLWSTEVERSHSLSQHPAASSKKPAFNLSAFGSPSPSLGNTSGF
KTSQLGDSPFYPGKTTYGGAAAAARETKARLAPYQPPVRRQMKAKQASVQTYGVTSSTAR
RILQSLEKMSSPLADAKRIPSSVSSPLSSPVDRSMMNTTSYQSKRKQVCKDKLISASLSK
MESQHPPVEKLMTPKSISLAVSRTQYFKPSLTPAADSSKVHQRVDTKHNSMREKSFPAEQ
QIQPSESNLSYPKFSTPASNGLSSGGNGGGKMRRERGVHYVSKPGQEQQEVEEPVLPKVP
LPISTASLPSFSFSFLASSTVSSSPSTVSTAVMNKVQPASSVGSPVFRFSSPIVKSTEAE
VLPPLSQIGFTFSVPVVKSAELSGSSDTPVTSLLTLDTTTVNSTSNKKEEKEEYDGFTKP
AKVLKEGSVLDILKSPGFTSVNTHSSASAQPVTSTVVYTRPAISSFSAGKDTSKQASSFW
QPDTHDPCLQNKTTDGKCVTCQAAKVSTVESTKQIISSSQCVTSKAAVPPAGALGFEDKF
KTAPNMWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTLPVVTDYSVTVTSSSSSTDT
TVTLGFGDQFKKPKGSWDSAVCLVSNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSAPSG
GFLDLDKFKKPEGSWDCEVCLVQNKAEATKCVACESAKPGTKAELKGFGSAAVSSNAAMP
SFKFGVPSSSDSSHTLGSAGNFKFGEQGRFKFGIASESASSSTVTSEFKFLANPGDLKFG
VSSSDSKPEDSKKESKSNSFTFGLSSTTSQAPSTFQFGTPSLGQQEKKEEPVLGSFGFGT
SSTSSVATNENKTGVGDFTFTTVAEKEVASPALAFKKPDEKKDETLPSKAGFSFSTVESA
PAPQFVLGKTEEKKDSVTSAAPLAFGKKADNEELKAQPIFSAGTAEHTKEESTAKPIFNF
NFGKSSEKETEQAKPSFAFGAQTSTSDQGAAKPSFSFLSSNSSSTVVPATSANSSSVFGS
TISSTNPQPVPAPFVFGQPSNTVSSSVFGNSAESAASQSFGFSQENKPATTSSSTGPALA
SFLFGSGASSTNAANPGFTFGATTTSSSTGSSSSFPFGSGPSAPTAGPVFGASQPPAFGQ
SQGSSQPSAPSFGSLSATLFSAGTQPAPTAFGSVSSSTQPSVFGQQATQQPGFGSATPST
GSIFQFGSNTSNFNFPNNPGVFTFGANPTAPAAPAQPSGSSGFSFSQPAAFTVGTNGKNV
FSASGSSVSGRKIKTAVRRRK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcggcggcggcagcgggaaggtccggacccggcggtaccacctgagcgcc
gcgaggccgccctacgccaggagcaagcagcagggaatcatcagcagagtgacagaatcg
atgaaaaacattgtaccaggatggttacagagatatttcaatagaagtgaagatgaatgc
gtagatagaaatgagtctacaagccaagaagagattccagtaaattatcaccatgattat
gcaaatgaagataccgtaatgattgatgggagagtcacgcctgactcagcaagaattaat
ttagaagaaccatgcacgagtagatctgcattgaacttctccgatgtgttaacaagaccc
tctcttcatcggagccatttgaactgtaccatgttggattccacagtgccgcattgtcag
ccctctacatcttcttcacttggcattggcagtcctggactgtctctcataaaagaaata
aaagattctacctctcagcacgatgatgataacatctcaacaaccagtggcttctcctct
agagcatctgataaagatatcacagtttcaaaaaatacttcagcaccgctgctctggtcc
acagaagttgaaagatctcattctctctcccagcatcctgcagctagctctaaaaaaccc
gcattcaatttatctgcttttggatctccctctccttcacttggaaacacttctggcttt
aagacaagccagcttggggattctccattttaccctggaaagaccacttatggtggggca
gctgcagcagcaagggagacaaaagcacgacttgctccttaccagccaccggtaagaaga
caaatgaaagctaaacaagcaagtgtgcagacctatggtgtgacaagttccacagcgcgg
cgcatcttgcagtcattggagaagatgtcaagtcctttggcggatgctaaaaggattcca
tcttctgtttctagtccactgtcttcccctgtggacaggagcatgatgaatactactagc
taccaatccaaacgaaaacaggtatgcaaggataaattgatttctgcttccctttcaaag
atggaatcacagcatccacctgttgagaaactcatgacaccaaagtcaatctctctggca
gtgagtcggacccagtattttaaaccatctctgactccagctgctgattcaagcaaagtc
caccagagggtagatacaaagcacaatagcatgagagagaagagttttcctgcagaacag
caaatacaaccatctgaaagcaatttgagctaccccaaattcagtactcctgcatcgaat
ggactgtcttcaggagggaatggtggtggcaagatgagaagggaaagaggcgtacactat
gtatcaaaacctggacaagaacaacaggaagtggaggaaccagtactaccgaaagtaccc
ttacccatcagtactgcctcgctgccttcattcagctttagttttcttgccagtagtact
gtctcatcatcaccaagcactgtttcaacagcagtgatgaacaaggtacaaccagcaagt
agtgttggtagtcctgtcttcagattttcatctccaattgtgaaatctactgaggcggaa
gtgctacctccgttgtctcagattgggtttacatttagtgttcctgttgtaaaatcagca
gagctttctggatccagtgatacaccagtgacatccttacttactctagataccaccact
gtaaacagcaccagcaataagaaggaagaaaaagaagaatacgatggctttaccaaaccg
gcaaaagtcttaaaggaaggaagtgtgttagacattctaaaaagccctggctttacatct
gtgaatacacactcctctgcatctgcacaacctgttacaagcacagtggtctatacaagg
cctgcaataagtagtttttctgcaggtaaagacacctctaaacaagcctcttcattttgg
cagcctgacacacatgacccatgtctgcagaacaaaaccacggatggcaagtgtgtaaca
tgtcaagctgctaaagtttcaacagtggagagtacgaagcagatcataagctcaagtcaa
tgtgtcacctctaaagcagcagtccctccagcaggggcgttgggctttgaagacaaattt
aaaacggcacccaacatgtgggattgtgatacctgtctggtccagaacaaacctgaagct
acaaaatgtatagcgtgtgagacaccaaaacctggaacaggagtaatgcctgctctgaca
ttgccagtggtcacagactactcggtgacagtgacatcttcctccagcagcaccgacaca
acagtcactctagggtttggagaccaatttaagaagccaaaaggctcttgggactctgcg
gtgtgccttgtgtcaaataaggcagaagacagcaaatgtgtagcttgtcagtctgagaaa
ccagggagttcagtgcctgtgaccagtagcagcgtttctgcattttctgctccttctgga
ggatttttggatttagacaaattcaagaagcctgaaggaagctgggattgtgaggtctgt
ttggtccaaaacaaagcggaagccacaaaatgtgtagcctgtgaaagtgcaaagccaggc
accaaagcagaactcaaaggttttggttctgctgctgtgtcctcaaatgctgcaatgccc
tcgtttaaatttggtgtcccatcatcctctgattcttctcatacgttaggtagcgcagga
aactttaaatttggagaacaagggcgcttcaagttcggcattgcatctgaatcagcatcc
tccagcactgtgacttcagaatttaagtttcttgctaatccaggggacttgaaatttgga
gtttcttcctcagactctaaaccagaagacagtaaaaaagaaagtaaaagtaacagtttt
acctttggactttcatctacaaccagtcaggctccttcaacatttcagtttgggacaccg
agcctgggacagcaggaaaagaaagaggaacctgttttgggaagttttggttttggcacg
agttctacttcttccgtagctaccaatgagaataaaaccggagttggtgacttcactttc
acaactgtggcagaaaaggaggtggcatcacctgctcttgcatttaagaagccagatgag
aaaaaggatgaaactcttccatcaaaagcaggcttctctttcagcaccgtggagtctgca
cctgccccacagtttgttttgggaaagacagaagagaaaaaggactctgtcacttctgct
gctccattagcctttggaaagaaagctgacaatgaagagttaaaggcacaacctatcttt
tcagctgggacggctgagcataccaaagaggagagcacagcaaaacctatattcaatttt
aatttcggtaaatcatcggagaaagaaactgagcaggcaaagccatcttttgcatttggg
gcacaaaccagtacttcagatcaaggagcagcaaagccatccttcagctttttgagctct
aattcctccagcacagtcgtacccgccacttcagccaacagcagcagtgtgtttggcagc
accatctcttctacaaaccctcagccagttcccgctcccttcgtgtttggacaacccagc
aacactgtgagcagctctgtttttggcaattctgcagaatctgcagcatctcagtcattt
ggcttctctcaagaaaacaaaccagcaaccacatcttccagcaccggcccagctcttgct
tcgtttctgtttggttcgggagccagtagtactaatgcagcaaatccaggctttaccttt
ggagccacaaccacatcaagttcaacggggtcgtcctcttcgtttccatttggctctggg
ccttcagcgcctactgctggcccagtgtttggcgccagtcagccaccagcatttggccag
agccaagggtccagccagccaagcgctccaagttttggatcgctgtcagcaacgttgttt
tcagctggcactcagcctgctcctactgccttcggctccgtgagcagcagtactcagccc
tccgtgtttggacagcaagcgacccagcagccgggttttggctctgctacccccagcact
ggttctatattccagtttggaagtaatacatctaatttcaactttcccaataaccctgga
gtatttacttttggtgcaaatcctactgcaccagcagcgccggcacagccttctggctct
tcaggattttcgttcagccagcctgcggcgtttacagtggggactaatgggaaaaatgtt
ttctctgcctctggatcttcagtttctggtcggaagataaagactgcagttagacgtaga
aagtaa
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