Cuculus canorus (common cuckoo): 104062160
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Entry
104062160 CDS
T08597
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104062160 (ATXN1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
104062160
NCBI-ProteinID:
XP_053914349
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Position
2:94202245..94484325
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AA seq
803 aa
AA seq
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MKSNQERSNECLPPKKREIPATSLPSEVKPVLPNENHRADNLAWLPSTAGGQGSLGGRHR
PGGPSSVEAGLQQGLHKSLSAGLDYSPPSAPRSVPASTTLPTVYSPALSQSGTSVSPVQY
THLQHTFQFVGPQYSGSYTGFIPSQLISPTANSATSAVAAATAVATTPSQRSQLEAYSTL
LASMSGLSQQGHKVEPHLVRTPGLIAAGSPPPTQQNQYVHISSSSQSTVRNVSPPTIPVP
LHSHHTVIPHTITLGPSSQVVVQYTDSGGHFVTRDPPKKPESSRLQVMQAKEVLNGEIEK
SRRYGISPSADMGLVKAGNKPVPHHYETRHVVVHSNPAEYGTRDSSGVRASVMVVPNSST
PTADMEVQQATNRETSPSALNDKGSLHLGKPAHRSYALSPQQALGHEGVKAVATLSPHTV
IQTTHSASEQLPVGLPATAFYAGTQPPVIGYLSGQQPAIGYPSSLPQHLVIPGTQSLLIP
VGGADVEPSGVTPAIVTSSPQFAAVPHTFVTTAVPKSENFSAEPLTTQPAYQATMVQAQI
HLPVVQSIASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDS
STVERIEDSHSPGIAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLP
CSKLSVGDVCISLTLKNLKNGSIKKGQPMDSASILLKHSKNDSLAGSKHRYVEQENGINQ
GSAQMLAENGELKFPDKIGLPAAPLLTKTEPSKPPATRKRRWSAPETRKLEKSEEEPPLT
LPKPSFIPQEVKICIEGRSNVGK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcggagcaatgaatgcctgccacctaagaagagagaaatccct
gccaccagcctgccttcagaagtgaagccggtcctgccaaatgaaaaccaccgtgcggat
aacctagcatggctccccagcacagccggtggccagggcagcctggggggccgtcaccgg
cctggggggccgtcctcggtggaggcaggcttgcagcagggtttgcacaagtcactgtct
gcaggactggactattccccgccgagcgctcccaggtccgttccagcctccacgactctt
cccacagtgtactcgcccgccctctcccagtcagggacctccgtttccccggtgcagtac
acgcacctgcagcacaccttccagttcgtcgggccacagtacagtggatcatacaccgga
ttcatcccctcacagctgatttccccaacagccaattctgcgaccagcgccgtggcagcg
gccacagccgttgcaaccactccatcccagcgctcccagctggaggcttattccactttg
ctggccagcatgagcggcttaagccagcagggtcacaaagttgaaccgcacctggtcagg
acacctggactgatcgccgcggggtctcctccacccacccagcagaaccagtacgtccac
atttccagctcttcccagagcactgtcagaaatgtctctcctccaaccatcccagtcccc
ctgcactctcatcatacagtgatcccgcacaccatcacccttggcccttcctcccaagtg
gtggtgcagtacaccgactcgggaggccactttgtcaccagggatccccccaagaagcct
gagagcagccggctgcaggtgatgcaggccaaggaggtactgaatggtgagatagagaag
agccggaggtacggcatttcaccctctgccgacatgggtctagtcaaagcaggcaataaa
ccagttccccatcattacgagaccaggcatgtggtggtccactcgaaccctgccgagtac
ggcacacgggattcctcaggtgtccgagcctccgtcatggtggtccccaacagcagcaca
cccacagcagacatggaggtgcagcaggccaccaaccgtgagacctctccctcagccctc
aatgacaagggaagcttgcacttaggaaagccagcccaccggtcctatgccttgtctcca
cagcaggctctgggccacgagggagtgaaggcagtggccacgctgtcccctcacaccgtc
attcagaccactcacagcgcctctgagcaactccctgtcgggctgccggcgacagccttt
tatgccgggacccagccaccggtgattggctacctgagcggccagcagccagccatcggg
taccccagcagcctgccgcagcacctggtgatccctggcacccagtccctgctgatacca
gtcggtggcgcggatgtcgagccgtcgggagtcacgcctgcgatcgtcacgtcgtctccc
cagtttgcagcagtgcctcacacgttcgtcaccaccgctgtccccaaaagcgagaacttc
agtgcggagcccctcaccacccagccggcctaccaagccaccatggtgcaggcacagatc
cacctgcctgtggtgcagtccatcgcttctcccgccgccgcgcctcccacgctgccccct
tacttcatgaaggggtcgattattcagctggccaatggggagcttaagaaagtagaggac
ttgaaaacagaagacttcatacagagcgcggaaataagcaatgacctgaaaatagactcc
agcactgtggagaggattgaagacagccatagcccaggcattgctgtgatacagtttgca
gttggggagcatcgagcacaggtcagcgtggaagtcttggtagaataccctttttttgta
tttggacaaggctggtcatcctgctgccccgagagaaccagccagctctttgatttgcca
tgctccaaactctcggtgggggacgtctgcatatcgctaacgctcaagaacctgaagaac
ggctctattaaaaagggccagcccatggactcagctagtatcttgctgaagcattcaaag
aatgacagtctagctggaagtaaacacaggtatgtggagcaagaaaatgggattaatcag
ggaagtgctcagatgttagctgagaacggtgaactgaagtttccggacaaaataggattg
cctgcagcacctttgctcaccaaaacagaacccagcaagcccccggcaacaaggaagagg
aggtggtcagcccctgaaacacgaaaactagagaaatcagaagaggaaccacctttgact
cttcccaagccttcttttattcctcaggaggttaagatttgcattgaaggtcgatccaac
gtaggaaagtaa
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