Cuculus canorus (common cuckoo): 104062167
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Entry
104062167 CDS
T08597
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104062167 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104062167 (NHLRC1)
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104062167 (NHLRC1)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104062167 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
FYVE
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
104062167
NCBI-ProteinID:
XP_053914311
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All DBs
Position
2:complement(95797724..95801151)
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AA seq
382 aa
AA seq
DB search
MASCPDSEAELSLLECRVCFEPFGPVLQRRPRNLPCGHVLCRGCLVALGGPDGRRLECPF
CRRPCGSAETSDCLPLLQLLEVLETAGGSIPASLSRGVPGASLGLRLSLGGWGSLVNPTG
VAACPKTGRLAVAHDGKKRIHIFGPSGTCLQRFGERGDAGNDIKYALDVTVTWDGHVVVT
DGGDRAVKAFDFDGRGVLAAREGFRLPWGLDATPEGEVILTDSEAGALYRLTADFTNREF
KKCQMIRSQLINPRGVAVSPVSGAIVVIEHLKAQGPNGGSTRVKIFSAEMDLIGQMDSFG
LNLVFPSKIYTTAVAFDKEGRIIVTDVCSQAVICLGKPEEFPIFNSLISHGLSYPVGLTY
MVNNFLVVLDSGDHSIKIYSST
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttgtcccgactccgaggcggagctgagcctgctggagtgccgggtgtgcttc
gagccgttcggccccgtcctgcagcggcggccgcggaacctgccgtgcgggcatgtgctg
tgccggggctgcctggtggccttgggtggccccgatggccggaggctcgaatgccctttc
tgccggcggccctgcggctccgctgagaccagcgactgcctcccgctcctccagctgctg
gaggtgctggagaccgcgggtggcagcatccctgcatccctgagccgaggggtccccggt
gcttccctgggtctccggttgtcgctgggaggatgggggtccctggtgaaccccaccggg
gtggccgcttgcccgaagacggggcgcctggcagtggcacacgacggcaagaagaggatc
cacatctttgggccgagtggaacctgcctgcagcgctttggggagcgaggggacgcaggc
aatgacatcaagtacgctctcgatgtcaccgtcacctgggacgggcacgtggtggtcacc
gatggcggggaccgcgctgtgaaggcgtttgattttgatggaaggggagtcctggctgcc
cgggaaggtttccgcttgccctggggcttggatgccacccctgagggtgaagtcatcctg
acagactcggaggcgggtgcgctgtaccgcttgacagccgacttcaccaacagggaattc
aagaagtgccagatgatccggtctcagctcatcaacccgagaggggttgctgtctctccg
gtctcaggggctattgtggtgatagagcacctgaaagctcaaggacccaacggtggcagc
acccgagtgaagattttcagtgcagagatggatctcattggacagatggatagcttcggt
ttgaatctcgttttcccctccaaaatatatactacagctgtggcctttgacaaagaggga
cgtattatcgtaacagatgtctgtagccaggctgtaatatgtttagggaaacctgaggag
tttcccatctttaactctctaataagccatgggctttcttatcctgtaggactgacttac
atggtaaataatttccttgttgttttagacagcggtgatcattcaataaaaatatatagc
tctacctga
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