Cuculus canorus (common cuckoo): 104062172
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Entry
104062172 CDS
T08597
Symbol
SLC6A5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104062172 (SLC6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cuca02000
]
104062172 (SLC6A5)
Transporters [BR:
cuca02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104062172 (SLC6A5)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104062172
NCBI-ProteinID:
XP_053923047
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Position
5:complement(13219080..13252713)
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AA seq
862 aa
AA seq
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MGSLSSSTCKPSRSLALRAAACSGTKLLQTLDGNSDISTGLLEALQNLKLTLAECMRRKN
VSDAETAGKDYTSQRDMSKQVVNNPETVAPGPNEGSGVVRISPENEPQNALSQAPATMAR
LPRSLSNDNRSLLSEEAKPNDFERTKIGICKLSSTLVQANSTLRRESVETFPCKHTPEAG
TTGQPAIPHCKIPPLQSTDGDANLNLGKSTLEQNNAKGAWVTLSQSTVVLGTDGNTSVLP
GRVEGEDDVGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFKNGGGAFLIPYLM
MLALAGIPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIILCYTL
FYLFASFVPVLPWASCNNPWNTPDCKDKNKLLLDSCIISDHPKIQIKNSTFCMSAYPNLT
MVNFTSEGNKTFVSGSEEYFKYFVLKISAGIEYPGEIRWPLALSLFLAWVIVYASLAKGI
KSSGKVVYFTATFPYVVLIILLIRGVTLPGAGAGIWYFITPKWEKLIDAMVWKDAATQIF
FSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANELKVNI
EAVADQGPGIAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFP
KYLRTHKGLFTLGCCIAFFIMGFPMITQGGMYMLQLVDTYAASYSLVIIAIFELVGVSYI
YGLQRFCEDIEMMIGFQPSKFWRVCWAFVTPTILTFILCFSFYQWEPMTYGAYHYPGWSM
VLGWLMLACSVIWIPVMFVIKMHLAPGKFIERLKLVCSPQPDWGPFLAKHRGERYMNMID
PLGTSSLGLKLPVKDIELGSQC
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcctcagcagctccacctgcaagccgagccgcagcctggctctgcgggcagct
gcctgcagtggaacaaagcttcttcagacccttgatgggaactcggacatcagcaccggg
ctgctagaggctttgcagaatttgaagctgacgctagcagagtgtatgcggaggaagaac
gtctctgacgctgaaacagctgggaaggattacaccagtcaaagggatatgagcaagcag
gttgtgaacaatcctgaaactgttgctcctggacctaatgaaggttccggagttgtcaga
atcagccctgaaaatgagccgcagaatgccctctcgcaagcccctgccacgatggccagg
cttcctcgatcactctctaacgacaacagatcacttctttctgaagaagctaaaccaaat
gattttgagaggaccaaaatcgggatctgcaagctcagcagtaccctggtgcaagccaat
tccaccctccggagggaatctgtggaaacctttccgtgcaagcacacccctgaggcaggg
accaccgggcaacctgctattcctcactgcaaaattccccctttgcaaagcacagacgga
gatgctaatctgaaccttggtaagagcacactggagcaaaacaacgccaaaggcgcctgg
gtgaccttgagccagagtaccgtggtactgggcacagatggcaatacttctgttcttcct
ggcagagtggagggggaagacgatgtaggggatgaaaataaagcccgagggaactggtct
agcaagctggatttcatcctctccatggtgggttatgcagtggggctgggcaatgtctgg
aggttcccgtacctggcctttaagaatgggggaggtgcgtttctcatcccctatttgatg
atgttggctctagctgggatccccattttcttcctggaagtctccctggggcagtttgct
agtcaggggcccgtgtctgtctggaaagccatccctgccttgcaaggctgcggcatcgca
atgctgatcatctcggttctaatagccatatattacaatattatcctgtgctacacactt
ttctacctttttgcgtcctttgtacccgtgctaccttgggcttcctgtaacaacccgtgg
aacacgccagactgtaaagataaaaacaaacttttgttagattcctgcattattagcgac
cacccaaaaatacaaatcaagaactctactttctgtatgagtgcctatccaaacttgacc
atggttaacttcaccagtgaaggaaacaaaacgtttgtcagtggaagcgaagaatacttc
aagtactttgtactgaagatttcagcagggattgaatatcctggtgagattagatggccc
ttggcactgtctcttttcctagcttgggtgattgtgtatgcctcccttgctaaaggaatc
aagtcatcaggaaaagtggtgtacttcacagctacgttcccttacgtagttcttatcatc
cttcttatacgaggagtaactctacctggagctggagctggaatctggtacttcatcaca
ccaaagtgggagaagctaattgatgctatggtttggaaggatgctgccactcagattttc
ttctccttatctgcagcgtggggaggtctaattactctatcttcttacaacaaattccat
aataattgctacagggacacattgatagtcacgtgtaccaacagtgccacaagtatattt
gcaggctttgtcatcttctcagttattggcttcatggcaaatgagctcaaagtgaatatt
gaagctgtggcagaccaaggtcctggaattgcttttgtggtttacccagaagccttaact
aggcttcccctctctccattctgggctataatattctttttgatgcttctgacactggga
ttggacactatgtttgccactattgagactatagtgacctccgtttcagatgagttccca
aaatacttacgtactcacaaaggactgttcactcttgggtgctgcattgcctttttcatc
atgggatttcctatgatcactcagggtggaatgtatatgttacagcttgtggacacttat
gcagcttcttattctcttgtcatcattgccatctttgagctcgttggagtttcctatata
tatggtttgcaaagattttgcgaagatatcgaaatgatgatcggattccagccaagtaaa
ttctggagagtctgttgggcatttgtgaccccaactattttaacatttattctttgcttc
agtttttaccagtgggaaccaatgacttatggagcttaccactacccaggctggtccatg
gtgcttggatggctgatgctggcctgctcggttatctggatcccagttatgtttgtgata
aaaatgcatctagctccaggaaaatttattgagcgactcaagttggtgtgttctccacag
cctgactggggtccgtttttggccaagcaccgtggtgaacgttacatgaacatgattgat
ccactgggaacctcttccctgggacttaaactgccagtgaaggatatagaactggggagt
caatgctaa
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