Cuculus canorus (common cuckoo): 104062275
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Entry
104062275 CDS
T08597
Symbol
ESR1
Name
(RefSeq) LOW QUALITY PROTEIN: estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
104062275 (ESR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104062275 (ESR1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cuca03310
]
104062275 (ESR1)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
104062275 (ESR1)
Nuclear receptors [BR:
cuca03310
]
3. Estrogen like
3A. Estrogen receptor
104062275 (ESR1)
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Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
ESR1_C
Thyroglob_assoc
Motif
Other DBs
NCBI-GeneID:
104062275
NCBI-ProteinID:
XP_053918206
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Position
3:complement(50753145..50926273)
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AA seq
707 aa
AA seq
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MATACWDQCGLPAADLAVDSKSRYVPWSLALALTMTLHTKTSGVTLLHQIQGTELETLSR
PQLKIPLERSLSDMYVESNKTGVFNYPEGATYDFGTTAPVYSSTTLTYAPTSESFGSSSL
AGFHSLNNVPPSPVVFLQTAPQLSPFIHHHSQQVPYYLENEQGNFGMRETAPPAFYRTPM
NKQSLVSVKCPTIVMKSAIENHMWKIDNTFRADLNKKEDMRLHMSEGEHIQNIEPSSDNR
RHSIRERMSNTNEKGSLSMESTKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHN
DYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMMKQKRQREEQDSR
NGEASTELRAPTLWTSPLVVKHNKKNSPALSLTAEQMVSALLEAEPPIVYSEYDPNRPFN
EASMMTLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEH
PGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATAARFRMMNLQGEEFVCLKSIILLNSGV
YTFLSSTLKSLEERDYIHRVLDKITDTLIHLMAKSGLSLQQQHRRLAQLLLILSHIRHMS
NKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLHAPAARSAAPMEQENRSQLTTASASSHSL
QSFYINSKEEDXHAEYNISKSQEIQWYEKPSSILSNSHFILFTVPPK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcctgctgggatcaatgtggactgccagctgccgatctcgctgttgacagt
aaaagcagatatgttccttggtcactggcattagcactgaccatgacccttcacaccaaa
acctctggagttaccctgctgcaccagattcaaggcactgaactggagacactgagcaga
cctcagctgaagattcccctggaaagatcgctcagcgacatgtatgtggagagcaacaag
acaggagtttttaactacccagaaggggccacgtatgatttcggtactacagctccagtg
tacagctctactactctcacttatgcccctacttctgaatcttttgggtccagcagtctg
gcaggatttcattcactgaacaatgtcccaccaagcccagtggtgttcttgcaaacggcg
cctcagctatcacccttcatccatcatcacagccaacaggtaccctactaccttgaaaat
gaacagggaaactttggcatgagggaaactgctcctccagccttctacaggacccctatg
aataaacagtcattggtgtctgtgaagtgcccaactattgtaatgaagagtgctattgaa
aatcacatgtggaaaatcgacaacactttcagagcagacttgaataagaaagaagacatg
aggctacatatgagcgagggtgaacacatccaaaatattgagccaagctctgataacagg
cgccacagcatccgagagaggatgtccaatactaatgagaaagggagcttgtccatggag
tccaccaaggagacgcggtattgtgctgtctgcaatgactatgcttcaggctaccattat
ggggtctggtcttgtgagggctgcaaagcttttttcaaaaggagtattcaagggcacaat
gactacatgtgtcctgctactaaccagtgcaccatagacaagaacagaagaaaaagttgc
caggcttgccgactcagaaaatgctatgaagtgggaatgatgaaaggtggaatccggaaa
gatcgcagaggtgggcgaatgatgaaacaaaaacgtcaaagagaggagcaagattccaga
aacggggaggcttctacagagctgcgagctcccaccctctggacaagtccactggtagtg
aaacataacaagaagaacagtccggccctgtccctgacagcagaacagatggtcagtgcc
ttgctggaagctgagccacccatagtttattctgaatatgacccaaacaggccattcaat
gaagcctctatgatgactctgttgaccaaccttgcagacagagaattagtgcacatgatc
aactgggcaaagagagttccaggatttgtggatttaacactccatgatcaggtccatcta
ctggaatgtgcctggttagagatactgatgattggcttagtctggcgctccatggaacac
ccaggaaagcttttatttgcacctaacctgttactggacaggaatcaaggaaaatgtgta
gagggcatggtggaaatctttgacatgctgctagctactgctgctcggtttcgcatgatg
aaccttcaaggggaggaatttgtgtgccttaagtccatcatcctgctcaattctggtgtg
tacacttttctttccagcaccttgaaatctctggaagagagagactatattcatcgtgtt
ctggacaaaataacagacactttgatacatttaatggctaagtcaggtctttctctgcag
cagcaacacagacgactggctcagctcctcctcatcctctctcacatcagacacatgagc
aacaaaggaatggagcacctgtacaatatgaagtgtaaaaatgtagttccactttacgat
cttttgctggagatgctggatgctcaccgactgcatgcaccagcagccaggagtgctgca
ccgatggaacaggagaaccggagccagctgacaactgcatcagcttcatctcattccttg
cagtctttttatataaacagcaaagaggaggacnaacatgcagaatacaatataagcaaa
agtcaggagatacaatggtatgagaaacccagcagcatactatctaactcacacttcatt
ttgtttacagtgccacctaagtaa
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