Cuculus canorus (common cuckoo): 104062345
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Entry
104062345 CDS
T08597
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104062345 (BRF1)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
104062345 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Motif
Other DBs
NCBI-GeneID:
104062345
NCBI-ProteinID:
XP_053924855
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Position
5:complement(7234856..7413468)
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AA seq
681 aa
AA seq
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MPGGRVCAACGCSEIEVDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDGAGKTPTLGGGFHANLGKESRAQTLQNGKRQIHHLGNQLQLNQHCLDTAFNFFKMAVT
KRLTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMRIDLEEECDPPSFTAGQK
KLKIQQLEKALSKKLEDFEGEISSYQDEIEIELENSRPKAKGVFANYTKDDSIEDNASSM
FGEEETEDEELEAAANHLNKDFYNELHEKDRINKTEDEKCQNGNKGLVRPPALESLLGPL
PTAASLGITESIKECIYTKDREPDENTEDGELDLSGIDDSEIDRYILNEAEAQIKAELWM
KENADYLKEQKEKEARIAKEKELGIYKEHKPKKSAKKREPIQASTAGEAIEKMLEQKKIS
SKINYNVLRDLNSKGSNTPKKEDDSTDESPNTKKLSRRKSIASRNIANPVNSVGKRLRPL
ISTQLAKKAATEEVTFPDAQAEAPDSEKPAGVLVESGPVAYNPDEEVEEEEIEDDDDHCM
SALQLMGGNDYGCDMDDDDGY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgggcgggtttgcgcggcttgcggctgctccgagatcgaggtggacgcggcg
cgcggggacgcggtatgcacgggctgcgggtcggtgctggaggacaacatcatcgtctcc
gaggtgcagttcgtggagaacagcggcggcggctcctccgccgtggggcagttcgtgtcg
ctggacggtgcaggcaaaacaccgactttaggaggaggattccatgccaatctgggaaag
gagtcacgagcacaaactctgcagaatgggaaacgtcagattcaccacttgggaaaccag
cttcaactcaatcaacattgtctggatactgcctttaattttttcaagatggctgtaacc
aagcgtctaaccagggggagaaagatgacccacgtaattgctgcgtgtctctacctggtg
tgtaggacagaaggaactcctcacatgttacttgacctcagtgaccttcttcaggtgaat
gtctatgtgctgggaaaaactttccttctgttggccagagaactctgcataaatgctcca
gccatagatccgtgtttatatattcctcgttttgcccacatgcttgagttcggggataag
aaccatgaggtgtccatgacggctctccggctgctgcagaggatgaagcgggactggatg
cacactggccgccggccctccgggctctgcggggcggcactgctagtggcagcaagaatg
catgatttccgacggactgttaaagaggtcatcagggtggtcaaggtttgtgagtctaca
ttaaggaaaaggttgacagagtttgaagatacacccacaagtcagctaaccatagatgag
tttatgaggattgacttggaagaagaatgtgatcctccttcgtttactgctggtcaaaaa
aaattgaagatacagcagcttgagaaggcattatcaaaaaagctggaggattttgaaggt
gaaatatcgagctatcaagatgaaatagagattgaattggaaaacagtagaccaaaagca
aaaggcgtatttgcgaattacactaaagatgattctatagaagataatgcctctagtatg
tttggagaggaggagacagaagatgaggaactagaagcagctgctaatcacttaaacaag
gacttttataatgaacttcatgagaaggatagaataaacaaaactgaagatgagaaatgc
caaaatggaaataaaggtcttgtaagaccacctgcactggaatccttgctgggcccactc
cccaccgcagctagtcttggcataacagaatccataaaagagtgcatatacactaaggac
cgagagcctgatgagaatacagaagatggtgaattagatctgagtgggatcgacgacagt
gaaatagatcggtatatacttaacgaagcagaagcacagataaaagcagagctgtggatg
aaagaaaatgcagattatttgaaggaacaaaaagaaaaggaagcaagaatagcaaaagag
aaagaacttgggatttataaggaacacaagccaaagaaatctgcaaagaagcgggagcca
attcaagccagcacagcaggagaggcaattgaaaagatgttagaacagaagaaaatctca
agtaaaattaattataatgtgctaagggacctgaacagcaaaggaagtaacacaccaaag
aaagaggatgacagcactgatgagagccccaacaccaagaagctgtcaagaagaaaatct
attgccagtaggaatatagccaaccctgtaaacagtgtgggaaaaagattaagacccttg
atttcaacacaacttgctaaaaaggctgccaccgaagaggtgacctttccagatgcacaa
gcagaagcccctgactcagaaaagccagcaggggtgctagtggagagtggcccagtagct
tacaaccctgacgaagaggtggaagaggaagaaatagaagatgatgatgatcactgcatg
agcgccttacagttaatgggagggaatgattatggctgtgatatggatgatgatgatggc
tattaa
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