Cuculus canorus (common cuckoo): 104062358
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Entry
104062358 CDS
T08597
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03022
Basal transcription factors
cuca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104062358 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
104062358 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104062358 (MNAT1)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104062358 (MNAT1)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104062358 (MNAT1)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104062358 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
DUF3292
TRAF3_RING
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
104062358
NCBI-ProteinID:
XP_053923062
LinkDB
All DBs
Position
5:complement(9047845..9178756)
Genome browser
AA seq
312 aa
AA seq
DB search
MDAMDDLGCPRCKTTKYRNPSLKLMINVCGHTLCENCVELLFVRGAGNCLECDTPLRKCN
FRIQLFEDPAVDKEVEIRKKVLKIYNKREDDFDSLNDYNDYLEEIEEIVFNLTNNVDVEN
TKKKMELYQKENKEVIQKNKMKLMREQEELEAALEVERQENEQKRLLIQKEEQLQQMMKR
KNKQALLDELESSSLPASLLLAQHKDRSTQLEMQVEKPKPVKPVTFSTGIKMGQPISLAP
VQKLEETLYEYQPLQVETHGPQVPEPEMLGRLGYLSHVRAASPQDVAGGYTSSLACYRAL
QDAFSGLLWHPR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatggatgacctgggctgtccgcggtgcaagaccaccaagtaccgcaacccc
tccttgaagctgatgatcaatgtctgcgggcacacgctatgcgagaactgtgtggaactg
ctgtttgtgagaggggctgggaattgcctggagtgcgatacccccctgcggaaatgtaac
ttcaggatccagctcttcgaggatcctgctgtcgacaaggaagtggaaattcggaagaag
gtcctgaaaatatacaataaaagagaagatgactttgacagtctaaacgattacaatgat
tacctggaagaaatagaagaaattgtatttaacttgaccaacaatgtggatgtggagaac
accaaaaagaaaatggaactgtaccagaaggagaacaaagaagtaattcagaaaaataag
atgaaactgatgcgggaacaggaagagctggaggcagctttagaggtagagcgacaggaa
aatgaacaaaagcgactacttatacagaaagaagagcaactacaacagatgatgaaaagg
aagaataagcaggcactcttggatgagttggagagctccagtcttcctgcttcactgctt
ttagctcagcataaggacagatctactcagctagaaatgcaagtggaaaaacccaaacct
gtcaaaccagtcacgttttctactggcatcaaaatgggtcagcctatttcgctagctccc
gttcaaaagctggaggaaaccttgtatgaatatcagcctctgcaagtggagacacatgga
ccgcaagttccagagcccgaaatgttgggaaggttggggtatctcagccacgtacgagct
gcctctccgcaggacgtcgctgggggctacacttcttctctcgcgtgctaccgagcctta
caggatgctttcagtggtctcctctggcacccccgttag
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