Cuculus canorus (common cuckoo): 104062405
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Entry
104062405 CDS
T08597
Symbol
PUS7L
Name
(RefSeq) pseudouridylate synthase PUS7L isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104062405 (PUS7L)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
104062405 (PUS7L)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104062405 (PUS7L)
Prokaryotic type
104062405 (PUS7L)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
104062405
NCBI-ProteinID:
XP_009562752
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All DBs
Position
1:176753974..176766378
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AA seq
683 aa
AA seq
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MLRSFSYLTDHTGFCGTIKNSPSDFVVTEIEVTEHSLRDTQAKSLQKPMEVLLGQSSPGL
CAQSCDGGGTPVPADQGLRWAGDSCPASPCQNQHESKAELKPGLEDASVLDSLLGKAVSE
LLNKYACDLKDVWKSKSDANAGTREFSLGPILDKKNRADLHSAIRQKFPFLVTVTKDNEM
IVKGNADYRELCQFVTEKETSDFFKFLDAKLENSTFSFEPDGDKEHRKVVHHFINRKFGK
LLETKSFTVTDVNDQQNMSIMVRFREKGWSRKRPAGGFQEKQDLYTAFTLQKENLETLEA
ISFLAAELGVLPSDFSYTGIKDKKAITYQPMVVKKVTPERLKEIGNKMEKKGIRIHNIHS
ACQHLRLGQLKGNHFDVVVRDLKHHSHDSSADLKKRISEAMENVETKGFVNYYGPQRFGQ
GQNVQTDQIGLALLNEEMVKAVKLFFTPEDTDDPVNNAKRYFLQTEDAKGALVMLPEFKV
RERMLLRALNRYGVNHEGCTKGWLSIPHSMRIFYVHAYCSKIWNEAASYRLSIYGSKVVE
GDLVFSEETDETISLNDKVHVVTAAEESAKKYSINQVVLPMVGHSIKYPGNKVGQWYHER
LSKDELQTCKFRVSPLQLNIPGCYRPILKNVQNLSYFLEGSEKGIEIEDNYLNESKVSLH
ISFDLDPSCYATVCLREIMKCDF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctccttcagttacctcactgatcacaccggcttctgcggcacaatcaaaaac
tcaccgagtgacttcgtagtgacagaaattgaagtgactgagcattcacttagggatacc
caggccaaatcccttcagaaacccatggaagtgctgctaggacagagcagcccaggcctg
tgtgcccaaagctgtgatggtggtgggacacccgtgcctgcagatcaggggctacgttgg
gcaggagacagctgccctgcatctccatgccagaaccagcatgagagcaaagctgaactg
aaacctggcctcgaggatgccagtgtattggattccttactaggcaaagccgtaagtgag
ctgcttaataaatatgcttgtgatctgaaggatgtgtggaagtcgaaaagtgatgccaat
gctggcactagggagttctcacttggacctatactggacaagaaaaatcgagctgattta
cacagtgccattaggcagaaattcccctttctagtcactgttacaaaagacaatgaaatg
attgtaaaaggaaatgctgattacagagaactttgtcagttcgtgactgaaaaggaaaca
agtgatttctttaaatttttagatgcaaagctagaaaattctacattttcttttgagcct
gatggagacaaggagcacagaaaagtagttcaccactttatcaacagaaaatttgggaaa
cttctagaaacaaagtcttttactgtgacagatgtcaatgatcagcaaaatatgtcaata
atggtacgatttcgagaaaaaggttggtccagaaaaaggcctgctggtggtttccaggaa
aaacaagatctttatacagctttcacccttcagaaggaaaatctagaaacactagaagca
atcagctttttggccgctgaacttggtgttcttccttcagacttcagttacactggcatc
aaagataagaaggctattacttatcagcctatggttgtgaagaaagtaactcctgagagg
ttgaaagaaattggaaacaaaatggaaaaaaagggcataagaatacacaatatacattca
gcatgccagcatcttagacttggtcagctcaagggcaatcactttgatgtagttgtgaga
gatctcaaacaccacagtcatgactcttctgcagatttgaaaaagagaatatctgaagca
atggaaaatgttgagacaaaaggttttgtaaattactacggacctcaacgatttggacaa
ggacaaaatgttcagacagatcaaataggattggctttactgaatgaagagatggtgaaa
gctgtgaaattattcttcacacctgaggatactgatgaccctgtaaacaacgcaaaaaga
tactttcttcaaactgaagatgcaaagggtgcacttgtgatgctgccagaatttaaagtg
agagagaggatgttgctacgagccttaaatcgctatggtgtaaatcatgaaggttgtacc
aaaggatggctcagtattccccattccatgcgcatattctatgtccatgcttattgcagt
aaaatttggaatgaagcagcatcatatagactgagcatctatggttcgaaagttgttgag
ggtgatcttgtcttctcagaagaaactgatgaaaccatttccctaaatgacaaggttcat
gtagtcactgccgctgaagaatcagctaagaaatactctataaaccaagtggttcttccg
atggtgggacatagtatcaagtatcctggtaataaagttgggcaatggtaccatgaaagg
ctttctaaggatgagctgcagacgtgcaaattcagagtgtctccattacagctgaatata
cctggatgctatagaccaattttgaaaaatgttcagaatctgtcatattttttggagggt
agtgaaaaaggaattgaaattgaagacaactatttgaatgaatcaaaagtctcccttcat
atatcatttgaccttgacccttcatgttatgcaacagtctgtttgagagaaataatgaaa
tgtgacttttaa
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