Cuculus canorus (common cuckoo): 104062444
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Entry
104062444 CDS
T08597
Symbol
PRDM13
Name
(RefSeq) PR domain zinc finger protein 13 isoform X1
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104062444 (PRDM13)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104062444 (PRDM13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-BED
zf-C2H2_15
Zf-C2H2_ZNF451
zf-C2H2_7th_ZNF462
PyrI_C
DUF7128
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
104062444
NCBI-ProteinID:
XP_053917652
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Position
3:26910712..26918153
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AA seq
613 aa
AA seq
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MQTSRAPAISVSAESCIPAGLRLGPVPGIFKLGKYLSDRREPGPKKKVRMVRGELVDEAG
SSALEWIGLIRAARNSQEQTLEAVADLPGGQKFPFFPSQIFYRALRDVQPGEELTVWYSN
PLAQWFDIPVTATPTHDEKGEERYICWYCWRTFKYPNSLKAHVHFHCALSHGRPFLPHDH
GRPAAAFALPAKEPPAPRGHPGPGPRDAVKREAATASPPLAKAGPPRRSAGKEEQERALD
MSVGAARGPAALLGPAGGGALCPGARSAFRPAGPLRDEARGALGFSKLLGGLKAGRAAAE
APPKCGALPGEAVPPAAGLACGAGLRAFPLLSPLEETSAFRQVERALPAASLPPARYPPL
PGALERFALPPFEGLKAYAGECGLPVMPLTVYNGELLYGAAPYYPLKLHLGGLLKYPESV
SYFGGPAAGLHAAELGSLAGIDREIAMHTQQLSELAAEKGRGRLEALPAAGAAGGKPKTG
HLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRC
EYCGKVLVRRRDLERHVKSRHPGQSLGKAAEDKSDSVYAHPDQEQKTDNESDVDVCFTDD
QSDAESGSRTREQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagcagggctccggccatcagcgtcagcgccgagagctgcatcccggccggg
ctgcggctgggtcccgtgccgggcatcttcaaactgggcaagtacctgtcagaccgcaga
gagccaggacccaaaaaaaaggtgcggatggtgagaggagaattagtggatgaagccggg
agctcagctctggagtggatagggttaatccgggctgcccgaaactcccaagagcagaca
ctggaggctgttgcggatctgccaggaggacagaagtttcctttcttcccctcccagatt
ttctaccgggcgctacgagatgtccagccgggagaggagctcaccgtctggtactccaac
cccctggcgcagtggtttgacatccccgtcacggccaccccgacgcacgacgagaaaggg
gaggagcggtacatctgctggtactgctggaggaccttcaagtaccccaacagcctcaag
gcccacgtccacttccactgcgcgctgagccacgggcggcccttcctgccccacgatcac
ggccgccccgccgccgccttcgcgctgccggccaaggagccgccggcgccgcgcggccac
cccggccccggcccgcgggacgccgtcaaacgcgaggccgccaccgcctcgccgccgctc
gctaaagcggggccgccccggcgctcggcgggcaaggaggagcaggagcgcgccctggac
atgagcgtgggggcggcccgcgggccggcggcgctgctggggccggcggggggcggcgcg
ctctgccccggggcgcgctcggcgttccgccccgcggggccgctgcgggacgaggcgcgg
ggcgcgctcggcttctccaagctgctgggggggctgaaggcgggacgcgccgccgccgag
gcaccgcccaaatgcggggcgctgcccggcgaggccgtgcccccggcggcggggctggcg
tgcggcgcggggctgcgagccttcccgctgctctcgcccctggaggagacgtcggctttc
cggcaggtggagcgggctctgcccgccgcttcgctgccgcccgcccgctacccgccgctg
cccggcgcgctggaacgcttcgcgctgccgcccttcgaagggctgaaggcgtacgccggg
gagtgcgggctgcccgtcatgccgctcaccgtctacaacggggagctgctgtacggcgcc
gcgccctactacccgctgaagctgcacctcggcgggctcctcaagtaccccgagtccgtg
tcgtacttcggggggccggcggcggggctgcacgccgccgagctgggctcgctggccggc
atcgaccgggagatcgccatgcacacgcagcagctgtcggagctggcggccgagaagggg
cgcgggcggctggaggcgctgccggcggcgggggcggcggggggcaagcccaagaccggg
cacctgtgcctgtactgcgggaagctgtactcccgcaagtacgggctgaagatccacatg
cggactcacaccggctacaagccgctcaagtgcaaggtgtgcctgcggcccttcggggac
cccagcaacctcaacaagcacatccgcctgcacgccgagggcaacacgccgtaccgctgc
gagtactgcgggaaggtgctggtgcggcgccgcgacctggagcggcacgtcaagtcccgg
cacccggggcagagcctcggcaaggcggccgaggacaagagtgactctgtctacgctcac
ccggaccaggagcaaaagactgacaacgagagcgacgtggacgtctgcttcaccgacgac
cagagcgacgcggagagcggcagccggacccgcgagcagtga
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