Cuculus canorus (common cuckoo): 104062749
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Entry
104062749 CDS
T08597
Symbol
REV3L
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104062749 (REV3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104062749 (REV3L)
Enzymes [BR:
cuca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104062749 (REV3L)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
104062749 (REV3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
104062749
NCBI-ProteinID:
XP_053917880
LinkDB
All DBs
Position
3:complement(32654028..32774724)
Genome browser
AA seq
3172 aa
AA seq
DB search
MFSVRIVTADYYMGSPLPGLDPCQSHFREAPTRRVPVVRVFGATPAGQKTCLHLHGIFPY
LYVPYDGFGQHPEHYLRQVAFSIDRALNVALGNPSSSVQHVFKVSLVSGTPFYGYHEKER
QFMKIYLYNPAMVKRVCELLQGGAIMNKSYQPHEAHIPYLLQLFIDYNLYGMNLINLAAV
KFRKARRKSAASGVSKRHRTHLPENSNSTSFIEWEEDEIPSSLMLKGVEPQSTCELEVDA
VAADILNQLDIEAQIGRNPGLQAIWEDEKQRRRQKCESSQIKPPESQDRGFVPATESEKF
FQKRLKEILKQNDFSVTLSGSVDYSNGSEEFSAELTLHSEVLSPEAFQCTPANMVEVHKD
KKMNKESNRMHTDKEEEALINEEAILNIVENSQSFQPLSQRLSQTTVFMDSSADEAMIDL
LAGLENDGYQMEHHKTHSHHRSLGSCRNAQNSDDEENELQCEKEEMELSLLMSQRWDSSI
EEPGPKRRSAGKSMHQSSAEEDSSSEEEMEWSGNNMLLTNLSIPQLDGTADENGDNPLNN
ESSRTHSSVIATSKMSVKTSIFHKGAATLEPPSSAKITFQCKHTSALSNHVLNNEDLVED
LSQPNTENRPELSVHSLAKESTYSAKYPAPFSNSIHLENSHKESNKKDTLPISSCENNIF
EYEDDITSVSRQIPSRKYTSIRKTEKDVSFMHVGRHIGDSILNKNLFTFLIXSHSKGKMS
SEVNEKSSSASINSFFPATVTENCELVSCSGGSRTVVHSLENNTDEGGLNKLKIRYEEFQ
EHKAEKPSLSQQAAHYMFFPSVVLSNCLSRPQKLAPVTYKLQQGNKQSRLKLNKKKHNFI
SLQEPASVNDVASVKESCYTQGNACSTFLIRCSALPSDLVQIPLEAFENKMPPSTANYTD
CQFADGSLETEQSFGLCGNKYTLRTKRKVNYETEDSESSFVAHNSKINLPQPIESVESLD
GSQKSRKRRKLSKNCHLLLLKYIIINRFRGRKNMLVKLGKVDSSEERVVLTEEKMNLYKK
LAPLKDFWPKVPDSPATKYPIYPLTPKKVKKGKPKHKSTKKKAGKPQKTGSKNIKRTLSF
RKRTHAILSPPSPSYNAEAEDCDYNYSDVMSKLGFLSERSTSPVNTSPPRCWSPTDPKAE
EILTNLDREALFSRMPNMYNSKTVNSSVGKSSRAKTQVKKCKKKFASPTVSTKKKKKINQ
ADKTADDGKKKRRTKQRQKAAEKVSSRKRVVYKDGKGNTCSTAEVKFVLKRQDFPEISYN
SVNSQPLHNQKDSPLPGYAAGYLPSAQLPSVADAHGNSSGCFHSLMGVDKPVDAQCLPVP
REDPRSSLASTPVASGKEVPKMNSQRPRTQSAVFRMKDSALIQNIFDPSNHSTQVSQNVC
ISKDKTSAKVDEIKNVQNRYLPPDGKLNEAYDSLDTVKMDQLYATNYLHCKDNNQQQIFC
LPEASKHSDPCSSILKSSEESPGPLQLPKNCFVTSLKSPVKQLNWDQNQRGFIFDMSHFK
PETVKQRSLTETTIQPKPISQYKNRTIVAPSAFSEGQSGLAVLKELLQKRQQKAQNADVT
QEPLPAKPQLSRNIPCPLEQNKAIKRSRSVTSPRKSCAPRNTKPKEKTPKLSKKESLSQQ
ITSRIDHSVSDXAPFFFSDPGFESCYSLEDSLSPDHNYNFDINAIGQTGFCSFYSASQFV
PADQNLPQKFLSDAVQDLGSGQTTENDFLCHNDQKSEEEKQHSSSTNKWIRSSSLSPELF
EKTSLDNNENHCHSQWRKNIHPSTSRPNSIDTSCTQETEVCLKEKFKLNRNTVNKERFLN
LPQPTSSDWIQSHIRKETTFEPCQPLDSVNTSFTSVLSSPDGELIDAASEDLELYVSRNN
EALTPTPDSSPRSTSSPSQSKNGSFTPRTAHVLKPLMSPPSREEIMATLLDHDLAETIYQ
EPFCSNPSDAPEKPREIGGRLLTVETRLPNNLLEFEGDFSLEGLRLWKTAFSAMTEGPRP
GSPPRYGHSPVNKRESNSHKTSEDKKIVIMPCKCAPSQQQVQIWLHAKEEYEHFKKLPRN
HPAELAKAAENFSSAVLSEEKSIEVVKAAKDLNLSSLEGERPVVPRKNSASVAETTKTQT
KETCDKSISTIETCVYTKNDIDSNKSPSESKTLITSPLEHDKEEEEEDYYVNYSSPDSPV
LPPWQQVASPDLKQPNSEETEWKSQAIILSSVERNGVVPVGSARNSPSTQDDVSTSFDTS
PFPVNEDPGNSEPICLHSTPIVQRKNQDGVPEVLGFTPLSTERKALKLNHKRGNNTDGLR
RVLLTTQVKNQFAALSAPKKETSQIEGPSLNNTYGFKVSVENLQEAKSLHEVQHLTLIVM
ELHARTRRDLEPDPEFDPICALFYCISSDTALPNTDKKEITGLXXLIETGHPQAKGSETK
PPCLTRSGVTGLEVXYATDERTLFREVVNIVKKVAYLYDPDILLGYEVQMHSWGYLLQRA
AALNIDLCQMISRVPDEKKENRFATELDEYGSDTMSEIHIVGRIILNIWRMMRHEVNLMN
YTFENVGFHVLHQRFPLFTFRVLSDWFDNKTDVYRWKMVDHYVTRVRGNLQLLDKLDLID
RTSEMARLFGIQFLHVLTRGSQYRVESMMLRVAKPMNYIAVTPSIQQRAQMKALQCVPLI
MEPESRFYSNAVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDAFKFGCTSLRVPPD
LLYQIRHDITVSPSGVAFVKPSVRKGVLPRMLEEILKTRIMVKQSMKAYKHDKAITRMLE
ARQLGLKFIANFTFGYTAANFSGRMPCTEVGDSIVHKARETLERAIKLVNDTKKWGARVV
YGDTDSIFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGY
MYETLDQKDPVFDAKGIETVRRDSCPAVSKILECSIKLLFETRDISQIKQYVQNQCMKLL
EGKASMQDFIFAKEYRGSSAYRPGSCVPALEITRRMLAYDRRSEPRVGERVPYVIVYGMP
GLPLIQLVRRPIEVLQDPNLRLNATYYITKQILPPLARVFSLIGIDVFSWYHELPRIQKA
ASTARIELEGRKGTISQYFTTLHCPVCDELTQYGICNKCRSQPQHVAVILNQEIRELERK
QEQLVKICKNCTGCFDRQIQCVSLNCPVLFKLSRVSRELSKAPYLRQLLDQF
NT seq
9519 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagtgcgaatcgtgaccgccgactactacatgggcagcccgctgcccggcctg
gatccctgccagtcccacttccgagaggccccgacccggcgggtccccgtcgtcagagtc
ttcggcgccacccctgcaggtcagaagacttgtctccacttacatggtatcttcccctat
ctctatgtaccatatgatggtttcggacagcatccagagcactatcttcgtcaagtggca
ttcagcattgacagagcacttaatgtagctttaggcaatccatcttctagtgttcaacat
gttttcaaagtgtcattagtatctggaacgcctttttatggttaccatgaaaaggagaga
cagtttatgaagatttatctttacaatcctgcaatggtaaaaagagtatgtgagcttctg
caaggtggagccataatgaacaaatcttaccagcctcatgaagcccatattccctacctc
cttcaactctttatagactacaacttatatggaatgaatttaataaatctggctgctgtc
aaattcagaaaggcaaggagaaaaagtgctgcatcaggtgtaagtaaacgtcatagaact
cacttgccagaaaattcaaacagcacatctttcattgaatgggaagaagatgaaatacca
agctctttaatgttgaaaggtgttgagccacaaagtacctgtgaattggaggtggatgca
gtagctgctgacattttaaatcaactggatattgaagcccagattggcaggaaccctggt
ttgcaagctatatgggaagatgaaaagcagagacggagacagaaatgtgaatcttctcag
attaagccacctgagtcacaagaccgtggatttgtgccagcaacagagagtgaaaaattt
ttccagaagagacttaaagaaatcctcaagcaaaatgacttctctgtaacgttgtcagga
tcagtggactacagtaatggatcagaggagttctctgctgagctaacactacattctgag
gtactttctcctgaagcctttcagtgtacgccagctaatatggtagaagtgcataaagat
aaaaagatgaacaaagaatccaataggatgcatactgataaagaagaggaagcacttatt
aatgaagaagcaattttaaacattgtggagaatagtcagagctttcagcctttgtctcaa
agactgagtcagactacagtttttatggacagtagtgctgatgaggccatgattgatctg
ttggctggattggagaatgatggatatcagatggaacatcacaaaacacactctcatcat
cgttctctcggaagctgtcgaaatgctcagaacagtgatgatgaagaaaatgagctgcag
tgtgagaaggaagaaatggaacttagcttgttaatgtcccaaaggtgggatagtagcatt
gaagagcctggaccaaaaagaaggtcagctggcaaaagtatgcatcaaagttcagcagaa
gaggattcatcttcagaggaagaaatggagtggagtggtaacaatatgcttctaaccaat
ctctctatacctcagttagatgggactgcagatgaaaatggtgacaatcctttgaataat
gaaagttctcgaactcattcctccgtcattgcaacaagcaagatgtcagtaaagacttca
atctttcacaaaggtgctgctacactagaacccccatcttctgctaaaattacttttcag
tgtaaacacacaagtgccctttctaaccatgttttgaataatgaagatttagtagaagac
ctctcacaaccaaacacagaaaatagacctgaactttcagtccattctcttgcaaaagaa
agcacttactcagcaaaatacccagctccgttcagcaatagtatccatctggaaaattct
cacaaagaaagtaacaagaaagatactctcccaatttcttcatgtgaaaataatattttt
gagtatgaagatgatattacatcagtcagcagacagatacctagtaggaagtatacaagc
ataagaaagactgaaaaggatgtctcttttatgcatgtgggccgccacattggcgacagc
atattgaataagaatttatttacttttctgatttgaagccactccaaaggtaaaatgtcc
tctgaagtaaatgaaaaatccagcagtgcaagtataaatagtttttttccagcaacagtt
accgaaaattgtgaattggtgtcttgttcaggaggcagtcgaactgtggtacattcactt
gaaaataacactgacgaaggtggccttaataagcttaaaattaggtatgaagaatttcaa
gagcataaggcagaaaagccaagtctcagtcaacaggcagcacactatatgttctttcct
agtgttgttctttccaattgtctcagtcgaccacagaaattggctcccgtgacgtataaa
ttacagcaaggcaacaaacagtccagattgaagctgaataaaaagaaacataattttatc
agtcttcaggagcctgcaagtgtaaatgatgttgcatcagtgaaggaaagctgctataca
caaggtaatgcttgtagtacattcctgataaggtgtagtgctttacctagtgacttagtt
caaattcctcttgaggcttttgaaaacaaaatgcctccaagtactgctaattatacggac
tgccagtttgcagatggctctcttgaaactgagcagtcatttggattatgtggcaataag
tatacgctccgaacgaaacggaaggtgaactatgagaccgaggacagtgaatcaagcttt
gtcgcacacaactcaaaaatcaatctacctcaaccaatagaaagtgttgaaagtttggat
gggtctcagaagtctcggaagcgtagaaaactttctaaaaattgccacctgttattatta
aaatatattatcatcaatagatttagagggagaaaaaatatgcttgttaaactaggaaaa
gtagattctagtgaggaaagagtagtactcacagaggaaaagatgaacttatataaaaag
cttgcacctttaaaggacttttggccaaaagttcctgattctcctgcaaccaaatatcct
atttatccactaacgccaaagaaagtcaaaaaaggaaagccaaaacacaagtcaacaaag
aaaaaagctggaaaaccacaaaaaacaggtagcaaaaatattaaaagaaccctatctttc
agaaaaaggactcatgcaattctttctcctccttcaccatcctacaatgctgaagctgaa
gactgtgactataactatagtgatgttatgtctaagttaggttttctttctgagagaagc
acaagcccagtaaatacatctccacctcgctgctggtctcccactgatccaaaagcagaa
gaaattttaaccaacctggacagggaagctttatttagtaggatgcccaatatgtacaac
agcaagactgttaattccagtgtaggaaaaagtagtcgagcaaaaactcaggttaagaaa
tgtaaaaagaaatttgctagccccactgtatctaccaagaaaaagaaaaagattaatcag
gctgataaaacagcagatgatggaaagaaaaaacgtagaactaaacaaaggcaaaaagca
gctgaaaaagtgtcctcaagaaagcgagttgtatataaagatggaaaaggaaatacatgc
tctactgccgaagtgaagtttgtgctgaaacgtcaagattttcctgagatttcttacaac
tctgtcaactcacagccacttcataaccagaaagacagtcctcttcccggttacgcagca
ggatatctaccatcagcacagcttccttcagtggctgatgcgcatggtaattcatcaggc
tgttttcattcattgatgggagttgataagcctgtagatgcacagtgtttacctgttcca
cgagaagaccctcgttcgtctcttgcatctactcctgtggcatctggaaaggaagtacca
aaaatgaactctcaaagacccaggactcaaagtgctgtgtttagaatgaaggattctgct
ctcattcaaaacatatttgatccatctaatcactcaactcaggtatcacagaatgtgtgc
atttctaaagataagacttctgcaaaagtagacgagataaaaaatgtgcaaaacagatat
ttaccaccagatgggaaattaaatgaagcttatgattctttggacacagtgaagatggat
cagttatatgccactaactatttgcattgtaaagacaacaatcaacagcagattttttgt
ttaccagaggcatccaagcattctgatccctgttcttctattcttaagtcatctgaggaa
agccctgggccacttcagttgcccaagaattgttttgtaacatctttgaagagtccggtg
aaacagttaaattgggatcaaaaccagagaggatttatttttgatatgtcacattttaaa
cctgaaacagttaaacagaggtctctgacagaaacaaccatacaaccaaaacccatctcc
caatataaaaacaggactatagtggccccatcagcattcagcgaaggacagtctggccta
gctgttttgaaagagttgctccagaagagacagcagaaagctcagaatgcagatgttaca
caggaaccactacccgctaaaccacagctgagcagaaatataccatgccctcttgaacag
aataaagcaatcaaaagatcacggtcagtcacatcaccaagaaaatcttgtgctcccagg
aatacaaagcctaaagaaaaaacgccaaagctttcaaaaaaggagtctttaagccagcag
atcactagtcgcatcgatcactctgtgtctgatnnagccccattttttttttcagaccct
ggttttgaaagctgctactcacttgaagacagcttgtctccagaccacaattacaacttt
gatattaatgctataggtcaaactggattttgcagtttttattctgcaagccagtttgtc
ccagcagatcaaaatttgccccagaaattcttgagtgatgcagttcaagatcttggctct
gggcaaacaacagaaaatgattttctgtgtcataatgaccaaaaatctgaggaagaaaag
cagcattcttcgagcacaaataagtggataaggtccagttccttgagccccgagcttttt
gagaaaacctcactggataataacgagaaccactgccatagtcaatggaggaaaaacatt
catccttcaacttctagacctaattccatcgatacctcttgtacccaagagactgaggtc
tgtttaaaggaaaaattcaaattgaatagaaatacagtgaataaagagagatttcttaat
cttcctcagccaaccagttcagactggattcaaagccacattagaaaagaaaccactttt
gaaccctgtcaaccacttgattcagttaatacctcttttacatctgtattgtcttctcct
gatggtgaacttatagatgcagcttctgaggatttagagttatatgtttcaagaaataat
gaggcattaactccaactccagatagttcaccaagatcaaccagttctccctcacaatca
aagaacggaagttttactcctcgtactgctcatgttcttaagcctctcatgtccccaccc
agtcgtgaagaaatcatggcaactttgctcgatcatgatcttgcagaaacaatttatcag
gaaccattttgcagcaatccttcagatgctccagaaaaaccgagggagattggaggacgg
cttctgacagtggaaactagacttccaaacaacctgcttgagtttgagggagatttctca
ttagaaggtctacgactctggaagactgcattttcagcaatgacagaaggtcctagacca
ggctctcctccccgttatggtcactctcctgttaataaaagagaaagtaatagccataaa
actagtgaagacaaaaaaatagtcataatgccatgcaaatgtgctccaagccaacagcaa
gttcagatatggcttcatgccaaagaagagtatgaacatttcaagaaattgcctaggaat
catcctgctgagctggcaaaggcagctgagaatttcagctctgcagtattgtctgaagag
aaatctatagaagtagtaaaagcagctaaagatttgaatttatctagcctcgaaggtgaa
agacctgttgtgcctagaaagaattctgcttctgtggcagaaactacaaaaacacaaacc
aaggaaacctgtgataagtctataagcactattgaaacttgcgtatatactaaaaatgac
atagactctaataaaagtccatctgaaagcaagacacttattacttcaccactagaacat
gataaggaggaggaggaggaagattattatgtcaattacagttcgccagattctccagta
cttcctccttggcagcaagtagcatctccagatctcaagcagcccaattcagaagagaca
gagtggaaaagtcaggctattattttgtcttctgtggaaagaaatggtgtagtacctgtt
ggaagtgcacgaaactctccatccacccaagatgatgttagtacatcctttgacacatca
ccatttccagttaatgaagatcctggaaattctgagcccatttgcctacacagtacaccc
attgtgcagagaaaaaatcaagatggagtacctgaagttcttggctttactcctttatcc
acagaacgaaaagccctgaaactgaaccacaagagaggaaataatactgatggtcttaga
agagtacttctaaccacgcaagtgaagaatcaatttgcagccctcagcgctccaaagaaa
gagacttctcagattgaaggaccatctttaaacaacacttatggttttaaagtcagtgtg
gaaaacctccaggaagcaaaatctttacatgaggtccaacaccttaccctcatcgttatg
gagctacatgctcgaaccagacgagatttggaaccagacccagagtttgatcctatctgt
gctttattctattgcatctcatcggacacagcactgccaaatactgataaaaaagaaatc
actgggctatagtgattgatagagacaggacaccctcaggccaagggatcagagaccaag
cccccttgtctcacaagatctggagttacaggactagaagtcnagtacgctactgatgaa
agaactcttttcagggaagtagtgaatattgttaaaaaggtagcatatctatatgaccca
gacattttgttaggctatgaagtccagatgcattcctggggttatctcttacagagggct
gctgcgctaaatattgatttatgccagatgatttctcgtgtgccagatgaaaagaaagag
aacagatttgcgactgagctggatgaatacggatcagatacaatgagtgaaatacatatt
gttgggcgaattatcttaaatatttggagaatgatgagacatgaggttaatctaatgaat
tacacttttgaaaacgtgggctttcatgttcttcatcaacgttttcctttatttactttc
cgagttctgtctgattggtttgataataagacagatgtctacaggtggaaaatggttgat
cattatgttacccgggtccgtgggaatctccagttgttagacaaactggatttgattgac
agaacaagtgaaatggcaagactttttggcattcagttcttacatgtattaacaagaggc
tcccagtatcgtgtggagtctatgatgctgcgtgttgcaaaaccaatgaactatattgct
gtgacacccagtatccagcagcgagctcaaatgaaagccctgcaatgtgttcccttaata
atggaaccagaatcccgcttctacagcaatgctgttcttgtattagatttccagtccttg
tatccttccattgtcattgcatacaactactgtttttcaacctgcctgggacacgttgaa
aacttaggaaaatatgatgcattcaaatttggctgtacatctctcagagtgcctcctgac
ttactttaccagattaggcatgatatcacagtgtcacccagtggagtagcttttgtcaag
ccttcagtaagaaagggtgtactgccaagaatgctagaagaaatcttgaagactaggata
atggtaaaacagtcaatgaaggcttataaacatgacaaggctataactcgaatgctcgaa
gctcgtcagctgggtcttaaatttatagctaattttacatttggttacactgctgctaat
ttctctggaagaatgccctgcactgaggttggggatagcattgtccacaaagccagagaa
acattagagcgtgctataaaactggtgaatgatacaaaaaaatggggtgctcgcgttgtg
tatggtgatactgacagcatatttgtactcttgaaaggagccacaaaggagcagtctttt
aagattggtcaagaaattgctgaggctgtaacagcaacaaaccccaaacctgttaaactg
aagtttgaaaaggtctacttgccatgtgtcctgcaaactaaaaagaggtacgtgggttac
atgtatgaaacactggaccagaaggacccagtatttgacgcgaaaggcatagagacagtc
cgaagggactcctgtcctgctgtttccaagatacttgagtgttctatcaagctgctattt
gaaacacgggacataagtcagatcaaacagtacgttcagaatcaatgcatgaagttactg
gaaggaaaagccagcatgcaagacttcatctttgctaaagagtacagagggagctcagct
tacaggcctggatcctgtgtgccagcgctggagatcaccaggagaatgctcgcctatgac
cgtcgctctgaaccacgagttggggagcgagtgccctacgtcattgtgtatggcatgccc
ggactgcctttgatacagctggtgaggcggcccatcgaagtcctgcaagatcccaacctg
agactgaatgctacgtactatatcaccaaacagattctgccaccgctggccagggttttc
tcgctgattggcatagacgtcttcagctggtaccatgagttgccacggattcaaaaagct
gcttcgactgcccgcattgagctagaaggacgcaaaggcacaatttcccagtatttcacg
accttacactgtcccgtgtgtgatgaactgacccaatatgggatttgtaataaatgcaga
agccagccacagcatgtggcagtgattctcaaccaagaaatccgagagctggagcgtaag
caagaacagctggtcaagatatgcaagaactgcacaggctgctttgatcgacagatccag
tgcgtctccctcaactgtcccgtacttttcaagctctccagagtaagcagggaactgtca
aaggcgccgtatcttcgccagctgcttgaccagttttga
DBGET
integrated database retrieval system
