KEGG   Cuculus canorus (common cuckoo): 104062767
Entry
104062767         CDS       T08597                                 
Symbol
ATG5
Name
(RefSeq) autophagy protein 5
  KO
K08339  autophagy-related protein 5
Organism
cuca  Cuculus canorus (common cuckoo)
Pathway
cuca04136  Autophagy - other
cuca04140  Autophagy - animal
cuca04216  Ferroptosis
cuca04621  NOD-like receptor signaling pathway
cuca04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104062767 (ATG5)
   04136 Autophagy - other
    104062767 (ATG5)
  09143 Cell growth and death
   04216 Ferroptosis
    104062767 (ATG5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    104062767 (ATG5)
   04622 RIG-I-like receptor signaling pathway
    104062767 (ATG5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cuca04131]
    104062767 (ATG5)
   03029 Mitochondrial biogenesis [BR:cuca03029]
    104062767 (ATG5)
Membrane trafficking [BR:cuca04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    104062767 (ATG5)
Mitochondrial biogenesis [BR:cuca03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    104062767 (ATG5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF6782
Other DBs
NCBI-GeneID: 104062767
NCBI-ProteinID: XP_053918874
LinkDB
Position
3:complement(30247897..30323408)
AA seq 275 aa
MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRISYLTLVTDKVKKHFQKVM
RQDEVSEIWFEYEGTPLKWHYPIGLLFDLHASNTALPWCITVHFKNFPEKDLLHCHSKDV
IEAHFMACIKEADALKHKSQVINEMQKKDHKQLWMGLQNDKFEQFWAINRKLMEYPPEEN
GFRYIPFRIYQATTERPFIQKLFRPTASGGQLHTLGDLLKDVCPSAITPEDGEQKTQVMI
HGIEPMLETPIQWLSEHMSYPDNFLHISIIPRPTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atgacagatgacaaagatgtacttcgagatgtgtggtttggacgaatacctacctgtttt
actctgtatcaggatgagataaccgagagggaagctgaaccttactatttgcttttgcca
aggataagctacttgacgctggtaacagacaaagtgaagaaacactttcagaaagttatg
agacaagatgaagttagtgaaatatggtttgaatatgaaggcacaccactgaaatggcat
tacccaattggtttgctgtttgatctccatgcgtcaaatacagcccttccttggtgcatc
acagtgcattttaagaattttccagaaaaggatcttctacattgccattctaaggatgtg
attgaagctcattttatggcttgtataaaagaagcagatgctctaaagcacaaaagtcaa
gtcatcaatgagatgcaaaaaaaggatcataaacaactgtggatgggattacagaatgat
aaatttgagcagttttgggcaataaatcgaaaactcatggagtatcccccagaagagaat
ggatttcgatacatcccatttagaatttatcaggcaacaacagagagaccttttatacag
aagctatttcgaccaactgcttcaggaggacagttgcatactttgggagatctgctaaaa
gatgtctgtcctagtgctatcacccctgaagatggagagcagaagactcaagtaatgatt
catggaattgagccaatgctggaaacgcccatacagtggctaagtgaacatatgagctat
ccggataattttctccacattagtatcattccccgacctactgattga

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