Cuculus canorus (common cuckoo): 104062800
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Entry
104062800 CDS
T08597
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104062800 (SMC4)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
104062800 (SMC4)
Condensin II
104062800 (SMC4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
THOC7
Motif
Other DBs
NCBI-GeneID:
104062800
NCBI-ProteinID:
XP_053930593
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Position
9:complement(23393826..23437943)
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AA seq
1297 aa
AA seq
DB search
MPSKSTKASTADHQKGREPLEEPTSDMEVENEGNRQLGEVSPEAVSNEVLDNRSLEEILG
SISPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNVI
DSMLFVFGYRAQKIRSKKLSVLIHNSDEHMNIQSCTVEVHFQKIIDKEGDDYEVIPNSKF
CISRTAYRDNSSVYHIDGKKKTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQ
TEHDEGMLEYLEDLIGSARLRDPIQTLCRRVEILNEQRGEKLNRVKMVEKEKDALEADKN
KAIEFLCLENRIFKEKNHICQFYIHDLKKRINDKEIQKEQINEETKDINEKSSKLADDMK
TKNTTLKELEKKLNKITKFIEENKEKFSQLDLQDVKVRENLKHAKSKAKKLEKELQKDKE
KVEELKKVPHNSEKAINEATSKKMLLEKTKEKEEEKFKQVMDNLKKETQGLQEEKESKEK
ELMEFSKAVNEARSKMDVAQSELDIYLSRHNTAVAQLNQAKEALMTTSETLKDRKAAIKD
IGIKLPQDEQELKEKENELKKLATEESDAKNLVRNLRQKVEEAKSSLAQSRSRGKVLEAL
LQQKRSGNIPGLYGRLGDLGAIDEKYDIAISSCCGALDNIVVDTIDTAQTCVNFLKTSGI
GVATFIALDKMTVWEKKIEKIPTPENIPRLFDLVRVEDEKVRLAFYFALRDTLVANNLEE
ATRVAFQKDKRWRVVTLQGQIIEQSGTMTGGGGKVMKGRMGASVVMDVSEEEVSKMESQL
QRNAKRAVQCEEEKLHLEETIKNLHQGVREMRNTLEKYTASIQSLSEQEIHLKTQVEELE
ANVIAAAPDKIKQKELEKTLDSYKKDYDCLAEKAGKMENEVKRLHNLIIEINNKKLKAQQ
DKLDKISKEIDECTSAITKAQVAAKTADRNLKKSEEAVLRTEKEIAANEKEMKDLKEELT
TLEDKATAVINDCKQAEAALPAVQEEHHSLLQEIKTIQDDEHALQKEALNVKLKLEQVDS
HISAHQSKIKYWQKEMSKLSLHPIEDKPPEELPVLSQEELEAIKDPDAINNQIALLEAQC
QEMKPNLAAIAEYRKKEELYLKRVSELDDITNERDKFRQAFEDLRKQRLNEFMAGFNVIT
NKLKENYQMLTLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKKIFNLSGGEKTLSSLAL
VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLI
GIYKTHNTTKSVATNPKVIAAKGLAELSALGCGVTEK
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtaagagcaccaaagcctctacagcagaccatcagaaaggcagagagccctta
gaggagcccaccagtgacatggaagtggaaaacgaaggcaacaggcagcttggtgaagta
tctccagaagcagtctcaaatgaggtgcttgataatcgaagtttagaagagattttgggc
agcatctctcctcccccacctccggcaatgaccaatgaagctggtgctcctcgtctcatg
ataactcatattgtaaaccagaacttcaaatcctatgcaggggagcaaactttgggacct
tttcataagcgtttttcatgtattattgggccaaatggcagtgggaaatccaatgtcatt
gattcaatgctttttgtgtttgggtatcgagcacaaaaaatcagatccaaaaagctctct
gtgctgatccataattctgacgaacacatgaacatccagagctgtactgtggaagtccac
ttccaaaagatcattgacaaggaaggagatgattatgaagtcattcctaacagcaaattt
tgtatatccagaactgcttatagagataattcttctgtctaccacattgatgggaagaaa
aagaccttcaaagatgttggtattcttcttcgaagccatggaattgatctggaccataac
aggttcttaattttacagggtgaagttgaacaaatcgcaatgatgaaaccaaaaggccag
actgaacatgatgaaggcatgcttgaatacttagaagacttaataggatctgcacgacta
agagatcctatccaaactctgtgtcgcagggtagagattttaaatgaacagagaggagaa
aagttaaatagagttaaaatggtggaaaaagaaaaggatgccttggaagccgacaagaat
aaagccattgaatttctttgtttggaaaacagaatttttaaagaaaagaatcatatctgc
caattctatatccatgacctcaagaaacgaataaatgacaaggaaatacagaaagaacaa
attaacgaagaaacaaaagacattaatgagaagagtagtaaacttgcagatgatatgaaa
accaagaatacaactttaaaagaactggaaaagaaactcaataaaattacaaagttcata
gaggaaaataaagaaaaatttagtcagttggatttgcaggatgttaaagtaagggaaaat
ctaaaacatgccaaaagcaaggctaaaaagctggagaaggaactccaaaaggacaaagaa
aaggtagaagaattgaaaaaagtacctcacaatagtgaaaaagctatcaacgaagcaaca
tcgaagaaaatgcttcttgaaaagacaaaagagaaggaagaagaaaaattcaagcaggtt
atggataaccttaagaaagaaacacaaggacttcaggaagaaaaagagagcaaagagaaa
gagctcatggaattcagtaaagcagtgaatgaagcgcgttcaaagatggatgtagcccag
tcagagcttgatatctatctcagccgtcataatactgctgtggctcagttaaatcaggca
aaggaggctctgatgactacttcagaaactcttaaggacaggaaagctgctatcaaagat
ataggtataaaattaccccaagatgaacaggaattaaaggagaaagagaatgagcttaag
aagctggcaacagaagaatcagatgcaaagaatcttgttcgaaatctgcgtcaaaaagta
gaagaagccaagagttctttagcacaaagtcgcagtcgaggaaaagtgcttgaggctctg
cttcagcagaagagatctggaaatattcctggactgtacggaagactgggagacttggga
gctatcgatgaaaagtacgacatcgctatttcatcctgttgtggtgccttagacaacatc
gttgttgatacaattgatactgcacagacatgtgtgaatttcttaaagacaagtggaatt
ggagttgccacatttatagctctggacaaaatgactgtatgggaaaaaaaaattgaaaaa
atcccaactcctgaaaatattcctcggttgtttgatctggtgagggtagaagatgagaag
gttcgcctggctttttactttgcattacgtgacaccctagtagctaacaacttggaagaa
gctaccagagtagcattccaaaaagataaaagatggagagtggtaacactgcaaggacaa
atcattgaacagtcaggaacaatgactggtggtggaggtaaagtcatgaagggcagaatg
ggtgcctcagttgtaatggatgtttcagaagaagaggtcagtaaaatggaatctcagctg
cagaggaatgctaaaagagcagtacagtgtgaagaagagaaattacatcttgaagaaacc
ataaaaaatctgcaccagggtgttcgggaaatgagaaatactttagaaaagtacacagca
agtatccagagtttatctgaacaggaaattcatctaaaaacccaagttgaggaacttgaa
gcaaatgtaattgctgctgctccagacaaaatcaaacagaaggaactggaaaaaaccctt
gacagttataaaaaagattatgattgccttgctgagaaagctgggaaaatggaaaatgaa
gtgaaacggttacataacctcataattgagatcaataataaaaaacttaaagcacagcaa
gacaaacttgataagatcagcaaagaaatagatgaatgtacttcagctattacgaaagcc
caagtggcagccaagactgcagacagaaacctgaaaaaatctgaagaggctgttcttcgc
acagaaaaggaaattgcagcaaatgaaaaagaaatgaaagacttaaaagaagagctgacc
acactagaagacaaagctactgcagttataaatgactgcaaacaagctgaagcagcattg
ccagcagttcaggaggagcatcacagtttactccaggagattaaaactattcaagatgat
gagcatgcacttcaaaaggaagctcttaatgttaagctgaaacttgaacaggttgatagt
catatttctgcacaccaatcaaagattaaatactggcaaaaagagatgtcaaagttatca
ctgcaccccatagaagataaaccacctgaagaacttccagtactaagtcaagaagagctc
gaggctatcaaggatccagatgctatcaataatcagatagcccttctggaagcccagtgt
caagaaatgaaacccaacctggctgcgatagcagaatataggaagaaggaagaactgtac
ttgaaacgtgtgtctgaactggatgacattaccaatgagagagacaagttccgacaagct
tttgaagacctgaggaaacaaaggctgaatgaatttatggcaggatttaatgtaataaca
aataagctgaaagaaaactaccagatgctgactttgggaggggatgctgaattagaactt
gtggacagtctggatcctttctctgagggaatcgtgtttagcgttcggcctccgaagaaa
agttggaagaagatatttaatttatcaggaggagagaagactcttagttccttggctctt
gtttttgctcttcatcattacaagccaacgccactttattttatggatgagattgatgca
gcacttgacttcaagaatgtatctattgtagccttttacatatacgagcaaacgaaaaat
gcacagtttatcatcatctccctgcgaaacaacatgtttgagatcgcagacagattaatt
ggaatttataagactcacaataccacaaaaagcgtggctacaaaccccaaagttattgca
gctaaaggactggcagagctcagcgcccttggatgtggggtaactgaaaaatag
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