Cuculus canorus (common cuckoo): 104062847
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Entry
104062847 CDS
T08597
Symbol
BCAN
Name
(RefSeq) brevican core protein isoform X1
KO
K06795
brevican
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cuca00535
]
104062847 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
cuca00536
]
104062847 (BCAN)
04091 Lectins [BR:
cuca04091
]
104062847 (BCAN)
Proteoglycans [BR:
cuca00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
104062847 (BCAN)
Glycosaminoglycan binding proteins [BR:
cuca00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
104062847 (BCAN)
Lectins [BR:
cuca04091
]
C-Type lectins
Lecticans
104062847 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
ig
Izumo-Ig
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
104062847
NCBI-ProteinID:
XP_053907171
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All DBs
Position
28:complement(3536659..3554707)
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AA seq
936 aa
AA seq
DB search
MASALPLLLLWLFVPTVVPEVFGLADGTEDLKALQVSIPRHPALDAVLAGDITIPCLINY
LGAQPTAGPAGRRAVLGTPRVKWTFISEGREVEILVARGDRVKVSEEYRFRASLPIFHQR
YTNASLLLTELRPNDSGIYRCDVQHGIEDGHDILYVKVKGVVFHYREGSTRYAYTFAEAQ
EACARIGARIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIHTPREACYGDMNGFPGVRN
YGVVDPEDMYDVYCYAEDLPGEIFLETAPDKFTLEEAAARCQALGAELASTGQLYAAWSV
GLDACSPGWLADGSVRYPIVTPRERCGGALPGVKTIFLFRNQTGFPDAQSRYDAYCFREG
TNSFPEAAGKYQAREPEGLQEIVTVAEKLEELQLPKAQVEIESRGAIYAVPFFEDADLEK
PSPSPEDGPGPGARHPPLDTSVSSEEEQGAALGSTSVESPGGGRDPVEPDGAAGTQTLST
AQREGSPGAPSSAEGDTPPPEGIPQPPSPTIPTCRPDRPLDAVGRPSRTASPGPPGQKVT
TPTSATSATSTDSREPGGTPRRGHESDGASSPVATAEDAELSGDVGESPGVSPLPPAPSQ
PQEEAEEQSGSLWVPSPVAPGDGSSVPAVTPWHTELASSSAVGAGGEEAVPQPAGTEHTI
PAASSEEEEEKEEEEEEEKEDEQPAPSVATVEGFLATIPGEPGGCIPNPCLNGGTCMENG
SHLACLCLPGYGGSSCERPLEKCSPGWENFQGACYKYFSTRRSWEDAESQCRYYGGHLAT
ILTPEEQDFINDQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSGENCV
VIVWHDGGQWSDVPCNYHLSYTCKMGLVHCGPPPNVSNARAFGKPKQRYEIGSITRYQCR
LGFIQRRSPIIRCQEDGTWEPPQLLCRPGLAQPPED
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagccctcccgctgctgctcctctggttgtttgtccccacggtggtcccggag
gtgtttggcctcgcagatggcacagaggacctcaaggctctgcaggtctccatcccacgt
cacccggctctcgatgccgtgctggcaggcgacatcaccatcccctgcctcatcaactac
ctcggtgcccagcccaccgcgggtccagccggacgccgggcggtcctgggaaccccccgg
gtcaagtggacgttcatctctgagggcagggaggtggagatcttggtagcccggggggat
agggtgaaggtgagcgaagagtatcgcttccgtgcctccttgcccatcttccaccagcgc
tacaccaacgcctccctgctgctcaccgagctgcggcccaatgactcggggatctatcgc
tgcgacgtgcagcacggcatcgaggacggccacgacatcctctacgtcaaagtcaaaggg
gtggtgtttcactaccgggagggctccacgcgctacgcctacaccttcgccgaggcgcag
gaagcttgtgccaggatcggtgctcgcatcgccactcccgagcaactctacgctgcctac
ctcggcggctacgagcagtgtgatgccggctggatcgccgaccagaccgtcaggtacccc
atccacacaccccgagaggcctgttacggagacatgaacggcttccccggggtgaggaac
tacggggtggtggatccagaggacatgtacgacgtgtactgctacgccgaggacctccca
ggggagatatttttggagacagccccagacaaattcacgctggaggaggcggctgcgcgg
tgccaggcgctgggtgcagagttggcgagcacagggcagctctacgcggcttggagcgtg
gggctggatgcgtgcagccccggctggctggccgacggcagcgtccgctaccccatcgtc
acccctcgggaacgctgcggcggagctctgccgggcgtcaaaaccatcttcctcttccgc
aaccagacgggattccccgatgcccagagcagatacgatgcgtattgctttcgagaaggg
acaaactctttccctgaggctgcaggaaaataccaagcccgagagcccgagggcctccag
gagattgttacagtggcagaaaagctggaggagctgcagctgcccaaagcgcaagtggag
attgagtcgcgaggggctatatacgccgtccctttctttgaggacgctgacttggaaaag
ccgagcccgtcccccgaagacggaccagggccaggggcccggcaccccccgctagatacc
tccgtgtcctcagaggaggaacagggagcggcgctgggcagcacgtcggtggagagcccg
ggcggagggcgagaccccgtggagccggatggagccgccggcacgcagacgctctccacg
gcccaacgggagggatccccgggtgccccatcctcagcagaaggtgacacaccacctccc
gagggcattcctcagccacccagccccaccatccccacgtgccgccccgaccgcccgttg
gacgccgtggggcggccgtcacgcactgccagccctgggccacccgggcagaaggtgacg
acgccaaccagtgccacttctgccacctcgacagatagccgagagcccggtgggaccccc
cggcgcggccacgagtctgacggggcgagcagccctgtggccaccgctgaagatgctgag
ctctcgggagatgtaggggaaagccccggggtgtccccgttgccccccgcgccatcgcag
ccgcaggaggaggcagaggagcagtcggggtccctgtgggtcccctcgcccgtggccccg
ggggatgggagcagcgtcccggcggtgaccccatggcacacagagctcgccagcagcagc
gcggtgggtgcaggaggcgaggaggctgtgccacaacccgcgggcactgaacacacgatt
ccggctgcttcttcggaagaggaggaagagaaggaagaggaggaggaggaagagaaggag
gatgaacaacccgctccctctgttgcaaccgtggaggggttcctcgcaaccattcccgga
gaaccaggtggctgcatccccaacccctgcctgaacggagggacctgcatggagaacggc
tcccacctcgcctgcctgtgcctgcccggctacggaggcagcagctgtgaaagaccgctg
gagaagtgcagccccggctgggagaacttccaaggagcctgctacaagtatttctccacc
cggaggagctgggaggatgcagagagccagtgcaggtattatggggggcacctggccacc
atcctgacccctgaagagcaggacttcatcaacgaccagtacagggagtaccagtggatc
ggcttgaacgaccggaccatcgaaggggatttccagtggtccgatgggagtcctttgctc
tacgagaactggcaccccgggcagcccgacagctattttctctctggggagaactgcgtg
gtcatcgtgtggcacgacggggggcaatggagcgatgtgccctgcaactaccacctctcc
tatacttgcaaaatggggctggtgcattgtgggccccccccaaacgtgagcaacgcccgc
gccttcggcaaaccaaagcagcgctatgagatcggctccatcacgcggtaccagtgccgt
ctcggcttcatccagcgccgctcgcccatcatccggtgccaagaggatgggacgtgggag
cccccccagctgctctgccgccccggcctggctcagccccccgaggactga
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