Cuculus canorus (common cuckoo): 104062886
Help
Entry
104062886 CDS
T08597
Symbol
NPNT
Name
(RefSeq) nephronectin isoform X1
KO
K06824
nephronectin
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04512
ECM-receptor interaction
cuca04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104062886 (NPNT)
04518 Integrin signaling
104062886 (NPNT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
MAM
cEGF
FXa_inhibition
EGF_3
EGF
EGF_PEAR1L
EGF_MSP1_1
JAG1-like_EGF2
Plasmod_Pvs28
EGF_DL_JAG
EGF_2
Motif
Other DBs
NCBI-GeneID:
104062886
NCBI-ProteinID:
XP_053921620
LinkDB
All DBs
Position
4:54784681..54838561
Genome browser
AA seq
645 aa
AA seq
DB search
MELCLRLLLPACLALPAAGLASRWPRQIVSSPGLCRFGSRIDCCWGWARLSWGQCQPFYV
LRQRIASLRCQPKAICQPGCKHGECVGPNKCKCHLGYTGKTCNQDEQLYTSAPGQSSEAL
LFRPLDLHARCIVSRDLNECGLKPRPCKHRCMNTYGSYKCYCLNGYMLMPDGTCSNAVSC
SMANCQYGCDVLKGEVRCRCPSPGLQLGPDGRTCIDIDECATGRVICPRFRHCVNTFGSY
ICKCHKGFDLMYIGGKYQCHDIDECSLGHHQCGSFSRCYNTPGSYKCKCKEGFRDNGTNC
ILIPNVMIEPPGPYHTFKGNSTLSKGGSGITSRIPDVGGTRQPLRSPYVPAIVTERPVTR
PMTRPTPRPTTRPTPRPTTRLTAKPTTRSVPITTRPVTMPVTRPPPPTPPQPTTLRPTLP
PQTTPLLTTEEPSHVPIETTSSQGITDDNRIQRDPQKPRGDVFIPRQPGVSNNLFEILEI
ERGITADEFEANDDPGMLVHSCNFDSGLCGWIKDKDDDLHWEPVRDASGGQYLTISDPKG
KEGRVAHLILPLGHLAQAGDLCLSFRHKVPGLHSGALQVFVRKNGAHGPAVWGRNGGHGW
RQTHISLRGLGIKSVIFRGEKGKGRTGDVGLDDVVLRRGRCSEEH
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggagctctgcctgcggctgctgctgcccgcctgcctcgccctgccggccgccggcctc
gccagcaggtggcccagacaaatagtgtcctccccaggactctgtcggtttggaagtaga
attgactgctgctggggctgggcccgattgtcctggggacaatgccaacctttctacgtc
ttaaggcagagaatagccagcctaaggtgccagcccaaagctatatgccagccaggatgc
aaacatggtgaatgcgttggaccgaacaagtgtaagtgccacctggggtacactggaaaa
acctgcaaccaagatgagcagctatatacaagtgcacctggtcagagcagtgaagcactt
ctattccgccctctggatcttcatgcaagatgtatagtgtcaagggatctaaatgagtgt
ggactaaagccgcggccgtgcaaacaccggtgtatgaatacctatggcagctacaagtgc
tactgtctgaatggctacatgcttatgccagatggaacgtgctcgaatgctgtttcttgc
tcgatggcaaactgtcagtatggctgtgatgtactgaaaggggaagtacgctgccgctgt
ccttctccagggctgcagctagggcctgatggcaggacctgcatagatattgatgaatgt
gctactgggagagttatctgtccacgatttaggcactgtgtcaatacatttggaagctac
atatgcaagtgtcataaagggtttgatctaatgtacattggaggcaaataccaatgccat
gatatagatgaatgttcccttggccaccatcagtgtggtagtttttctcgatgttacaat
acaccaggatcctacaaatgcaagtgtaaagaagggttcagagacaatggaacaaattgc
atacttattcctaatgttatgattgaaccgcctggtccatatcatacattcaagggcaac
agcacgctctctaagggaggcagtggtataaccagtaggattcctgatgttggaggcaca
aggcaacccctcagatcaccatatgtacccgctattgttacagaaaggccagtgaccagg
ccaatgactcggcctacacccaggccaacaactcgtcccacacccaggccaacaactcga
ctgacagcaaagccaaccactaggtctgtgccaatcacaacaaggccagtaacgatgcca
gtgacgaggcctccacctccaacaccacctcaacctacaacattaagacctacactacca
ccacaaacaactcctctgctaacaactgaagagccttcacatgttcctattgaaactaca
tcttcccaaggaattacagatgacaacaggatccagagagatcctcagaaaccccgaggc
gatgtgttcattccacgccagccaggagtgagcaataatctgtttgaaatacttgaaatc
gaaagagggattactgctgatgaatttgaagcaaatgatgacccaggtatgctggtgcat
agctgtaattttgacagtggactgtgcggctggatcaaggacaaagatgatgacttgcac
tgggaaccagtaagagatgcatcagggggacagtatcttaccatctctgaccccaaaggc
aaagaaggaagagtagcacatcttatcctgccattgggtcacttggctcaggctggtgac
ttgtgcctgtcatttaggcataaggtgcctggactgcattctggtgccctccaagtcttt
gtaaggaaaaacggtgctcacggaccagccgtttggggaagaaatggtggccatggctgg
agacagacacatatatctttgcgaggattaggcatcaagagtgttattttcagaggggag
aaagggaaaggaagaactggggatgttggactggatgatgtggtcttgaggagaggacgc
tgctctgaagagcactag
DBGET
integrated database retrieval system