Cuculus canorus (common cuckoo): 104062951
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Entry
104062951 CDS
T08597
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104062951 (CHD2)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104062951 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
104062951
NCBI-ProteinID:
XP_053933528
LinkDB
All DBs
Position
12:10097022..10186800
Genome browser
AA seq
1835 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSEQGSESNSSSESSESQS
ESESESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNI
KDEASSESENESPKRRGQKQVKRLNKWKREISGEEEDEDGGDQGTSGESEPEPKKIKARR
PVQRRTVAKTSIKKPHKPQRGKKKKKPDSSEDDDDDDDDETPKRQTRRRAAKNVSYKEDD
DFETDSDDLIEMTGEGVDEQQDNSETIEKVLDIRIGKKGATGASTTVYATEANGNPSADF
DPEKDEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVS
PEDVEYFNCQQELASELNKQYQIVERVIAVKTSKTATGHSDFPASSRKTSSNDPEYLCKW
MGLPYAECSWEDETLISKKFQHCIDSFNNRNNSKTIPTRDCKVLKQRPRFVALKKQPSYI
GSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL
VVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYE
ILLKDKAVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELW
SLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQIL
RVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERE
NGIETLQSLVRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRL
DGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQA
QARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGR
SNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDEL
LSQFKVANFATMEEEETELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSS
TKKAQTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFTDAEI
RRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENP
GEAGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPADPEERKKYRLTCRVKAA
HFDVDWGVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVD
YLLKLLKKDLDKKENMKDGEEGKLKKRKPRVKKENKAPKIKDEHGNELSSPRHSDNQSEE
GEVKEDGLEKSPVKKKQKKKENKENKEKQTSTKKEKESDKEKKKTKDKKEKPKGGEAKSG
SKGRRSQGPVHITAGSEPIPIGEDEDDDLDQETFSVCKERMRPVKKALKQLDKPDKGLTV
QEQLEHTRNCLLKIGDRISECLKAYSDQDLIKLWRRNLWIFVSKFTEFDARKLHKLYKMA
HKKRSQEEEEQKKKEDMSSMKKPFRPEPSGSSRDSVMSQSHMPHNPHSQKMHLPPSHAQQ
QMHGHPRDNYGHPNKRHFSNTDRGEWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHY
GDRRSRGDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDEFRP
QNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKSGDYKQPLPPPHPGVSDPRSPPSQ
KSPHDSKSPLDHRSPLDRSLEQKNNPDYNWNIRKA
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagcaatgcatcg
agtcactcggcatccgaagaagcctctggctctgactctgcaagccaatctgaaagtgag
cagggcagcgagcagggcagcgagtcaaacagcagctcggagtcctctgaaagtcagtct
gaatctgaaagtgaatcaacgggttcaaaatcccagcagacccctcctgaaaccaaagaa
aaaccggcctctaagaaggaaaggatagcagatgttaaaaagatgtgggaagaatatcct
gatgtttatggggttaggaggtcaaaccgaagcagacaagaaccgtcacgatttaatata
aaagatgaggcaagtagtgaatctgaaaatgagagcccaaaaagaagaggccagaagcaa
gtgaaaagactaaataaatggaaaagagagatttctggtgaagaagaggatgaagatggg
ggggatcaaggcaccagtggagagagtgagcctgaaccgaagaaaattaaagcaagaaga
cctgtccaaaggagaacagtggccaaaaccagtattaaaaagcctcacaaaccccagcgt
gggaagaagaaaaagaaaccggactcatctgaagatgatgatgatgatgatgatgatgag
acccccaagagacaaactcgacgaagagcggccaaaaatgtcagttacaaagaagatgat
gattttgagacggattctgatgacttgatagagatgactggggaaggagttgatgaacaa
caagacaacagtgaaactattgagaaagtcttggacatcaggattgggaaaaaaggagcc
actggtgcttccaccacagtgtatgcaaccgaagccaacggcaatccaagtgctgacttt
gatcctgaaaaggatgaaggagaagttcagtacctgatcaaatggaaaggctggtcatac
atccatagcacatgggagagtgaagagtccctgcagcagcagaaagtgaagggcctgaaa
aagctggaaaacttcaagaaaaaagaggaggagatcaagcaatggctgggcaaggtatca
cctgaagatgtagaatatttcaactgccaacaagagctcgcttcagagctgaacaaacaa
tatcaaatagtggagagagtaattgctgtgaagaccagcaagactgcgacagggcattca
gatttcccagcaagcagtcgcaaaacatcctcgaatgaccccgaatacctgtgtaagtgg
atggggctgccctacgctgagtgcagctgggaagatgagactctgataagcaagaaattt
cagcactgcattgacagcttcaacaaccgtaacaactcaaaaacaattcctacccgggac
tgcaaggtattgaagcagagaccgaggtttgttgccttgaagaaacagccttcttacatt
ggcagtgagaacctggagctgcgagattaccagctggagggccttaactggcttgctcac
tcgtggtgcaagaacaacagtgtgatcctggctgatgaaatgggcctgggcaaaacaatt
cagacaatatcgttcctatcatacctcttccatcagcaccagctttatggccctttcctg
gtggtggtgcccttgtccacgctcacctcatggcagagagagtttgaagtgtgggcacct
gagataaatgtggtggtttacattggagacctcatgagcaggaatatgatacgtgaatat
gagtggatccactctcagtctaaaaggttgaaattcaatgcacttatcacaacatacgag
atccttctcaaggataaggctgttttgggaagtattaactgggcctttctaggcgtggat
gaagcccatcggttgaaaaatgatgactctttgctgtacaaaacattgattgatttcaag
tcaaaccacaggctgctgatcactggcactccacttcaaaattctctcaaagagctctgg
tctctactgcatttcatcatgccggagaaatttgaattctgggaagattttgaagaggat
catggaaaaggtagagagaatggctaccagagccttcacaaagtcctggagccatttctt
ctacgcagagtgaagaaggatgtggagaaatctttgccagccaaagtggagcagatcctc
cgcgtggaaatgtctgctttgcagaaacagtattacaagtggattttgacaagaaactac
aaagctctttcaaagggaactagagggagcacatctggtttcctgaacattgtgatggag
ttgaaaaagtgctgcaaccactgctaccttatcaaaccacctgaggaaaatgagagagag
aatggcattgagacactgcagtctcttgtcaggagcagtggaaagctaattctcttggac
aagctgctaaccaggctgcgggagagaggcaacagagtgctgatcttctcccagatggtg
aggatgctggacatcttggcagagtatctgactatcaaacactacccttttcagcgcttg
gacggctcaatcaaaggggagatccgaaagcaggcattggaccacttcaacgctgacggc
tctgaggacttctgtttcttgttgtcaacacgagctggagggctgggaattaatttggcc
tctgctgatactgttgttatctttgactcggactggaaccctcaaaatgatcttcaggct
caggctcgggctcaccggattggacaaaagaagcaggtgaatatttaccgcctggtcaca
aagggtacagtagaggaggagatcattgaaagggccaagaagaaaatggtgctggatcac
ttggtaatccagcgtatggacactactggccggactgttctggacaacaactccgggcga
tctaactcaaatcctttcaacaaagaggagctaacagctattctgaagtttggagctgaa
gatctcttcaaggaacttgaaggggaagagtcagagcctcaggagatggacattgatgag
attttgcgtctggctgaaacacgagagaatgaagtgtccaccagtgccaccgacgagctc
ctctcccagttcaaggtggccaactttgcaaccatggaggaggaagagacagagctggat
gagcggtcccagaaggactgggacgatatcattccagaagaacagaggaaaaaggtggag
gaggaagaaaggcagaaagaattggaggaaatctacatgctgcctcgaatccggagctca
acgaaaaaggctcagacaaatgacagtgaatcagatgcagaaactaagagaaggcttcag
agatcatctggatctgaaagtgagaccgatgataccgatgatgagaagagaccaaagcgc
agggggcgtcctcggagtgttagaaaagatactgttgaaggatttactgatgcagaaatc
aggaggtttatcaaggcttacaaaaaatttgggctgcctcttgaacgactggagtgtatt
gcccgggatgctgagctggtggataagtccgtggcagatctgaagaggttaggagaactc
atccacaatagctgtgtgtcagcaatgcaagaatacgaggagcagctgaaagaaaatcca
ggagaagcagggaaaggacctggaaaaaggagaggtcctactatcaagatctccggtgtt
caagtgaacgtgaaatccatcatccagcatgaagaggagtttgaaatgctgcacaaatcc
attcctgctgacccagaagaaaggaaaaagtaccgcctgacatgccgtgtcaaagctgcc
cattttgatgtagactggggagtggaggaggattctcgcttgttagtgggaatttacgag
catggttatggaaactgggagctaattaaaacagatccagaactgaagttatctgataag
atcctacctgttgagacagataagaaacctcagggaaaacagctccagacccgtgttgat
tatctactgaaactgctgaagaaagatctggacaagaaagaaaacatgaaagatggggaa
gagggtaagttaaagaagaggaaaccacgagtaaagaaagagaataaggctcccaaaatc
aaagatgaacatgggaatgaactctcctctcctcggcactcagacaaccagtcagaagaa
ggtgaagtcaaggaggatggcttggaaaagagcccagtgaaaaagaaacagaagaagaaa
gagaacaaagagaacaaggaaaaacagacttccactaaaaaagaaaaggaaagcgataaa
gagaaaaagaagacaaaagacaagaaagaaaagcctaaaggtggtgaagccaaatctgga
agtaaagggaggagatcgcaaggtcccgtccacattacagcagggagtgaaccaatcccc
attggagaagatgaggatgacgatctggaccaagaaacattcagcgtatgcaaggaaagg
atgagacccgtgaaaaaagcactgaagcaacttgataaacctgataagggactaacggtt
caagaacagctggagcatacacgaaactgcctgctaaaaattggggaccgcatctccgag
tgccttaaagcctacagtgaccaggatcttatcaaactgtggagaaggaacctttggata
tttgtgtcaaaattcacagaatttgatgccagaaaactacacaaactctacaagatggct
cataagaagagatcgcaggaagaagaggaacaaaaaaagaaggaggacatgtctagcatg
aagaagccattccgcccagagccttcaggctccagccgcgattcagtgatgtcccagtct
cacatgcctcacaatcctcactcccagaagatgcatctgcctccttcccatgcccagcag
cagatgcatgggcacccacgggacaactatggccatccaaacaaaagacatttcagcaac
acagaccgaggagaatggcagagggatcgaaagttcaactacggtggcaacagcaaccag
atgtggggtggggagcgacatcaccagtatgagcagcactggtacaaggaccatcactat
ggggatcggcgatctcgtggagaccctcaccggagctctggaaactacagaccaaataac
ctctcccgcaagagaccctatgaacagtacaacagtgaccgagaccacagaggccaccga
gattattatgacagacaccaccatgattccaagcgtcgacgatctgatgagttcagacct
cagaactaccaccagcaggatttccgacggatgtctgatcaccgaccacccatgggatac
catggccaaggaccttcggaccactaccggtccttccacacggacaaatcgggagattac
aaacagcctctccctccacctcaccctggagtgtcagaccctcgctcgcccccctctcag
aaatccccccacgattccaagtcacctcttgatcacagatcacctctggataggtcatta
gaacagaaaaacaatccagactataactggaacattaggaaagcataa
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integrated database retrieval system
