Cuculus canorus (common cuckoo): 104063042
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Entry
104063042 CDS
T08597
Symbol
BMS1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104063042 (BMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104063042 (BMS1)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
90S particles
GTPase
104063042 (BMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
nSTAND3
AAA_16
AAA
RNA_helicase
Gly_acyl_tr_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
104063042
NCBI-ProteinID:
XP_053927972
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Position
7:25338833..25362383
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AA seq
1307 aa
AA seq
DB search
MEEKEKKKHRAKHSGPKAEKKRKRYLNDLGIGDEEDARKRNPKAFTVQSAVRMARTFHRT
QDLKTKKHHIPVVDRTPLEPPPVVVVVMGPPKVGKSTLIRCLIKNFTRQKLVEIRGPVTI
VSGKKRRLTIIECGCDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
GVLTHLDTFKNNKQLKKTKKKLKHRFWTEVYPGAKLFYLSGMVHGEYQKQEIHNLGRFIS
VMKFRPLTWQTSHPYVLADRMEELTNPEEVRINPKCDRKISLYGYLRGAHLKNKSQVHMP
GVGDFTVSDVGFLPDPCALPEQQKKRSLNEKEKLVYAPLSGVGGIVYDKDAVYIDLGGSH
AHEKEEEEVRPNHQLVQSLISTHSAIDVKMASSKVSLFRDSRPIGSEDIGQGFVMPKEER
EIDLKTGRVRRKAVFEEEEKENDDALSDEEDNQEEEAAAMSEDGSDEDDEGDAEEESDRE
EEMAVWRAKRLKTEVTKEQAMSELPAFADSDDDLEMSSEGEGKTDLEEDEVEEYDDEEEE
EEQRTYENESSDSEFEAMSKRVAESKQCVIKSVDREIGSQISDHSQKRKAGLTTDSGNCT
AEEASESEVENSSLDEGGDEEGSHDESDVEESNSKGSQYAQAKKADGVRRTKLKAVEADD
DVENLLREEEEYEEKVDLSADTTGALKWKEDLTQKAAEAFLRQQRSTPNLRKLVYGTALE
DEEHESEDAADELGGLFRVSRPDKASRQKANDLDCSKFLIEKPQDWDLEEVMSSIRDCFV
TGKWEDDKDAAKLLEEDEELYGDFEDLETGVVHKGKPAAEGDESGSEEGEDGKMSKPEPE
EEEKKKERMDKKRKLKEMFDAEYDEGDATYFDDLKEEMHKQAQLNRTEFEDQDDETRVQY
EGFRPGMYIRIEIENVPCEFVLNFDPHYPVILGGLGNSEGNVGYVQLRLKKHRWYKKILK
TRDPLILSLGWRRFQTIPMFYIEDHNGRHRLLKYTPQHMHCGAAFWGPITPQGTGFLAVQ
SVSGITPDFRIAATGVVLDLDKSITIVKKLKLTGFPFKIFKNTCFIKGMFNSALEVAKFE
GAAIRTVSGIRGQIKKALRAPVGAFRATFEDKLLMSDIVFVRTWYPVSIPTFYNPVTSLL
KPAGEKDSWSGMKTTGQLRHERGIKVKQNKDSLYKPIVREKRHFNKLHIPKALQKALPFK
NKPKNLEKKGKTPKDQWRPAVIREPHEKKISALLSALSTVNNYKIRKAKVKHREQLKEYL
KVKQKEDEQKFKRQKEAKKKIYRILGQREKKRQKSSLKGSSKGEKSM
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaagagaagaagaagcatcgtgcaaagcacagcgggccaaaggcagagaaa
aaaaggaaacgttatcttaatgacctaggaataggagatgaggaggatgcacggaagaga
aaccccaaagcctttacggtccagtccgctgtgcggatggccagaactttccatagaact
caggacttgaagactaaaaaacatcacattccagtggttgaccgtactcctttggagcct
cctcctgtggtcgtggtggtgatgggccctcccaaggttggaaagagcaccttgataaga
tgtctcattaagaacttcacaaggcaaaagctggttgaaatccggggtcctgttacaatt
gtttcaggtaaaaagcgcaggctgactattattgaatgtggatgtgacattaacacaatg
attgacctggctaaagttgctgacttggttctgatgcttattgatgccagctttgggttt
gagatggaaacgtttgagttcctgaatatttgtcaggtacatggctttcccaaaattatg
ggagttcttacccacctggatacattcaagaacaacaaacaattaaagaagactaaaaag
aagctaaagcacagattctggactgaagtctatccgggtgctaagctgttttatctgtct
gggatggttcacggagaatatcaaaaacaggaaattcacaatttgggacgttttatctct
gttatgaaattccgacctctcacttggcaaacatctcacccatatgttcttgcagacaga
atggaggagctgacaaacccagaagaagttcgcatcaatcccaaatgtgacaggaagata
tcgctttacgggtacttgagaggagcacacctgaaaaacaaaagtcaagttcacatgcca
ggtgtaggagacttcactgtgagtgatgtgggtttcctaccagacccttgtgctctacct
gaacagcagaagaagcgttctttaaatgagaaagagaagctagtctatgcccctctttca
ggagttgggggcattgtatacgataaagatgctgtttatattgaccttggtggaagccac
gctcatgaaaaagaagaggaggaagtgagaccaaatcaccaactagttcagagcctcatc
tccacgcattcagctattgatgttaagatggcatcgagcaaggtttctctcttcagggac
tccagacccataggttcagaagatataggacaagggtttgtgatgccaaaagaagaaaga
gagattgatttgaagactggcagagtacgacggaaggcagtatttgaagaagaggagaaa
gaaaatgatgatgcactaagcgatgaggaagataaccaggaagaagaagcagcagcaatg
tctgaggatggaagtgatgaggatgatgaaggtgatgctgaggaagaaagtgacagagag
gaagagatggctgtttggagggccaaacgtctgaaaacagaggtgactaaagaacaagct
atgagtgaactgccagcatttgcagacagcgatgatgatcttgagatgagttctgaagga
gaaggaaaaactgaccttgaagaagatgaagtggaggaatacgatgatgaggaggaggaa
gaggagcaaaggacttatgaaaatgaaagctcagatagtgaatttgaggctatgagcaaa
agagtagctgaatctaagcagtgtgtaatcaagagtgtggatagagaaattggatcacaa
atctctgatcacagtcagaagagaaaagcaggactcactacagattcgggaaactgcaca
gcggaagaggcatcagaatctgaggttgaaaactcttcacttgatgagggtggtgatgaa
gaaggatcacatgatgaatcagatgttgaagagtcaaatagtaagggatctcaatatgct
caagcaaagaaagctgatggtgttagacggactaaacttaaagctgtggaagctgatgat
gatgtggagaatctactgagagaggaagaggagtatgaagaaaaggtagatctttctgct
gacacgacaggtgcactgaagtggaaagaggaccttacacagaaggcagctgaggccttt
ctaagacagcaacgttcaacccccaatcttcgtaaactcgtatatggaacagctcttgag
gatgaagaacatgaaagcgaagatgcagctgatgaacttggaggtttgtttcgtgtcagc
cgtccagacaaagcatccagacagaaggccaatgatcttgactgctccaaattcctgata
gaaaagccacaagattgggatttagaagaggttatgagcagtattcgagactgctttgtg
actgggaagtgggaagatgataaagatgctgccaaattgttggaggaagatgaagagctg
tacggagactttgaagatcttgaaacgggcgttgtgcacaaaggcaagcctgctgctgaa
ggagatgagtctggaagtgaagagggggaagatggaaaaatgtccaaaccagaacctgag
gaggaggaaaagaagaaggagcgcatggacaagaaacggaaactgaaagaaatgtttgat
gcagagtatgacgaaggagatgccacgtactttgatgatcttaaggaagaaatgcataaa
caagcgcagcttaatcgaacagaatttgaagatcaagatgatgagaccagagtgcagtac
gagggcttccggcctgggatgtacattcgaatagagattgagaatgtcccgtgtgaattt
gtcctgaattttgaccctcattatcctgttatcctgggtggtttaggcaacagtgaagga
aatgtcggctatgtacagttgcgcctgaagaagcaccgatggtataagaagatactgaag
acacgtgatcctttaatcctttcattaggatggaggcgatttcagactatccccatgttc
tacattgaagatcataatgggcgtcatcggcttctgaagtacacaccacagcacatgcac
tgtggagcagctttttggggtcctatcactcctcaggggacaggatttttggcagttcag
tctgtcagtggcataacgcctgatttccggattgctgccacaggagttgtgctcgattta
gataaatccataactattgtaaagaaattaaagctgactggttttccgttcaaaattttt
aagaacacttgttttattaagggaatgtttaactccgcattggaagtggctaaattcgaa
ggtgcagcaatccgtactgtaagtggcatccgaggacagatcaaaaaggcccttcgagct
ccagtgggtgctttcagagcgacatttgaagacaagttactgatgagtgatattgtcttt
gtgaggacttggtatcctgtttctatcccaacattttataaccctgtaacatccttgctg
aagccagcgggtgagaaagatagttggagtggaatgaagactacaggccagctgaggcac
gagcgaggcatcaaagtgaaacaaaacaaggattctctctataagcctatcgtgagggag
aagaggcatttcaataagctccacattcctaaagcactgcagaaggcactgccttttaag
aacaagcctaagaatcttgagaagaaaggcaagactccaaaagaccaatggagaccagct
gttataagggagcctcatgaaaagaagatatcagctctactcagtgctttgagtacagtg
aataattacaagataaggaaagccaaagtaaaacatcgggaacagcttaaagagtatctc
aaagttaagcagaaggaggatgaacagaaattcaagaggcaaaaggaggctaagaaaaag
atctatcgcatactgggacaaagggagaaaaagaggcagaagtcaagcttgaaaggatct
agcaaaggagagaagagtatgtaa
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