Cuculus canorus (common cuckoo): 104063116
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Entry
104063116 CDS
T08597
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104063116
03036 Chromosome and associated proteins [BR:
cuca03036
]
104063116
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104063116
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
Pre-60S particles
Helicases
104063116
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104063116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104063116
NCBI-ProteinID:
XP_053926846
LinkDB
All DBs
Position
7:34097490..34114599
Genome browser
AA seq
722 aa
AA seq
DB search
MPEASQFSAGSDTDSDLECPMETEAAAESGQRRRKKEKKEKKSKRHDKSQKKKTRVDESE
QSEDDLDPPKRKKSKIVAKQNGGVKQNGDAREESPENAKLSSLKIKSTHKKQLSNSSETS
SGDGDSEQEQELTEEQKEGAFSNFPISKGTVQLLQARGVTYLFPVQVKTFNPVYSGKDVI
AQARTGTGKTFSFAIPLIEKLQGDSQDRKRGRSPKVLVLCPTRELANQVAKDFKDITKKL
TVACFYGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQSGKLDLTKVKHVVLDEVDQMLDM
GFAEQVEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKLKYEQIDLIGKRTQKA
ATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSL
HGDIPQKQREITLKGFRNGSFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGR
TGRAGRTGICICFYQRKEEYQLRFVEQKAGITFKRVGVPTATDIIKASSKDAIRCLDSVP
QTAIEYFKESARFLIQEKGPVNALAAALAHISGATSIEQRSLLNSDAGFVTMILRCSEEI
NNMSYAWRKLRDLLGDDVDRKVNRMCFLKGKMGVCFDVPAADQKEIEAKWEDSKQWCLCV
ATELPELVESQRGGGGGGGGGNSRSNSRSFSGSRNGRRGGSGRNNRFRGRGQKRSFDRAF
DR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagccagccagttcagcgccggcagcgacaccgactcggacctcgagtgtcct
atggagaccgaggcggccgcggagagcggccagcggcggcgcaagaaggagaagaaagag
aagaaatctaaacgtcatgacaagtctcaaaagaaaaagactcgggtggatgaaagtgag
cagtcggaggatgaccttgatccaccgaaacgcaagaaatcaaagattgttgctaaacaa
aatggtggagttaaacaaaacggtgatgcgagagaggaaagccctgagaatgcgaaattg
tcttccttaaagatcaaatccacccacaaaaaacaactcagtaattctagtgaaacatcc
agtggggacggtgacagtgagcaagagcaggagctgacagaagaacagaaagagggtgct
ttctccaattttcctatttccaaagggactgttcagcttcttcaagctcgaggagtgacg
tacctttttcctgtgcaagtgaagaccttcaacccagtgtattctggcaaagatgtaatt
gctcaagcacgaactggaacagggaaaacattctcttttgctattcccttaattgaaaag
cttcagggagactcccaggacagaaagagaggccgttcaccaaaggtactagttctttgt
ccgacaagagagttggcaaaccaagttgccaaagatttcaaggacatcaccaaaaagctc
acagtagcttgtttttatggaggaactccatataatggacaaattgatctcatgagaagt
ggcattgacattttggttgggactcctggtcgaatcaaagaccatctccagagtggcaag
ctggacctaaccaaggtgaaacatgttgtactcgatgaagttgaccagatgctggacatg
ggatttgctgagcaagtggaagacattttacgagttgcatacaagaaggattctgaagac
aatcctcagacactactgttttctgcaacctgcccacattgggtgtacgatgtggctaag
aaatacatgaagttgaaatatgaacagattgaccttattgggaaaagaactcaaaaggct
gctacgacagtagagcatttggcgatagcgtgtcactggtctcagagagctgcggttatc
ggagatgtcattcaggtctacagtggcagccacgggaggaccattgtcttttgtgagacc
aaaaaggaggcaaatgagctggctctgaatgcttcaatcaaacaggattgccagtcattg
catggtgacattcctcagaagcaaagagagatcacgctaaaagggtttagaaatggttca
tttaaagttctggttgccaccaacgttgctgccaggggtttagacatccccgaagttgac
ctggttgtacaaagctcaccaccaaaggatgtggagtcctatatccatcggtctggacgc
acgggtcgagctggacggactgggatctgtatctgtttttatcagcgaaaggaagaatat
cagttaagatttgtggaacaaaaagcgggcattacgttcaagcgtgttggtgtccctact
gcaacagatataataaaggcttccagcaaagatgccatcaggtgtctggattctgttcct
caaaccgctattgagtatttcaaagaatctgctcgttttctaatacaagagaagggacca
gttaatgctctggctgcagctctagcccatatctcaggtgctacttccattgaacagcgc
tccctgctgaactcggatgcgggctttgttacaatgatactacgctgctctgaagaaata
aacaacatgagctatgcttggcgaaagctgcgggatctgttgggtgatgatgttgacagg
aaggtgaacagaatgtgtttcctcaaggggaaaatgggtgtgtgctttgacgttcctgca
gcagaccagaaggaaatagaggcaaaatgggaagattcaaaacaatggtgtttgtgcgtg
gcgactgaattacctgagttagtggaatcacagcgaggaggaggaggtggcggcggcgga
ggaaatagccgaagcaatagccgaagcttctcaggctccaggaatgggcgacgtggtggc
tctggtagaaacaacagattcagaggcagaggccagaaacgaagttttgacagagcgttt
gatcgttaa
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