KEGG   Cuculus canorus (common cuckoo): 104063137
Entry
104063137         CDS       T08597                                 
Symbol
TAF12
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
cuca  Cuculus canorus (common cuckoo)
Pathway
cuca03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104063137 (TAF12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cuca03021]
    104063137 (TAF12)
   03036 Chromosome and associated proteins [BR:cuca03036]
    104063137 (TAF12)
Transcription machinery [BR:cuca03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104063137 (TAF12)
   Coactivators
    SAGA/TFTC/STAGA complex
     104063137 (TAF12)
Chromosome and associated proteins [BR:cuca03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     104063137 (TAF12)
    STAGA complex
     104063137 (TAF12)
    TFTC complex
     104063137 (TAF12)
    SAGA complex
     104063137 (TAF12)
    SLIK complex
     104063137 (TAF12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF4 TAF10 DUF5827 DUF6965
Other DBs
NCBI-GeneID: 104063137
NCBI-ProteinID: XP_009563585
LinkDB
Position
22:5625329..5632713
AA seq 212 aa
MASPSTGPTAVADVIKDLDTQIALIGLGPHNPKKKQDLDKLYDLKAKAQQIMNQFGPSTL
INLSNFSSIKPEPASTPPQSSMANSTTVAKMPGTPSAGGRLSPEGNQVLTKKKLQDLVRE
VDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIP
GFGSEEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 639 nt   +upstreamnt  +downstreamnt
atggcttctccatccacgggccccacggcggttgctgatgtaattaaagatctagacacg
cagatagctctgattggtttgggtcctcacaaccccaagaagaagcaggacttagataag
ctttatgatctaaaagctaaagcccaacagattatgaaccagtttggcccatctaccttg
atcaacctctccaatttctcctcgataaagccagaaccagccagcactccaccgcagagc
tccatggccaacagcaccaccgtggccaagatgccggggacgcccagcgcaggagggcgg
ctcagtcccgaaggcaaccaggttttaaccaagaagaaattgcaggacctggtgcgcgag
gtggatccaaatgagcagctggatgaagatgtggaagaaatgctgttgcagatcgctgac
gatttcatagagagcgtggtgacggccgcctgccagcttgcgcggcatcgcaagtcaaac
accctggaggtgaaagacgtccagttacatctcgagcgtcagtggaacatgtggatcccg
ggctttggttctgaagaaatcaggccctacaaaaaagcctgcactacagaagctcacaaa
cagagaatggcactgattcgcaaaacaaccaagaaataa

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