Cuculus canorus (common cuckoo): 104063278
Help
Entry
104063278 CDS
T08597
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104063278 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104063278 (TPR)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104063278 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Imm70
Motif
Other DBs
NCBI-GeneID:
104063278
NCBI-ProteinID:
XP_053929557
LinkDB
All DBs
Position
8:complement(2718578..2758387)
Genome browser
AA seq
2368 aa
AA seq
DB search
MAAVLQQLLERAELAKLPRPVQGKLERFLADQQSEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNETQECQTLREELKKLHEQLKSLSEKNKELEAAQDRNAAIQSHLSREKEEL
EAEKRDLVRTSERRSQEVEHLHEDVKRLNEKLTEANTEKVKLQLKLDELQTSDVSVKYRE
KRLEQEKELLQNQNTWLNTELKAKTDELLHTAREKGNEILELKCNLENKKEEVSRMEDQV
NGLKQSNENLQKHVEDLLNKLKEAKEQQAGMEERFHNELNAHIKLSNLYKSAADDSEAKS
NELTGAVEELHKLLKEAGEANKATQEHLAEVEASKAIMEKELREKISKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVEAQDQLLLEKLENKRIN
KYLDEIVQEVEAKAPILKRQREEFERAQKAVASLSAKLEQAMKEIQRLQEDADKANKNAS
LLERENQRLEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGEAREKEEQETTSSKISDLQNQLGEALSELEKLRESRHHQ
LQLVESIVRQRDMFRILLAQTTGAVIPLQASVILSDDISLTSTPKRPSLPQAMSTPAPVS
MTESVETVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTDLRSQNAKISTQL
EFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMNQDLRAANEKLAVAE
VRAENLKKEKDILKMSDVRLTQQRESLLVEQRGQNLLLTNLRTIQGILERSETETKQRLN
NQIEKLEREISQLKKKLESEVEQRHSLTKNQEVHILDLKRQLETETNRHINTKELLKNAQ
KETALLKQQLNNTEAQLASQSSQRALGKGQPGTNEDVDDLVSQLRQADEQVNDLKERLKT
SSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKESSEYQAQLEKKLMESEKEKQE
LQEEKRKAVENMEQQLSELKKSLSTVQSEVQEALQRASTALTNEQQARRDCQEQAKMASE
AQNKYERELMLHAADVEALQAIKEQVAKSAAVRQQLEEAARKAESELLECKASWEERERM
IKDEASQLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPAAGNVSLNEEGKSQEQIL
EILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREKVQVTAKTIA
QHEELMKKTETMNVLIETNKMLREEKERLEQELQQVQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKSRTQHLLSQQKDTDLEEYRKLLSEKEANTKRIQQMSEETGR
LKAEIARTNASLTTSQNLVQSLKDEVTKIRTEKDTLQKELDAKVADIQEKVKTITQVKKI
GRRYKTQYEELKAQHDKMVAEASTQSFAEQQEEQVSAQEVQELKDTLSQAEVKTKALEAQ
VENLQKTVAEKETEARNLQEQITQLQAELARFHQDLQEKTAQEEQLRQQITEKEEKTRKT
LLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALKSQYEGRICRLERE
LREQQERHHEQRDETPESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVS
TPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVE
HVPVFGSASGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPANQEPSPT
IVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRPREEEEDNTVENSEQIPEETVDVPLP
KKLRSIQRVGPEEEVTAEESTDGEVEAQTYNQDSQDSIGEGVTQGEYTPMEDSEETSQSI
PIDLGPLQSDQQNTCSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQEDYEDEEEEDEDDD
EDTGMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPGTETEESMGGGESNQRAADSQN
SGEGTTSAAESTFPHESSREQQPSSASERQPPRPPQSPRRPPHPLPPRLTIHAPPQELGP
PVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSP
QVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPL
QVAAPVTVFTESASADASEHASQSVPMVTTSTGNLSTTTEAGAGDDGDEVFAEAESEGIT
SEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSNQPKPFRRVRLQPPTLRTG
VRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgctgcagcagctactggagcgcgccgagctcgccaagctgccccggccc
gtgcagggcaagctggagcggttcctggccgaccagcagagcgagatcgacgggctgagg
gccaggcacgagcgcttcaaggtggacagcgagcaacagtactttgaagtagaaaagcgt
ctagctcaaagtcaggagagacttgtaaatgagacgcaagaatgtcaaactctgcgtgag
gagcttaaaaaacttcatgaacagttgaagtcactgagtgagaaaaataaagaacttgaa
gcagctcaggatcgtaatgcagcaatccagagccatttaagtagggaaaaagaagaactg
gaagctgaaaagagagatttggttcgaacaagtgaaagacggtctcaagaagttgaacat
ttacacgaggatgttaaacgcttaaatgagaaacttacagaagcaaacactgagaaggtg
aaacttcagttaaagctggatgaactacaaacatcagatgtttctgtgaagtaccgtgag
aaaaggttggagcaagaaaaagaactactacagaatcaaaacacgtggctgaacactgag
ttgaaagccaaaacagatgaactgctacatactgctagagagaaaggcaatgaaatcttg
gagcttaaatgtaatctggagaataagaaggaggaggtttccagaatggaggaccaggta
aacggcttgaaacaatcaaatgaaaatcttcagaagcatgtggaagaccttttgaataaa
ctgaaggaggcaaaagaacagcaagctggcatggaggaaagattccacaatgagctgaat
gcccacatcaaattatctaatttgtataagagtgctgctgatgattcggaggcaaagagc
aatgaactgacaggagcagtcgaagagctgcataagctcctgaaggaagcaggtgaagct
aataaagcaacccaggagcatttggctgaggtggaagcatcaaaagctataatggaaaaa
gaactgagagagaagatcagtaagctggaaaaggagttggagaatgctaatgatttactg
tctgctacgaagcgtaaaggagccatactgtccgaggaggagctggcagcgatgtctccc
actgctgcagcagtagccaaggtggtcaagccaggaatgaaattaactgagctgtacaat
gcttatgtagaagctcaggatcaattgcttttggaaaagctggagaataagagaatcaat
aagtatttagatgaaatagtgcaggaagtggaagccaaagcgccaatcttaaaacgtcaa
cgtgaagaatttgagcgtgcccaaaaagctgttgctagtctgtctgcaaagcttgaacaa
gccatgaaggaaatccagcgattgcaggaggatgccgataaagccaataagaatgcctct
ctgcttgaaagggaaaaccagagactggaaatacaagtgaaggatctttcacagcagatt
cgcgtccttttaatggagctcgaagaggctagaggcaatcacgtcattcgtgatgaagaa
gtgagctctgctgacatcagtagctcttctgaagtgatatctcagcatctagtctcttac
agaaatattgaagaacttcaacagcagaatcagcgtctcttggttgctcttcgagagctg
ggagaggctagagaaaaagaggagcaagaaacgacatcatccaaaatttctgaccttcag
aatcagcttggggaggccctcagtgagctagaaaaactgcgtgaatcacgtcatcatcag
ctgcagcttgtcgagtctatcgttcgtcagcgggatatgttccgcatattgttggcccag
accacaggagcggtcattccgttgcaagcttcagttatattgtcagacgacatttctctt
acatctactccaaagcgcccaagcttacctcaagccatgtcaactcctgctccggtgtca
atgacagagtcagtggagactgtggaggctaaggctgcgctaaagcagttgcaggaagtt
tttgagaactataagaaagaaaaggcagagaatgacaagttgctgaatgaacaaaatgaa
aagcttcaggaacaggtcacggacttgaggtcacaaaatgcaaagatatccacacagctg
gagtttgcttccaaacggtatgaaatgctgcaggataacgtcgaaggctatcgccgagaa
ataacatcgctgcatgaaagaacccagaaactcacagcaacgactcagaagcaagagcag
ataattaacactatgaatcaagacctgagggcagctaatgaaaagctggcggtggcagag
gtgagagcagaaaacttaaaaaaagagaaagatatcttgaagatgtcagatgtgcgtttg
actcagcaacgtgagtctttactagttgaacaaagaggacagaacctgctgcttactaat
ctgcgaactattcagggaatcctggagaggtccgagacggaaacaaaacaaagactcaac
aatcagatagaaaagctagagcgtgagatatctcagctgaagaagaaactagaaagtgaa
gtggaacaaagacattcccttaccaagaatcaagaggttcatatcctggatcttaagagg
cagctcgagactgagacaaaccgtcacattaacacgaaggaactgctaaagaatgcccag
aaagaaacagcgctgttgaagcagcagcttaacaatacagaggcacagctggcatctcag
tcctcacagagggctctggggaaaggtcagcctggtacaaacgaagatgtggatgatctt
gtaagtcaactcagacaagctgacgaacaagttaatgacctgaaagaaagactgaagaca
agttctagtaatgtggaacagtacagggccatggttcttagcctagaggaatcccttaat
aaggagaaacaagtgacagaggaggttcgcgcaacagttgaagctcgtctgaaggaatct
tcagagtatcaggcacagctggaaaagaagctgatggagtcagagaaggaaaagcaagaa
ctgcaggaggagaagcgtaaagctgtggagaatatggaacagcagctgtcggaactgaag
aagagtctgtcaaccgtgcaatccgaagttcaggaagctcttcagagagccagcactgct
ctaactaatgaacaacaagctagacgggactgccaggaacaggcaaagatggcttccgag
gctcaaaataaatatgaaagggaattaatgctccatgctgccgatgttgaagcgttacag
gccattaaagaacaagttgccaagagtgcagcagtaaggcagcagctagaggaagctgct
cggaaagctgagtctgaattgttggagtgcaaggcctcctgggaagagagagagagaatg
atcaaggatgaagcttcacaacttgcatcccgctgtgaagatttggagaaacagaatcga
ttattacatgaacagctggaaagtctgagtgataagatggtgacctctatgaaagaagcc
atgccagctgcagggaatgtttctctcaatgaggaaggcaaatcccaggaacaaatctta
gaaattcttagattcatacgtcgagaaaaggagattgcagaaactagatttgaggtggcc
caggtggagagtttgcgttaccgtcagcgggtggagcacctggaaagggaactccaggaa
ctgcaggacagtctcaatgctgagagagagaaggtgcaggtgacagcaaaaaccatcgcg
cagcatgaagaattgatgaaaaaaactgagaccatgaacgtactgatagaaactaacaag
atgctaagagaagagaaggagcggctagagcaagagctgcaacaggtccaagcaaaggtc
cgcaagctggaggcagacatcctccctctacaagagtctaatgctgaactgagtgagaaa
agtggaatgcttcaggcagagaaaaagcttctggaagaagatgttaaacgctggaaatcc
cggactcagcacttactgagtcaacagaaggacactgatctcgaagagtatcggaagctg
ctttcagaaaaggaggcaaacaccaagcgtatacaacaaatgagtgaagaaacaggcagg
cttaaagcagaaatagccagaactaatgcatccttgactacaagccagaatcttgtgcag
agcctgaaggatgaagtaactaaaataagaactgaaaaggatactttgcagaaagaactg
gatgctaaagtggctgacatacaggaaaaagtgaaaactataacgcaggtcaagaagatt
gggcgcaggtacaagactcaatatgaggagctgaaagcacagcatgataagatggttgct
gaagcatcaactcagtcttttgctgaacaacaagaagaacaagtttctgcccaggaagta
caagagctgaaagacacactcagtcaagctgaagtgaagacaaaggctttggaggctcag
gttgaaaacttacaaaagactgtagcagagaaggaaactgaagctagaaatcttcaggag
cagataacacagctacaagcagaacttgctcgttttcatcaagatctgcaagagaagact
gcgcaggaagaacagctgaggcaacagatcactgagaaggaagagaaaactaggaagacc
ttgcttgcagccaagcagaagattgcacagttagccggtacaaaagaacagctaacaaaa
gaaaatgaagagtggaagcaaaagagcagctcattagaagaacagaagactgaattggag
gtgcggatgagcgcacttaaatcccagtatgaaggtcgaatctgccgtctggaaagagag
ctcagagagcagcaagagcgacaccatgaacagagggacgagacaccggagtccacgaac
aaggtcccagaacagcagaggcaaatctcactgaagtctactccagcttcaggtgaaaga
ggaattgctagcacttcagatccaccaacagcaaatatcaaaccaactcctgttgtgtca
actccaagtaaagtgactgctgctgcaatggctgggaataaatctactccaagagccagt
atccgtccaatggttactcctgctacagtcactaatcctaccacgactccaacagccaca
gttatgccaacaacacaggtggagacgcaggaagctatgcagtcggaaggacctgtggag
cacgttcccgtctttggaagcgctagtgggtctgtgcgttccaccagtcctaatgttcag
acgtccctgtctcagcccatcttgactgttcagcagcagactcaagcaactgcttttgtg
cagcccactcagcaaagtcaccctcagattgagcctgcgaatcaggagccctcccctacc
atcgtagaggttgtacagagctctcaaatagagaggccctccacttccacagcagtgttt
ggcacagtttcagctaccccaagttcttcactgtctaaacgcccacgagaggaagaggag
gataacactgtagaaaactcagaacagattccagaggaaacagtggatgtacctcttcca
aagaaactgagaagcatacagagagttggacctgaggaggaagtgacagcagaagagagc
actgatggtgaggtggaagctcaaacatacaatcaagattctcaagactcaattggagaa
ggtgttacccagggagagtacactcctatggaggatagtgaagaaacttcccagtctatc
ccgatagatcttggacctcttcagtcagatcagcaaaatacttgttcatctcaggatggt
caatccaaaagagatgatgtcattgtaattgatagcgatgatgaagatgatgatgatgaa
gaaaacgaaggcgagcaggaagactacgaggatgaggaagaagaagatgaggatgatgat
gaagacacagggatgggcgatgaaggtgatgacagtaatgaaggaaccggtagtgctgat
ggtaatgatggatatgaagcagatgatgctgagggtgccgatggtacagaccctggaaca
gaaactgaggaaagcatgggaggaggcgaaagcaaccagagggcagcagattctcaaaac
agtggagaagggaccacaagtgctgcggagtccacttttccccatgaaagttcaagagaa
cagcagccatcgtctgcctcggagagacagcccccccggcccccccagtccccacgcaga
ccgccacatccactgcccccccgactcactattcatgctcctcctcaggagctgggaccc
cccgtgcagcgaatccagatgactcgaagacagtcggtggggcgtggacttcagctcact
cctggtataggtgggatgcagcaacacttctttgatgatgaagacagaacagttccaagc
acaccaacgcttgtagttccgcatcgtacagatgggtttgcagaagccattcattccccg
caggtcgctggagttcccagattcaggtttggaccccctgaagatatgccccaaaccagc
tcaagtcactctgatctcggtcagcttgcgtcacaaggaggtttaggaatgtatgaaacc
ccactattccttgctcatgaggaagagtcaggtggtcgtagcgttcccacaacaccatta
caagtagcagcaccagtgacagtctttacggaaagtgcatccgctgacgcttccgagcat
gcttctcagtctgttccaatggttacgacatcgactggcaatctgtccaccaccacggag
gccggagcgggtgatgatggggatgaagtttttgcagaggcagaatctgaaggaatcact
tcagaagcaggcctagaaatagatagccagcaagaggaagaatctgttcaagcatctgat
gagtcagatcttccttcaactagtcaagatcctccttctagttcatctgcagacacgagc
agtaatcagcctaaaccgttccgacgtgtcaggcttcagccaccgacattgagaactggt
gttcgcggtcgtcagttcaacagacagaggggtgtaactcatgcaatgggcggcagagga
ggcctgaacagaggcaacattagttaa
DBGET
integrated database retrieval system
