Cuculus canorus (common cuckoo): 104063629
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Entry
104063629 CDS
T08597
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104063629 (BHLHE40)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
104063629 (BHLHE40)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
KH_DTX3L
Motif
Other DBs
NCBI-GeneID:
104063629
NCBI-ProteinID:
XP_053932992
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Position
11:complement(11264730..11268517)
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AA seq
409 aa
AA seq
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MERQPPPGCLGKLSALENGDLPGLDFAHMYQVYKPRRGLKRSEDNKETYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIEQQQQKIIALQNG
LQAGDLSSRNLDSSQEMFRSGFQMCAKEMLQYLAKHENSKDLKSSQLVSHLHRMASEVLQ
GGAGRKSGDFPPKMVDLKEKPVSLTKAAEGHGKNCVPVIQRTFAHSSGEQSGSDTDTDSG
YGGELEKSDSKSEQQYFKKDTELNYAVQERISSIKQETEDPPAKRSRLESPEDEVPFGSD
MMGSSSSFLGPHAHQPPLCLPFYLIPPSATAYLPMLEKCWYPASVPVLYPSLPASAAALT
GFMNPDKISPPLLMPQRLPSPIPAHSPIDSSALLQALKQIPPLNLETKD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagcgccagccgccgcccggctgcctgggcaagctgtccgccctggagaacggcgac
ctgccggggctggacttcgcgcacatgtaccaagtttacaagcccaggagggggttaaag
aggagcgaggataataaggagacctacaagttgcctcacaggctgatagagaagaagagg
cgcgacaggattaacgagtgcatcgcccagctgaaggacctgctgcccgagcatctcaag
ctgacgactctaggtcacttggagaaggctgtggttctcgagcttaccttgaagcatgtg
aaagcattaaccaatctcatcgagcagcagcagcagaaaatcattgctttgcagaatggt
ttacaagcaggtgacctgtcatcaagaaaccttgattccagccaggaaatgtttcgatcc
ggtttccagatgtgtgccaaggaaatgctgcaatacctggcaaagcatgagaacagcaag
gacctgaagtcgtcccagctggtcagccatctgcaccgaatggcctccgaggtgctccag
ggcggagccggccgcaagtctggagacttccctcctaaaatggtggacttaaaagagaaa
cccgtctccttgaccaaagcggcagagggacatgggaaaaactgtgtgcctgtgatccag
aggacatttgctcactccagtggggagcagagtggcagcgacacagacacagacagtggg
tacgggggagagctggagaaaagtgactccaaatctgaacagcagtatttcaaaaaggat
actgaactcaactatgctgtccaggagagaataagctctattaagcaagagactgaggac
ccaccagccaaaaggagcaggctggagtcgccggaggatgaggtcccttttggcagcgac
atgatgggctcttccagcagcttcctgggcccccatgctcaccagcctcccttgtgcctg
cctttctatttgatcccaccatccgccacagcctatctgcccatgctggagaaatgctgg
tacccagcgtccgtacctgtcttgtaccccagcctcccagcctctgccgcagcgcttacg
gggttcatgaaccccgataaaatctccccacctctgctgatgccccagagactcccttct
cccataccggcccattcccctatcgactcctcggctctgcttcaagctttgaagcagatt
cctcctttgaacttggaaaccaaagactaa
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