Cuculus canorus (common cuckoo): 104063667
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Entry
104063667 CDS
T08597
Symbol
CCDC174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104063667 (CCDC174)
03041 Spliceosome [BR:
cuca03041
]
104063667 (CCDC174)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104063667 (CCDC174)
Spliceosome [BR:
cuca03041
]
Complex C
Other components
EJC/TREX
104063667 (CCDC174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
104063667
NCBI-ProteinID:
XP_053932979
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All DBs
Position
11:8587410..8600376
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AA seq
671 aa
AA seq
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MDRRKKPLDVAASSLVDLKAELFRKQEQFKKEKILKEAGIFAKSKTANKKPSIWNKQNTG
VANRAEKDVEQKIEEEHILDKSRKKLEEKAKLYEKMTKGDFPDEETEDLYLVDFTQKIID
KQHEVQELHQSEAVKKTSEKETDDEETQPEMEVPPPEDPDEEWVDYVDFLGRSRRCMKKD
LPSLLKMDQELQGKRQVPDGNTLLSEDMRRELQRQQWEKEEEEALRKPMGPIHYEDIREN
EARQLGVGYFAFSRDKELRDKQRATLDMLREQTLDQRTKREQLKEKRKAALDARLSKLRA
RKIKKLREAGLEEEAEKLEKGGEVKDVTAEPEAPRVPAASRKVEVVIQERRDTKPGVPYV
REWDKGKELMFGQWSKKQEELRDERDPEFAPPSDYFMGQKKDDSYRSRNLNSPETSSEKL
EAETVQNQQMPSAQANGSSTEDVPPSVQAHHSNGQDESASAEACGSGTQDAQSSTEDDSS
DDEDMLSSAQAYGYGPHGIPPPIQVYGYGAHGVPPPMQAYGCSTHDMPFPMQAYGYSTQG
MLPPMHPYGYSTHDMPFPMQAYGYGTQDVPPPVHNYCCGTQDVMPSMQACGCGTQDVASS
VQACACSTQDVASSAQACGCSPQDVASSVETCGCSTEDVASSAQTESNDTQNQEPLYQSL
DDMLSYYRQVT
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaggaagaagccgctggatgtggccgcctcctcgttggtagatctcaaagca
gaactcttccgaaagcaagaacaatttaagaaagaaaagatattgaaagaagctggcatc
tttgcaaagtccaaaactgctaacaagaaaccaagtatctggaacaagcaaaacacaggg
gttgcaaatcgagccgagaaagatgttgagcagaagatagaagaggagcatatattagat
aaatcaaggaagaaactagaagagaaagcaaagctgtatgagaaaatgacaaaaggcgac
tttccagatgaagaaactgaggatttgtacctagtggattttactcagaagatcatagac
aaacagcacgaagtacaggagctgcatcagagtgaagctgttaaaaagacttcagaaaaa
gagacagatgatgaggaaactcaacctgaaatggaagtaccaccaccagaggacccagat
gaagaatgggttgattatgttgatttcttgggccgatctagacgctgtatgaagaaggat
ttgccaagtctgcttaaaatggatcaggaacttcaagggaaaagacaagttccagatggg
aatacccttttatctgaagacatgagaagagaacttcagagacagcagtgggaaaaagaa
gaagaagaagccctcagaaaacccatgggacctatacattatgaggacattcgagaaaat
gaggccagacagcttggtgttggttactttgctttttctcgtgacaaagaacttagggat
aaacaacgggcaacactggatatgctaagagagcagacacttgatcagagaactaaacgt
gaacagttaaaagaaaaacggaaggcagctctagatgcaaggctgtctaaacttcgagca
cggaagattaagaaattacgggaagctggattagaggaagaggcagaaaaattggagaaa
ggaggagaggtgaaagatgttactgctgaaccggaagctccaagagttcctgcagcgagt
agaaaagtagaagttgtcattcaggagagaagagatacaaagcctggcgtgccttatgtt
agagagtgggataaaggcaaagagctgatgtttggacaatggtcaaagaaacaggaagaa
ctcagagacgagcgagatccagagtttgcgccaccttctgattactttatgggacaaaag
aaagatgacagttacaggagtcggaatttgaacagtcctgagacttcctctgaaaaatta
gaagcggagacagtccaaaaccaacagatgccatcagcacaggctaacggcagcagcact
gaagatgtaccaccatcagtgcaggctcaccatagcaatggtcaagatgagtcagcatca
gcagaggcctgtggcagtggcactcaagatgcacagtcatcaacagaggatgacagcagc
gatgatgaggatatgctgtcatcggcacaggcttatggctatggtccccatggtatacca
ccaccaattcaggtttacggctatggtgcccatggtgtaccaccaccaatgcaggcttat
ggctgtagcactcatgatatgccatttccgatgcaggcctatggctacagcactcaaggt
atgctgccaccaatgcacccttacggctacagcactcatgacatgccattcccaatgcag
gcttacggctacggcacccaagatgtgccaccaccagtgcacaactactgctgtggcacc
caagatgtcatgccttcaatgcaggcctgtggctgcggcacgcaagatgtcgcatcttca
gttcaggcctgtgcctgcagcacccaagatgtggcatcttcagcacaggcttgcggctgc
agccctcaagatgtggcatcctcagtggagacctgtggctgcagcactgaagatgtggca
tcttctgcacagaccgagagcaatgacactcaaaatcaggagccactttaccaaagtcta
gatgatatgctgtcttattacagacaagtgacttga
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