Cuculus canorus (common cuckoo): 104063684
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Entry
104063684 CDS
T08597
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104063684 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104063684 (TRIP12)
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104063684 (TRIP12)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
HECT type E3
104063684 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
104063684
NCBI-ProteinID:
XP_053929902
LinkDB
All DBs
Position
9:complement(8936657..9010941)
Genome browser
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGVQPQDDAAGRRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHLSKRGCSSSAVSVPQEEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQSTETPLETNKPHTKSKRRHLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTEVLSCIKSGSAVESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEQSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLGTTTTIGTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNSIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggtccagccacaagacgacgcagcaggaagaaggtcacatttagggcaggcaaaa
cataaggctcatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttatctaaaagaggctgtagctcatca
gctgtttcagtaccacaagaagaagatccagagagagtcaacacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaagaaacccaaagcacttcaaagcactgaa
actcctttggaaactaacaagccacatactaaatcaaaaagaagacacttagaccaagaa
cagccgaaatctacacaattgccatcaacgagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagaggttctgtcttgtataaagagt
ggttcagcagttgaatcaactggcgctgaagagaagtcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcgtcttcttca
gcttcaacatcctcctcctcttctgctgttgcttctgcttcttctactgttcctcagggt
gccagagtgaaacagggaaaggaccagaataaggctagacgttcccgttctgcatccagc
cccagtccaagaaggagtagcagggacaaagaacagagtaaaacaggtggctcttcaaag
tttgactgggctgctcgattcagcccaaaagtcagtctccctaaaacaaaactgtctcta
ccaggctcttccaagtcagagacatcaaaacctggaccttcgggactgcaggctaagcta
gcaagtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagtactagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaagatggagttaactcttcagctgcacgtacggatgaggctccccagggg
gctgcagcttctagttctgttgctggagctgtaggtatgacaacttctggagaaagtgag
tcagatgattctgagatgggaagactacaagctctgttagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagcccaacagcttttacaaggtctccaagccactgatgaaagtcag
caactgcaggccgtgattgagatgtgccagctgttggtcatgggaaatgaagaaacttta
ggaggatttccagtcaagagtgttgtaccagctttgataacactgctgcagatggagcac
aactttgacattatgaatcatgcatgccgagccttaacatatatgatggaagcacttcct
cgatcatctgctgtagtggtagatgcaattcctgtcttcttggagaagctgcaagtcatt
cagtgcattgacgtggcagagcaggcgcttacagccttggagatgttatcacgcaggcat
agtaaagccattctacaggcgggtgggttggcagactgtttgctgtacctggagttcttc
agtataaatgcgcagaggaatgccctagccattgctgccaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacccat
caggacaaaaagtctgttgaaagcacttgtctctgttttgcacggctggtggacaacttc
cagcatgaggagaacttgctccagcaggttgcttccaaggacttgttaacaaatatccag
cagctcttggtagtgacgcctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgtcctactcttgcagtccaacttatgaagcaaaat
attgcagaaacgcttcacttcctcctttgcggagcctcaaatgggagttgtcaagaacaa
attgaccttgttccgcgaagtcctcaagaactttatgagcttacttctctcatctgtgaa
ctgatgccttgcctgccaaaagaggggatctttgctgttgataccatgctgaagaaagga
aacgcgcaaaatacagatggtgcaatatggcagtggcgagatgacaggggtctctggcat
ccctataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgag
atcagcctgtctacgcttgggcgtgtctatactattgactttaactctatgcagcaaata
aacgaggatactggaacagcacgtgccattcagcgaaaaccaaaccctttagccaataca
aacactagtggacattcagaattgaagaaggatgatgctcgagcacaattaatgaaagag
gacccagaactggcaaaatcctttatcaaaacgctgtttggtgttctttatgaagtatat
agttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttcaagtcat
attgcctctatgctgtcaagtcaagacctgaagatagttgttggagccttgcagatggca
gagattttgatgcaaaaattacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaagaacttagcagagtctgaggctttgctaacgagcccaccgaaagta
tgcactaatggatcaggaacgctgggtaccactacaacaataggtactggaacagccact
gctgccagtaatgcagctgctgatttgggctctcccagcttacaacacagcagggaggat
tccttggatctgagcccacaggggcgactgagtgatgttctaaagagaaaaagactgcca
aaacgagggccaaggagaccaaaatactctccgccaagagatgatgacaaagtagacaat
caagctaaaagccctacaactactcaatctcctaaatcttccttcttggcaagtttaaat
cctaaaacatggggaagattaagcacacagtccaacagtaatagtattgaaccagcacga
acagcaggagtaagtggtcttgcgagggctgcttccaaggataccatttccaataacaga
gaaaaaattaagggctggatcaaggagcaagcccataaatttgtagaacgttattttagt
tctgaaaacatggatggaagcaatcctgcactaaacgtattacagagactttgcactgca
accgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagc
attgtctcggagtctgacgtctcctcatttgaaatccagcatagtgggtttgttaaacaa
ctgctgctttatttgacatctaaaagtgagaaagatgctgtaagcagggatatcagattg
aaaagatttcttcatgtatttttttcttctccacttcctggagaagaaccccttggaaga
ttagagccattagaaaatgcacctttgttggcgttagtccataaaatgaacaattgcctc
agtcagatggaacagtttcctgtcaaagtgcatgacttccctagtggaaatggaacaggg
agcagtttttctctcaacagaggatcccaagctttaaagttcttcaatacgcatcaatta
aaatgccaactgcagagacatccagactgtgctaatgtgaaacagtggaaaggaggacct
gtgaagattgatcctctggctttggtacaagccatcgaaagataccttgtagttagaggc
tatggaagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaata
gatgaatctttggctgctcaattcttaaattcagggaatgtgagacatagactgcaattt
tacattggagatcacttgctgccatacaacatgactgtgtatcaagcagttaggcagtac
agtttgcaagctgaggaagagagagagtctacagatgatgaaagcaacccgttaggaaga
gctgggatttggacaaaaacgcataccatttggtacaaacctgtgcgagaggatgaagat
ggtaataaggactgtgttggtggtaaaagaggaagagcacaaactgctcccacaaaaacc
tcccctagaaattcgaaaaagcatgatgaattgtggcatgatggtgtgtgcccttcggta
ttaaatcctctagaagtttacctcatatctactccacctgaaaacataacatttgaagat
ccctcactagatgttattcttcttttgagagttttacatgctatcagtcgatactggtat
tatttgtatgataatgcaatctgcaaggagataattccaacctcagagtttatcaacagt
aaactgacagcaaaagcaaacaggcagcttcaggatcctttggtgattatgacaggaaac
ataccaacctggctgacagaacttggaaaaacgtgcccttttttctttccgtttgatacc
cgtcaaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactactg
gatactaatccagaaatcaatcaatcagattctcaggatagcagagtggcaccacgactg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatg
caggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagtcggcaca
ggcctaggccccacgctagagttctatgcacttgtatctcaggaactacagagagcagac
ttaggcctttggaggggagaagaagtgactttagccaatccaaaaggaagccaggaaggt
acgaagtacattcataaccttcaaggcctttttgcacttccttttggtagaacagccaag
ccagctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaag
gcaatcatggattttagactggtggaccttcctcttggacttcctttttataaatggatg
ctacgacaggaaacttccttgacatcacatgacttgttcagtattgatccagtagtagcc
aaatcaatatatcaccttgaagatattgtaagacaaaagaaaagactggaacaagacaaa
acacagaccaaagaaagtctacagtatgcattggaggccctgacgatgaatggctgctca
gttgaagatctaggactggacttcacacttccggggtttcctaacatagagctgaaaaaa
gggggaaaagatacaccagttactatccacaatttagaggaatatctgagattggttata
ttctgggcactaaatgaaggtgttgcaagacagtttgattcattcagagatggatttgaa
tcagtctttcccctcagtcaccttcagtacttctatcctgaggagttggagcagctcttg
tgcggcagtaaaacagacacttgggatgccaagactttgatggaatgttgcaggccagat
cacggttatacacatgacagtcgagcggtgaagtatctctttgaaattctcagcagcttt
gatagtgagcagcaaagactgtttcttcagtttgtgacgggcagccccagactgcctgta
ggaggctttcgaagtttgaatcctcccctgacaattgtgcgcaagacatttgagtctaca
gagaatccagatgatttcttaccctcagtaatgacttgtgtgaactatctcaaattaccg
gactattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
