Cuculus canorus (common cuckoo): 104063695
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Entry
104063695 CDS
T08597
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104063695 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104063695 (U2SURP)
Spliceosome [BR:
cuca03041
]
Complex A
U2 snRNP components
U2 related factors
104063695 (U2SURP)
Complex B
104063695 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
104063695
NCBI-ProteinID:
XP_053929909
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All DBs
Position
9:9549465..9593560
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AA seq
1001 aa
AA seq
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MADKAPGGSQKPSAKVRAPDAVHTTGSADPHPLMESKLKAFSIGKMSAAKRTLSKKEQEE
LKKKEDEKAAAEIYEEFLAAFEGGDGNKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSR
FSDQKNQPSQPSNEKPPSLLMIETKKPTLPKNKNKQTTLPGPLKKGEKEKKKSNLELFKE
ELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVG
DPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRR
DAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRE
RLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMI
MNREINNPMFRFLFENQTPAHVYYRWKLYSILQANAPTKWRTEDFRMFKNGSFWRPPPLN
PYLHGMSEEQETEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEA
AEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFESKLCQIFSD
LNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIMEDKETEE
VPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDTAEDTKK
NEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEEIQNQEEESEDEEDTQSS
KSEEQHMYSNPIKEEMPESKSSVKYSEINEEKRAKLREIELKVMKFQDELESGKRPKKPG
QSFQEQVEHYRDKLLQREKEKEMERERDRDKKDKEKLDSRSKDKKEKEECTPTRKERKRR
HSASPSPSRSSGSRRAKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKGKRSPSG
SRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggcccctggcgggtcgcagaaacccagtgcgaaggtcagagcaccagat
gcagtacacaccactgggtctgctgatccgcatcctctaatggaaagcaaacttaaagca
ttcagtattggcaaaatgagtgctgccaaacggactctaagtaagaaggagcaagaagaa
ttgaaaaagaaggaagatgaaaaggctgctgcagaaatttatgaagaattccttgctgcc
ttcgaaggaggtgatggtaataaagtgaaaacatttgtaagaggaggaatcgttaatgca
tctaaagaagagcatgaaacagatgaaaaacggggtaaaatctacaagccttcatcacga
ttttcagatcaaaaaaatcaaccgagccaaccatctaatgaaaagcctccatccctgtta
atgatagaaaccaaaaagcctaccctccccaaaaacaaaaacaaacaaacaactttgcct
gggcctttgaagaaaggagagaaggaaaagaaaaagagtaatttggaactttttaaagaa
gaattaaagcaaatacaggaggagcgtgatgaaagacataaaacaaaaggtagattgagt
cgttttgaaccaccccagtcggattctgatggccagcgtcgttcaatggatgctccttca
cgaaggaacagatcgtctggtgtgctggatgattatgcaccagggtcacatgatgttgga
gatccaagcacaacaaatttgtatcttggaaacatcaatcctcaaatgaatgaagagatg
ttatgtcaagaatttggacgctttggaccgttagcgagtgttaaaattatgtggccgaga
acggatgaagaaagagcaagagaaagaaattgtggctttgttgcctttatgaacaggaga
gatgcagaaagagcattgaagaatttaaatggcaagatgatcatgtcgtttgaaatgaag
ctaggctggggcaaagctgtacctattccaccacatccaatatacattccgccttctatg
atggagcataccctcccacctcctccgtcaggactgccttttaatgcccagcctagggag
aggttgaagaatcctaatgctccaatgttaccaccaccaaaaaacaaggaagattttgag
aagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaatttgctcgct
ttgatacatcgaatgatagagtttgtggtacgggaagggcctatgttcgaagctatgatc
atgaaccgagaaatcaacaacccaatgttcaggtttttgtttgaaaatcagaccccagcc
catgtatactatagatggaagctttattcaattcttcaggcaaatgctccaaccaagtgg
aggacagaagatttccgtatgttcaaaaatggatcattttggaggccaccaccgctgaat
ccttatttgcatgggatgtcagaagagcaagagacggaagcatttgtggaggaaccaaac
aagaagggtgcacttaaggaagaacaaagggacaaattagaggaaattctgcgtggctta
acacctcggaagaatgatattggtgacgccatggttttctgtctaaataatgcggaagct
gctgaagaaattgtagactgcattacagaatccttgtcgattcttaagactcctcttcct
aagaagattgcaagattatatctagtgtcagatgtgttatacaactcgtcagctaaagtt
gccaatgcttcctactatagaaaattttttgaatcaaaattatgtcagatattctctgat
ctcaatgctacttaccgtacaatacaaggccatttacagtctgaaaatttcaagcaaaga
gtaatgacgtgcttccgagcctgggaggactgggccatctatccagagccgtttctgatc
aaactgcagaatattttcttgggccttgtaaatattatggaagataaagagacagaggaa
gtaccagatgatcttgatggtgctcccattgaggaggagcttgatggtgctccactcgaa
gatgtggatggaattcctattgatgctgctcctattgatgatctggatggagtcccaatt
aaatcgctggatgatgatcttgatggagttcctttggatacggctgaagatacaaaaaag
aatgagcctatatttaaagttgccccttcaaagtgggaagcagtggatgaatcggaactg
gaagctcaagctgttactacttctaagtgggagctttttgaccaacatgaagaatcggag
gaggaggaaattcaaaatcaagaagaagaaagtgaagatgaagaagacactcagagttct
aagtcagaagagcaacacatgtattccaatcctattaaagaagaaatgcctgaatccaag
tcatcagtcaagtattcagaaataaatgaagaaaagcgtgccaaactccgagagatagag
cttaaggtgatgaagtttcaggatgagttagagtctgggaaaagacccaagaagccaggc
cagagttttcaggaacaggttgaacactatagagacaagctgctccagagggaaaaagaa
aaagagatggaaagagagcgggacagagacaaaaaggacaaggaaaaattagactccagg
tccaaagataagaaggaaaaggaagaatgtacgcccacaagaaaagagaggaaaagacga
cacagcgcttctcccagtccatctcgcagcagtggcagtagacgagcaaaatctccatcg
ccgaaatcagaacgctcagagcgctctgaacggtctcacaaagagagttcacgttctcgg
tcatcacataaagattctcccagagatgtcagtaaaaaaggcaagaggtcaccatctggc
tctaggacacccaaaagatcaagacgatcacgatcccggtcccctaaaaagtcagggaaa
aaatccaggtctcagtcccgttctcctcacagatctcacaagaagtcaaagaaaagcaaa
cactga
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