Cuculus canorus (common cuckoo): 104063700
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Entry
104063700 CDS
T08597
Symbol
COL4A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04382
Cornified envelope formation
cuca04510
Focal adhesion
cuca04512
ECM-receptor interaction
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104063700 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104063700 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104063700 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104063700 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
104063700 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
cuca00536
]
104063700 (COL4A3)
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104063700 (COL4A3)
Glycosaminoglycan binding proteins [BR:
cuca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104063700 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104063700
NCBI-ProteinID:
XP_053930496
LinkDB
All DBs
Position
9:8183132..8244522
Genome browser
AA seq
1890 aa
AA seq
DB search
MSLSAGVPITYPCPEGSPLPHPCSGVVVLCPCPGRVPVPHPCPGVPIPRPCPGVAVSASL
PRDVPIPHPCPEGSLSRVPARRGPCPASLPGCPRSRIPAQVPPLSAQPRGRSGGAASPVP
EHVPLPRAHLCSQEGELPAPRSLPGAAEPEAGGAGGERRGAAPPQAVSPPRGAGSAQAGA
KRLPPRQKPRAGAVGGGGQSASGRLXAPRDXGAGMAGRGCPGRRAPPPPLLLLLLLALLW
PRRAAAESCVCKGKSPCFCDGMKGNKGEKGFPGYPGPPGHRGFPGPEGPPGPQGPKGSPG
LTGLVGPKGIRGLPGIPGFSGPPGLPGEPGAAGPPGRSGVPGCNGTKGDQGFPGPPGRRG
APGVPGIAGIKGEKGEPADGYYQEYGAKGDPGLPGTPGLQGAQGPQGYPGELGPHGPPGA
SGLPGNAGPPGPKGLMGLKVIGAKGRKGDTGLTGPPGPPGTVIVTLSGPDNMTELKGEKG
EKGSRGLPGPMGFTGPVGDSQSEKGDQGEPGAQGKPGNEGAPGPPGLPGQRGEQGKPGLP
GRQGPKGMKGNTGPPGACGRTEYYDIVVGEKGDEGPPGPPGPKGQRGMPGPQGPPGGAGR
PGVSRPGLRGPPGFPGLKGTKGEKGQTGLCIVGPPGLPGIIGKPGSVGLPGPPGEPGGVT
FRTGLPGLPGEPGSAGPPGPPGDIGIKGDEAGVCTDCSYIPGIPGLPGSPGPHGQDGMPG
REGTTGPKGSPGSPGAPGFPGAQGPPGFRGDQGRKGSKGEPGYVYPEGPKGERGDPGARG
DRGRKGSSGFLGRPGSKGSKGFKGEKGSAGSKGDRGLPGLPGSLGLPGEMGLPGLPGYGL
PGVRGFKGSKGIPGPPGLPGEAGLKGETSRITPPPPLPGPQGPDGLPGPPGVPGSVGATG
PPGDSGHPGPTGDTGFPGLGFPGNPGPKGDKGSAGGRGSPGCEGKIGDPGRAGNLGQQGE
KGDPGIVIPGEPGRLGSPGGRGFPGSKGDAGFPGLPGLPGHAGHDGDDGPRGDRGLPGVP
GDPGFPGKPAECLIGLPGLPGGQGATGPPGGRGLQGSKGELGPPGMSFPGIYGMPGEHGL
IGLQGNTGLPGPTGQSGRPGIPGVTGSRGEPGMMGFLGFPGHPGVIGRPGSPGIRGSPGF
PGLKGRKGFLGAKGEPGDKGFPGPSETLVGLGTKGEPGLNGVQGRKGLKGAKGDAGVQGP
PGLDGSEGISGLPGVKGFMGLPGIPGGQGFPGAPGNKGDMGVPGPKGQKGSPGFPGPSGD
PGPLGYGGFPGDKGDPGYPSVGPPGEPGPKGDPGPPGVLGRKGEKGSQGHPGEKGVAGPH
GIRGETGGAGIPGKLGPPGGVGAKGLPGCPGQQGVAGPPGAVGEPGKNGLVGERGSKGRD
GMPGPPGGKGEPGAPGRGIPGLRGIPGRKGIKGNMGLPGFPGPPGMKGHQGDQGPVGPPG
LMGPPGFQGTTGMAIPGQKGNRGIAGADGRPGAPGFPGLPGLPTPSMKGSKGARGADGIP
GPTGPAGNIGPPGPKGTEGRAGYPGDRGDSGFRGFPGVKGEKGNQGPPGPYGAEGPRGPK
GHQGPPGVPGKIFSIRGSKGPPGLPGIPGTPGDQGIQGLPGLQGPKGVKGLPGSFGHPGQ
PGLPGPKGDRGFPGPRGQPGLIGFPGLQGLPGLPGAIIASPPRRGFIFTRHSQSTKIPSC
PHGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFSTMPFLFCNTNDVCSFASRNDYS
YWLSAAAVMPVDMAPISGRALETHISRCVVCEGAAMVIAVHSQTTVLPACPEGWMSLWKG
FSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHGRGTCNYYTNSYSFWLASLNPRR
MFRRPVPQTLKAGELENIISRCQVCMKRPV
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctccgcgggggtccccatcacatatccctgcccagaggggtccccgctccca
cacccctgctctggtgtcgttgtcctgtgcccctgtccgggaagggtccctgtcccacat
ccctgcccgggtgttcccattccacgaccctgccccggtgtagctgtttctgcatcccta
cccagggatgtacccatcccgcatccctgcccggaggggtccctgtcccgcgtccctgcc
cggaggggtccctgtcccgcgtccctgcccggctgtccccgctcccgcatccccgcccag
gtccccccgctctccgcgcagccccgtggccgttcgggcggcgctgccagcccggtaccc
gagcacgtcccgctgccccgcgctcacctctgctcccaggagggagagctcccggctcct
cgctcgctgcccggggcggcggagcccgaggcgggaggcgctgggggggagaggagaggg
gcggccccgccccaggctgtgtccccaccccggggcgccggcagcgcccaggcgggtgcg
aagcggctgcccccacgccaaaagccgcgggcgggcgcggtgggggggggggggcagagt
gcgagcggccggctctgagctccgcgggacnggggcgcggggatggcgggcaggggctgc
ccgggccgccgggcgccgccgccgccgctgctgctgctgctgctgctcgccctgctctgg
ccgcgccgcgccgccgccgagagctgtgtatgcaaaggaaaaagtccctgcttttgcgat
ggcatgaaaggtaataagggtgaaaaaggctttcctggttacccaggtccacctggtcat
agaggctttcctggtccagaagggcctccagggccccagggaccaaagggttctccaggg
cttacgggcttagttggacccaaaggtatacgaggcttaccaggaatacctggattttca
ggtcccccaggccttccaggtgaaccgggagctgctggtcctcctgggcgttcaggtgtt
ccaggatgcaatggcacaaagggtgatcaaggttttccaggtcctccaggtagaagaggt
gctccaggtgttccaggtattgctggcatcaaaggagagaagggggagcctgcagatgga
tattaccaagagtatggtgcaaagggtgatcctggattgccaggaacacctggacttcag
ggtgcccagggtccccagggatatcccggggaactcggaccacacggccccccaggagct
tcaggcttgccagggaatgcaggacctcctggacctaagggtcttatgggattgaaagta
ataggagccaaaggaagaaagggtgatactggcttaactggaccccctggaccaccagga
actgttattgtgacgttaagtggaccagacaacatgacggagttgaaaggagagaaagga
gaaaaaggatcaagaggacttccagggccaatgggctttacagggccagttggtgattct
caaagtgaaaagggtgaccaaggagaacctggagcacagggcaaacctggcaatgaaggt
gccccaggcccacctggcttaccgggacaaaggggtgaacagggcaaaccaggactgcca
ggcaggcaaggacctaaggggatgaagggaaacactggtccacctggagcttgtggtcga
acagagtattatgatattgtggttggtgaaaaaggagatgaaggtccccctggacctcca
ggaccaaaaggtcaacgaggcatgcctgggccgcagggtcctcctggaggtgctggtaga
ccaggtgtttcaagacctggtcttagaggtcccccaggatttcctggcctgaaaggaaca
aaaggagagaaaggacaaactggcttgtgtattgtaggccctccaggattacctggtatt
attggcaaacctggttctgttggattaccaggtcctccaggagaaccaggtggagtaacg
tttagaacaggcctaccaggacttcctggagagccagggtctgctggacctccaggacct
ccgggagatattggcattaaaggtgatgaagctggcgtgtgtactgattgcagctatatc
ccaggaatacctggtcttcctggttctcctgggccacatggccaagatgggatgcctggt
agagaaggaacgacaggtccaaaagggtctccaggttctccaggagcaccagggtttcca
ggagctcaaggacctcctggttttagaggagaccaaggacgtaaaggatcaaaaggtgag
ccaggatatgtgtatccagaagggccaaaaggtgagcgaggagatccaggggccagagga
gacagaggaagaaaaggttcgagtggatttctgggaagacctggctctaaaggatccaag
ggttttaaaggtgaaaagggatcagctggttcaaaaggagacaggggactacctggattg
cctggcagtcttggtctacctggagagatggggcttcctggactgccagggtatggacta
ccaggcgtaagaggtttcaaaggctctaaaggaatacctggtccacctggattacctgga
gaagctggtttgaaaggagagaccagcaggataactccaccacctccattaccagggcct
caaggaccagatggtttacctggacccccaggagtgcctggtagtgttggagcgacaggt
ccgccaggtgattcaggacatccagggccaacaggtgacacaggttttccagggcttgga
tttcctggaaatccaggtccaaaaggagacaaaggttctgcaggaggcagagggtcacca
ggctgtgaaggaaagattggagatccaggccgagctggaaatctaggacaacaaggagaa
aagggtgacccaggcatagttattcctggagagccaggtcgactgggttcaccaggaggt
cgtggctttcctggctcaaaaggtgatgctggatttccaggacttccaggcctaccaggg
catgctggacatgatggtgatgacggtccaagaggagatcgtggcttacctggagttcct
ggagatccaggttttccagggaaacctgctgaatgtcttattggcctgccaggtttgcca
ggtggccagggagctaccggtcccccaggaggaagaggtttgcaaggttccaaaggagaa
ctaggtcctcctggcatgagtttcccaggaatctatggaatgcctggggaacatggatta
ataggtcttcagggaaatacaggattacctggacccacggggcagtctggaaggccggga
atccctggtgtgacaggctcacggggagagccaggtatgatgggctttttaggatttcct
ggacaccctggtgtgattgggagaccaggcagcccgggtatcagaggttctcctggcttc
ccaggactaaagggaagaaagggttttcttggagcaaaaggtgaaccaggtgataaaggt
tttcctggaccatcagagacgttggttggtcttggtactaaaggagaaccaggcttaaac
ggtgttcaaggaagaaagggtctcaagggagcgaaaggagatgctggtgtgcaaggtccc
ccaggtcttgatgggtctgaaggaatatcaggtctaccaggtgtcaaaggatttatgggt
cttccagggattcctggaggacaaggattcccaggagcaccaggaaacaaaggggacatg
ggggttccaggtcctaaaggacagaaaggatcaccaggctttccagggccatcaggtgac
cctggtccactgggctatggcggctttccaggtgacaaaggagaccctgggtacccatct
gtggggcctccaggagaacccggtccaaagggagatccaggccccccgggagttttgggc
agaaaaggagaaaaaggatctcaaggtcatccaggagagaaaggggtagcaggaccccat
gggatccgaggggagactgggggtgcaggaataccaggaaagcttggacctcctggaggt
gttggtgcgaaaggattgcctggctgcccaggacaacagggcgttgcaggccctcccggt
gctgttggagagcctggaaaaaatggacttgttggtgaaagaggtagtaaaggtcgggat
ggtatgcctggtcccccaggaggaaagggagaaccaggagcaccagggagaggaatccct
ggccttcgaggtattcctggtcgtaaaggaatcaaaggcaacatgggactgcctggtttt
cctgggccaccaggtatgaaaggtcatcagggcgatcaaggacctgttggacctcctggc
ttgatggggccgcctgggtttcaaggaacaacaggcatggcaattcctggccaaaaaggg
aatagaggtattgctggtgcagatggaagaccaggtgctcctggttttccagggcttcct
ggtcttcccactcccagcatgaaaggaagcaaaggtgctagaggggcagatggcatccca
gggccaacaggcccagccggcaacataggtcctcctggtccaaaaggaacagaaggtcgg
gcaggttatcctggtgatagaggggactctggatttcgtggattccctggtgtgaaagga
gaaaagggtaatcaaggaccccctggaccatatggtgcagaagggccaagggggccaaag
ggccatcaaggtccacctggagtccctggaaaaatattctccatccgaggaagcaagggt
ccccctggactgccaggaattccaggaacgccaggtgaccaaggaattcaagggcttcct
ggactacaaggacctaaaggagtaaaaggtctaccaggaagttttggtcatccaggtcaa
ccaggactgcctggtccaaaaggagacagagggtttccaggaccgagaggacaacctgga
ttgattggctttccaggtctacaagggttacctggattaccaggtgccattattgctagt
ccaccaagaagaggttttatctttactcggcatagtcaatcaacaaagattccttcatgc
ccacatgggacatcgcagatctatgttggctattcgctgctttttgtacaaggaaatgaa
cgagcgcacggacaagatcttgggacagctggtagctgcttgcagagatttagcaccatg
ccattcttattctgtaacaccaatgatgtttgtagttttgcttctcgcaatgattattca
tactggctgtcagctgcagcagtaatgccagtagacatggcaccgatttctggcagggca
ctagagacccatattagcaggtgtgtggtctgtgaaggagctgcaatggtaatagcagtt
cacagccaaacaacggtgcttcctgcatgtccagaaggctggatgtctctctggaagggt
ttttcttttgttatgtatacaagtgccggctcggaagcttctggccaagctttggcatct
cctggatcgtgtttggaagaatttcgagccatcccattcatagaatgccacggcaggggg
acgtgcaactactacacaaattcctacagcttctggttggcatcgttaaatccaagaaga
atgttcaggagacctgtgccacagactttgaaagcaggagaactagaaaacatcatcagc
cgttgtcaggtctgtatgaagagaccagtctaa
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integrated database retrieval system
