Cuculus canorus (common cuckoo): 104063709
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Entry
104063709 CDS
T08597
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104063709 (TRPC1)
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104063709 (TRPC1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
104063709
NCBI-ProteinID:
XP_053930624
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Position
9:9463583..9485481
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AA seq
781 aa
AA seq
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MAALYQSAGPAASASPNKLLALKDVRQVKEDTTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGRMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctgtaccagagcgccggcccggccgcctcggcctcgcccaacaagttgctg
gcgctcaaggatgtgcggcaggtgaaggaggacaccacgctggacgagaagctgttcctg
ctcgcctgcgataaaggtgactattatatggttaagaaactcttagaggagaacagctca
ggtgaaatgaacataaattgtgtggatgtgcttggacgaaatgctgttaccataaccatt
gaaaatgaaaacttggacatactacagcttcttttggattatgggtgccagtcatcagat
gcacttttggtggctattgactcggaagtggtgggagcagttgacatcctactgaatcac
cgcccaaaaagatcctccagaccaaccattgtaaaactcatggaacgcattcagaacccg
gagtactcgacgaccatggacgtagcacctgtcattttagctgctcatcgtaacaactat
gaaattcttaccatgttgctaaagcaagacatatcattacccaagcctcatgctgtaggc
tgtgagtgcacgctgtgtactgcaaagaacaaaaaagatagtctgcgacattccaggttt
cgtcttgacatttatcgatgtttggccagtcctgctttaatcatgttgacagaggaagat
ccgatcctgcgagcttttgaacttagtgcagacttgaaagaattaagccttgttgaggtt
gaattcagaaatgattatgaagagctcgctcaacagtgcaaaacctttgctaaagatttg
cttgcacaagcacggaattcgcgggagctggaagtgattctgaatcacacatctagcgat
gaacatgtagataagcgaggattgttggaagagaggatgaacttaagtcgcctaaaactt
gcaatcaaatataatcaaaaagagtttgtggctcagtcgaactgccagcagttcttgaac
actgtgtggtttggacggatggcaggctatcggcgcaagcacacgtgcaagaaaattttg
actgttttgatggttggcattttctggccagttctgtccttgtgttacttgttagcccct
aaatctcgagtgggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatacttcacgtttctgttattacttaatttgtactctcttgtctacaatgaaaataag
aagaatacaatgggaccagcccttgagagaatagactatcttctgataatctggctaatt
ggaatggtgtggtcagacgttaaaagactgtggtatgatggtttagaagacttcttggaa
gaatctcgtaatcagcttagttttgtcatgaattccctgtatttggcaacttttgctctc
aaagtggttgcccataacaagtttcacgattatgcagaaaggaaggactgggatgcgttt
catcctactttagtggcagaaggtctttttgcttttgctaatgttcttagttatctgcgt
ctcttcttcatgtacacaaccagctctattctgggaccactccagatttcaatgggacag
atgctacaagattttggaaaatttctgggcatgtttcttcttgtcttgttctcgttcaca
attggattgacacaactttatgataaaggattcactgtaaatgaagaaaaggactgcgca
gggattttctgtgaacagcagagcaacgacacattccattcgtttattggcacgtgtttt
gctctcttctggtatatattctccctggcacatgtagccatctttgtcacacgttttagc
tatggtgaagagttacagtcttttgtaggtgctgtaattgttggtacctacaatgtggtg
gttgtgatagtactaactaaactcctcgtggcaatgcttcataaaagttttcagctgata
gcaaatcatgaagataaggaatggaagtttgctcgtgccaagctttggcttagctacttt
gatgacaaatgcacgctacctccacctttcaatgttattccctctcccaagactatctgt
tatcttttcaacagtctcagtaaatggatttgctctcatacatcaagtggcaaagtgaaa
cgtcagaacagcctaaaggaatggagaaatctgaagcaaaagagagatgagaattatcaa
aaggtgatgtgttgcttagttcaccgttacttgacttccatgaggcagaagatgcaaagc
acggatcaggcaactgtggaaaacttaaatgaactgcggcaggacttgtcgaaattccga
aatgaaatgagagacctgcttggctttcgaacttcaaaatatgctatgttttatccacga
aactaa
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