Cuculus canorus (common cuckoo): 104063727
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Entry
104063727 CDS
T08597
Symbol
ZBED1
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104063727 (ZBED1)
04121 Ubiquitin system [BR:
cuca04121
]
104063727 (ZBED1)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
104063727 (ZBED1)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
104063727 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
104063727
NCBI-ProteinID:
XP_053912325
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All DBs
Position
1:complement(72382696..72394499)
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AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTVDPRYELPSRKYFCTKAIPEKYSAI
REIVLKELTEVLWCGISTDMWRSENQNRSYVTVAVHFLSSSSANCLAVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINSKVFGATTDYSKDIVKACSLLDIPVQMPCLGHTFNAGIQ
QAFQLPKLCSLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLEASEWNTIEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENTFRTEEKFFAVSEEPPVKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQIIEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENSRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNVNNNFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccatcagacctaaagttagtggctcacccgaga
gcaaagagtaaagtgtggaagtactttgggtttgataccaacgcagaaggatgcatatta
cagtggaagaagatctactgccgtatttgcatggcacagattgcctattcaggaaacacg
tccaacctttcctaccaccttgagaaaaatcaccccgacgagttctgtgaatttgtgaaa
agtaacactgagcaaatgagggaagcttttgctactgcattttcaaaaatcaaaccagaa
tcatcgcagcaggttgttcaagatagcctcatcatgaagacctaccagaactatgaaaac
aaaaagcatcaggaactcacatctgcagtcatcagcttaatttgcgagggcatgtatcca
gcctctattgttgatgaacccaccttcaaggccctcttgagaacagtggaccccagatat
gaacttccgagccggaagtacttctgtacaaaagctattcctgaaaagtacagtgccatt
agagaaattgtgctgaaagagcttaccgaggttctgtggtgtggcatatccacggacatg
tggaggagtgaaaaccagaacaggtcatacgtaaccgttgcagttcactttctcagcagt
agttctgccaactgcctagcggtgaactcacggtgtttaaaaacgtttgaagtaccagag
gataatactgcagagactattacacgagtcctttatgaaacattcattgagtgggggatc
aattcaaaagtctttggtgctacaacagattacagtaaagacattgtgaaagcttgctct
ctcctcgatattcctgtacagatgccttgtttggggcacacttttaacgcaggaatacaa
caagcttttcagctccccaaactctgcagccttcttgccaggtgccgaaaactggtggag
tattttcagcagtctacagttgcgatgtacatgctgagtgagaagcagaaacagcagaat
attctccactgcatgctggtaagtgaccgtgtttcctggtggggaagcacgctcgctatg
ctgcagcgcctcaaggagcagcagtttgtcatcgcggctgttctcgtggaggacagcaac
aaccatcacctcatgctggaagccagcgagtggaatacaatcgaagggctggtagagctg
ctgcagccgttcaagcaggttgcagagatgatgtctgcttcaaaatacccgacaataagt
atggtgaagccacttctccacatgcttctgaatactaccctgaacatcaaagagaatgat
ttgaaagaaatcagcatggcaaaggaggtgatcgctaaagagttgtcaaccacctaccag
cacactcctgagatagacatgtttctcaatgttgcaactttcttggatccccgctacaaa
aaactgccttttctttcagcctttgagcggcagcaggttgaaaacagagtggtggaagaa
gcaaaaagcctgttggagaaagtaaaggaaaatacctttcggactgaagagaaattcttc
gctgtttcagaagagccccctgtgaaaaaaatcattatctcctctactcctcctcctacc
agtgtcatcaacaacatgcttgcagaaatcttttgccagacaggaggagtggaagaccag
gaggaatggcatgctcagatcattgaggagctgagcaacttcaagtcacaaaaggtcctt
ggtttgaatgaagacccgctgaagtggtggtctgacagactagcactgtttccagtttta
ccaaaggttcttcaaaaatactggtgcattctggccacaagggtcttccccgaacgcctt
tttggttcttctgctaatgttgtaagtgcaaagagaaaccggttagccccagctcatgtg
gatgagcagatctttttgtatgaaaacagtcggaatgggtctgaggcagaaccggaggat
gaagacgaaggagaatggggtttggaacaggaacagatttttaatttaaatgactcagta
aatgtaaacaacaatttctttaatatccgagacagtggatttgtttaa
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