Cuculus canorus (common cuckoo): 104063778
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Entry
104063778 CDS
T08597
Symbol
REXO5
Name
(RefSeq) RNA exonuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104063778 (REXO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104063778 (REXO5)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
Pre-60S particles
RNases
104063778 (REXO5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
EzrA
Spc25_N_drosophila
CCDC3_C
Na_H_antiport_3
Motif
Other DBs
NCBI-GeneID:
104063778
NCBI-ProteinID:
XP_053936882
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All DBs
Position
15
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AA seq
775 aa
AA seq
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MAAVGIALNGRKRPAGRLQAREAAREAKRKRRRAAGGGPEEKSSRLSAALFGEDCEISRD
QLYELLKYAALGKCHNATQPSWCRIYHQSHLAGVVVIVLHEMSQLHFYKFYLQFKHLRKV
FRHRFILTPSTNFLASLCGEGGNLKAQNTAKGLTSTGSDCIPKSSDLQHDPIIRKYGGKK
QGLTSYTLTLEEQKKNDYPVKDSPGCKGYVYTECDQPRTDSSPLFGLDCEMCLTAKGNEV
TRVSLVDAQGQCLLNELVKPESTVLNYRTRFSGITKKMLLPVKTRLPEIQTRLKKMLPRD
AVLVGHSLNGDLQALEMIHPSVIDTSLLFARNEGRRFKLKFLAKAVLGKEIQSEEKLGHD
PAEDARAALELAQFFIEQGPAKVAELNLEMLLTTEKLAEVSQNKAALQPQGCSIQKQLNE
PPHLPKPCFLDCLQVTGQKPLLLGRQELDSSDLHQSNMSTPNKQILERALEDVPLSTFSI
VQFSLGPEYVASHLLAGLCEKVRSKLTDMLTIYAGPFEESFCLKSVKKEFGRCGPIQCVT
VVTETNQPYVCVQYEVLEAAQLAVESLNGAEVAGSCIKVQRPVTAAMLDCDVLIKELELD
VENEGVIYVAGLKKSLTETDLQEEFSQLKDLETLFLPKDLQTGKHRNCCFLKFQKSQSAV
DALEVINGWTVKGSKLSSRNALASGHLWRWIWQMNHSNGKQRGNSLYEKMEQLSDREQDL
RKEVKKLDQHIKKIYRRLQNNTLCVVLFPGVNSMCGSQSGLGLMGIKDDGGRNAC
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgggcatcgcgctcaacgggcggaagaggcccgcggggcgtctgcaggcc
cgggaggcggcccgggaggccaagaggaagaggaggagagcggcgggcggaggccccgag
gaaaagtcatctcgcctgtcagcagctttatttggcgaggactgcgaaatcagccgtgac
cagctgtatgagttattaaaatatgcggctttgggaaaatgccacaatgcaacacaaccc
agttggtgccgtatttatcaccaaagccacctggctggggttgtggttattgttctacat
gaaatgagccaactccatttctacaaattctatttgcagttcaaacacctcaggaaagtc
ttccggcatagattcatattaacaccttccaccaacttcctagccagcctgtgtggagaa
ggaggaaacctgaaagctcagaacactgcaaaaggtttgacctccacgggcagtgattgt
attcctaaaagctcagacttgcaacatgatcccatcattcggaaatacggaggaaaaaaa
caaggccttactagctatactctaactttagaagagcagaaaaaaaatgactatcccgta
aaagactcccctgggtgtaagggctatgtgtatacagagtgtgatcagccgaggacggac
agcagccccctcttcggcctggattgtgaaatgtgcctcactgcaaaagggaatgaagtc
actcgtgtctctttggtggatgcgcagggtcaatgccttttgaatgaactagtgaaacct
gaaagcacagtattgaactaccgcaccaggttctcaggaatcacaaagaaaatgctgctt
ccagtgaaaacaagactgccagaaatccaaaccagactaaaaaagatgcttccccgtgat
gcagtattggtgggtcattccctaaacggtgatcttcaggctttggaaatgatccacccc
agtgttattgatacttcactgctttttgccagaaatgaaggtcgacgatttaagctaaaa
tttctagccaaagctgttctagggaaggaaattcagagtgaagagaagcttgggcatgat
cctgcagaagatgctagagctgcattggaattggctcagttctttattgagcaaggacca
gcaaaggtagcagaactaaacttggagatgcttctgacaactgaaaaactggctgaggtc
tcacagaacaaagctgcgttacagccacagggatgtagcatccagaaacagttgaatgag
cctccacatttacctaaaccatgttttttagactgcttgcaggtgactggccaaaaaccc
ctccttttgggcagacaggaactggattcttctgatctgcatcagagtaacatgagcact
ccaaacaaacagatacttgagagagccttagaagatgttcctctgtccacattcagtatc
gttcagttcagtttgggtccagagtatgttgcatctcaccttcttgctggactttgtgaa
aaggtgagaagcaagctgactgacatgctgacaatttacgcaggtccttttgaagaaagc
ttttgcctgaagtctgtgaaaaaagaatttgggaggtgtggaccaatccaatgtgttaca
gtggtgactgaaacaaaccagccctatgtctgcgtccaatacgaggtgctggaagctgcc
cagcttgctgtggaaagcctaaatggagctgaggtagcaggatcctgcattaaggtgcag
agaccggtcactgcggcaatgctggactgtgatgttttgataaaggaactagaactggat
gtagaaaacgaaggcgtgatttatgtggcgggtctaaagaagtcattaacagagacagac
ttgcaagaagaattcagccagttgaaagacctggaaacactgttcctgccaaaggatctc
cagactggaaagcacaggaactgctgtttcctcaaattccagaaatcacagagtgctgtg
gatgcccttgaagttataaacggatggactgtgaagggtagcaaactaagtagtaggaat
gctcttgcttcgggtcacctctggagatggatttggcaaatgaatcacagcaatgggaag
caacgaggaaacagcttgtatgagaaaatggagcaactgtctgatcgtgagcaggatcta
aggaaagaggtgaagaagctagaccaacatatcaaaaagatttacagaaggctgcagaat
aacaccctgtgtgttgttctctttcctggagtgaacagcatgtgtggatcacaatctggc
cttggtctgatgggaataaaagatgacggagggaggaacgcttgttaa
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