Cuculus canorus (common cuckoo): 104063806
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Entry
104063806 CDS
T08597
Symbol
THUMPD1
Name
(RefSeq) THUMP domain-containing protein 1
KO
K06963
tRNA acetyltransferase TAN1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104063806 (THUMPD1)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
104063806 (THUMPD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
THUMP
Saw1
DUF1796
RNase_P_Rpp14
Motif
Other DBs
NCBI-GeneID:
104063806
NCBI-ProteinID:
XP_053936346
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All DBs
Position
15:15466954..15472771
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AA seq
314 aa
AA seq
DB search
MAAAEARKRRPKGHFAAGRAKRPRGGGRQLEAGMRGILITCNMNERKCVGEAYSLLGEYG
DRLYGPEQFSDPEERLSGSEREEDEDDVEAALKKEVGQIRTLTEQKLRRFQSVESGANNV
VFIRTQGIEPENLVHHILKDMHATKKKKTRVILRMLPVSGTCKAFMEDMKKYTETFFEPW
FKAPKKGTFQIVYKARNNSHMSREEVIKELAGIVGSLNPENKVDLNNPQYTIVVEIIKSV
CCLSVVRDYVLFRKYNLQEVVKSKEDTQQNPSSLTEEQNSELVKPETVEEEEEKEKSSNE
VKQENNHGEGEELK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggaggcgcggaagcggcggcccaagggtcacttcgcggccgggcgggcc
aagcggccccgcggcggcgggcggcagctggaggccggcatgcgcggcatcctcatcacc
tgcaacatgaacgagcgcaagtgcgtgggggaggcctacagcctcctcggcgagtacggg
gaccggctctacgggcccgagcagttttcagatcccgaggagcggctgtctggaagcgag
agggaggaggatgaggatgatgttgaggctgccctgaagaaggaggtcggccagatccgc
accctaacggagcagaagctgcggcggttccagtcggtggagagcggtgccaacaatgtg
gtcttcatcagaacccagggcatagaacctgagaacctggtgcaccatatattaaaggat
atgcatgccactaaaaagaagaaaacaagagtcattctgcgcatgctgcccgtttctgga
acttgcaaggcttttatggaagatatgaaaaaatacacggaaacgttttttgagccttgg
tttaaagcccctaagaagggtacttttcagattgtttacaaagctcgtaataacagtcat
atgagtagggaagaagtaattaaggaattggcaggaattgtgggaagcctcaatccagaa
aacaaagtcgatcttaataacccacaatatacaattgtggtggaaataataaaaagcgtc
tgttgcttgagtgtggtgagagactatgttctgtttagaaagtacaatctacaggaggtg
gtgaagagcaaagaagacacacaacaaaacccatcaagtctgacagaagaacagaactcg
gagctagtaaaaccagaaactgtggaggaggaggaggagaaggagaagagctcaaatgaa
gtaaaacaagagaacaaccacggagaaggagaagagctcaaatga
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